Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 107 1e-18 seq5 102 5e-17 seq2 98.7 6e-16 seq3 96.9 2e-15 seq4 93.3 3e-14 seq7 87.8 1e-12 seq8 86.0 4e-12 >seq6 Length=32494073 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || |||||||||||||| ||||| | || | || |||| Sbjct 7250704 CAAGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAGTCAGCTAGTGTGCGACCATC 7250763 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 7250764 CTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 7250823 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || ||||||| | || | || | |||||| || | || || || Sbjct 7250824 CTGAATTTTAGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCAACTTCTAGAGTAATCGT 7250883 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| ||||| ||||| ||||||||||||||| Sbjct 7250884 CTTTCCGGTGAGGGTCTTGACAAAGATCTGCATA 7250917 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || | ||| |||||||||| || || || || ||||| ||||| | Sbjct 7251374 CCTCCACGTAAACGCAAGACCAAGTGAAGCGTAGACTCCTTTTGGATGTTGTAGTCAGCG 7251433 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || || || ||||| ||||| || | | ||||||||| | || Sbjct 7251434 AGAGTACGCCCATCTTCAAGTTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGG 7251493 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| ||| ||| | |||| || | || || Sbjct 7251494 ATTCCCTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTTCCACC 7251553 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| ||||| ||||| ||||||||||| || ||||||||||| Sbjct 7251554 TCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 7251600 Score = 102 bits (112), Expect = 5e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || ||| ||||| ||||| ||||| | | | | || |||| Sbjct 7250932 CAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATC 7250991 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 | |||||||| || || || || || || |||||||| | || | ||||||||||| Sbjct 7250992 CTAAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 7251051 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || ||||||| | || | || | ||| || || | || ||||| Sbjct 7251052 CTGAATTTTAGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCTACCTCTAGAGTGATGGT 7251111 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||||||||| ||||||||||||||| Sbjct 7251112 CTTGCCCGTGAGAGTCTTGACAAAGATCTGCATA 7251145 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || || || ||||| ||||| | | | | || | || || Sbjct 11637217 ACCAAGTGAAGCGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTACGACCGTCTTCG 11637158 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || | || |||||||| | || | ||||||||||| Sbjct 11637157 AGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGG 11637098 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | || | ||| | ||||| |||| ||| ||||| ||| Sbjct 11637097 ATCTTGGCTTTGACGTTGTCAATGGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTTT 11637038 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 11637037 CCGGTAAGTGTCTTCACGAAGATCTGCAT 11637009 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || | ||| |||||||||| ||| || || |||||||| ||||| | Sbjct 11637463 CCTCCACGCAGACGCAACACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCT 11637404 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | || | || || ||||| || || || || || || |||||||| || | || Sbjct 11637403 AAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGGA 11637344 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || ||||| || ||||| ||||||| | || | || | ||| || Sbjct 11637343 ATGCCTTCCTTATCCTGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTCTCCACC 11637284 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | |||||| || || || ||||| ||||| || |||||||||||| Sbjct 11637283 TCTAGGGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCATA 11637236 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||| ||||| ||||| | | | | || |||| || Sbjct 11637673 ACCAAGTGAAGGGTTGACTCTTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCG 11637614 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | || ||||| || Sbjct 11637613 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGG 11637554 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | || ||||| || Sbjct 11637553 ATCTTGGCCTTGACGTTATCAATAGTGTCGGAGCTCTCCACCTCCAGCGTGATGGTCTTG 11637494 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||||||||||||||| Sbjct 11637493 CCGGTAAGAGTCTTCACAAAGATCTGCAT 11637465 >seq5 Length=39062406 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | ||| | || || ||||| |||||||| || Sbjct 25970313 TCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 25970372 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | || |||||||| ||||| ||||||| Sbjct 25970373 ATGAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTG 25970432 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||||| |||| ||| || || || ||||| || || ||||| Sbjct 25970433 TCGATGGTGTCGGAGGATTCAACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACG 25970492 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 25970493 AAGATCTGCATCTT 25970506 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| | ||| ||| | |||| |||| ||| ||||||||||| Sbjct 24281389 TCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAAG 24281330 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | |||||||| | || | ||||||||||| ||||| ||| || Sbjct 24281329 ATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTAGCTTTAAC---- 24281274 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| ||| ||| || || | || || || ||||| || |||||||| Sbjct 24281273 GTTATCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAGAGTCTT 24281214 Query 34967 CACAAAGATCTGCATA 34982 |||||||| |||||| Sbjct 24281213 GACAAAGATTTGCATA 24281198 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||||| | | ||| | || || ||||| |||||||| || Sbjct 6898078 TCTTTCTGGATGTTGTAGTCGGCCAATGTTCTACCGTCCTCGAGCTGCTTTCCGGCGAAG 6898019 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | || | || |||||||| |||||| ||||||| Sbjct 6898018 ATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTGAATCTTGGCTTTGACGTTG 6897959 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | || || |||| ||| ||||| ||||||||||||||||| || Sbjct 6897958 TCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACG 6897899 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 6897898 AAGATTTGCAT 6897888 >seq2 Length=44367670 Score = 98.7 bits (108), Expect = 6e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 |||||| |||| | | ||||| ||||| || || ||||| ||||| ||||| | Sbjct 7316048 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 7315989 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| | | | || |||||||| || ||||| || || ||||| ||||| || | || Sbjct 7315988 AAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGG 7315929 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | || |||||||| ||||| |||||| | |||| || | || || Sbjct 7315928 GATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATCGTGTCTGATGATTCGAC 7315869 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 || | |||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 7315868 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTTCGT 7315815 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| | ||| ||| | |||| || || || || |||||||| Sbjct 25764265 TCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCGAGTTGCTTACCGGCAAAG 25764324 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | |||||||| | || | ||||||||| || ||||| |||||| Sbjct 25764325 ATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTATCCTGGATCTTGGCCTTGACGTTG 25764384 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | || || || |||||||| | |||||| ||| Sbjct 25764385 TCGATGGTGTCAGAGCTCTCCACCTCCAAAGTGATCGTCTTTCCCGTCAAAGTCTTGACA 25764444 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 25764445 AAGATCTGCATA 25764456 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || || ||||||||||| ||||| | | | | || |||| Sbjct 25763787 CAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCCAAGGTGCGACCATC 25763846 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || || || || || || || ||||||||| | || | ||||| ||||| Sbjct 25763847 CTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCCTCTTTGTC 25763906 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || |||||| |||| | || | ||| || || | || ||||| Sbjct 25763907 CTGAATTTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCCACTTCTAGAGTGATGGT 25763966 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | ||||| ||||| ||||||||| Sbjct 25763967 CTTTCCTGTCAACGTCTTGACAAATATCTGCATA 25764000 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||| | ||||||||||| || || ||||| || || ||||| | | | | | | Sbjct 25764468 CCTGAGAACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAGTCAGCCAAGGTCCTGCC 25764527 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| |||| || |||||||| || || || | ||||| || | || | || ||||| Sbjct 25764528 ATCTTCCAATTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTT 25764587 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 || ||||| ||| ||| | |||| ||| | || || |||| ||| || Sbjct 25764588 ATCCTGGATCTTGGCTTTAACGTTGTCGATCGTGTCAGAGCTTTCCACCTCGAGGGTGAT 25764647 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| |||||||| ||||| ||||||||||| Sbjct 25764648 GGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 25764683 >seq3 Length=44396707 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 10/218 (5%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||||| ||| ||| || |||||||| ||||| | ||| | || |||| Sbjct 19894125 AAGACCAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGCAAGAGTACGCCCATCT 19894184 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || || ||||| ||||| || | | |||||||| | || | |||||||| || Sbjct 19894185 TCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGAATACCCTCCTTATCC 19894244 Query 34890 CTAATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTA 34944 |||||| ||| || |||| |||| | | | ||| || || | || | Sbjct 19894245 TGAATCTTGGCTTTAACATTGTCGATGGTATC---TGAACT--CTCCACCTCCAAAGTAA 19894299 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||||||||| || | |||||| ||||||||||||||| Sbjct 19894300 TGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCATA 19894337 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| | ||| ||| | |||| |||| ||| ||||||||||| Sbjct 21554521 TCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAAG 21554580 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | |||||||| | || | ||||||||||| ||||| ||| || Sbjct 21554581 ATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTAGCTTTAAC---- 21554636 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| ||| ||| || || | || || || ||||| || |||||||| Sbjct 21554637 GTTATCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAGAGTCTT 21554696 Query 34967 CACAAAGATCTGCATA 34982 |||||||| |||||| Sbjct 21554697 GACAAAGATTTGCATA 21554712 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||| | ||||||||| | || ||| ||||| ||||| || || | ||| ||| | Sbjct 19894349 CCTGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGCCAGGGTTCTGCC 19894408 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 || |||||||| || ||||| || || || | |||||| || | || | || ||||| Sbjct 19894409 GTCTTCCAGCTGCTTCCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATGCCTTCCTT 19894468 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 || |||||| ||| ||| | || | || | || || |||| ||| || Sbjct 19894469 ATCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCGGAGTTTTCCACCTCGAGGGTGAT 19894528 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| ||||||||||| || ||||||||||| Sbjct 19894529 GGTCTTTCCTGTGAGAGTCTTAACGAAGATCTGCAT 19894564 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | ||| | || || ||||| |||||||| || Sbjct 26086636 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAG 26086695 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| ||||| || Sbjct 26086696 ATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT 26086753 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || |||| ||| || || || ||||| || ||||| Sbjct 26086754 --TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTCTT 26086811 Query 34967 CACAAAGATCTGCAT 34981 ||| ||||||||||| Sbjct 26086812 CACGAAGATCTGCAT 26086826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| || || | |||| | || |||| || Sbjct 19893672 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGACCATCCTCA 19893731 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | | |||||||| | || | ||||| ||||| Sbjct 19893732 AGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGG 19893791 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | || | || | |||||| || | || ||||| || Sbjct 19893792 ATCTTGGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCAACTTCTAGAGTGATGGTCTTG 19893851 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||||||||| |||||||||||| Sbjct 19893852 CCAGTGAGAGTCTTCACGAAGATCTGCATA 19893881 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||||||||| ||||| | ||| ||| | |||| Sbjct 19911944 CAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATC 19912003 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || |||||||| || | | |||||||| | || | ||||| ||||| Sbjct 19912004 CTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCTTTGTC 19912063 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | || | || | ||| || || | || || || Sbjct 19912064 TTGGATCTTTGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATAGT 19912123 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| | ||||| |||||||||||||| Sbjct 19912124 CTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 19912156 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || |||||||||||||| || || | || ||| | || Sbjct 19893896 CAAGACCAAGTGAAGCGTAGACTCTTTCTGAATGTTGTAATCAGCCAGTGTTCTGCCGTC 19893955 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||||||||| || |||| ||||||||| | || | || |||||||| Sbjct 19893956 CTCTAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTC 19894015 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| |||| | || ||| || || | || ||||| Sbjct 19894016 TTGGATCTTTGCCTTGACATTGTCTATAGTGTCTGAACTCTCCACCTCCAGAGTGATGGT 19894075 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| || || ||||||||| Sbjct 19894076 CTTCCCGGTCAGTGTCTTAACGAAAATCTGCATA 19894109 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || || || | ||| ||| | || |||||||| |||||||| || Sbjct 19912422 TCCTTCTGGATATTGTAATCAGCGAGGGTTCTGCCGTCCTCCAGCTGCTTTCCGGCGAAG 19912481 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | || | ||||||||||| ||||| ||| ||| Sbjct 19912482 ATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTAACGTTG 19912541 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | || || |||| ||| ||||| ||||| ||||||||||| || Sbjct 19912542 TCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACG 19912601 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 19912602 AAGATCTGCAT 19912612 >seq4 Length=32756842 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | ||| | || || ||||| || ||||| || Sbjct 29446833 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTACCGGCGAAG 29446892 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| |||||| Sbjct 29446893 ATCAGACGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTG 29446952 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || || || |||| |||||| || || |||||||| || ||||| Sbjct 29446953 TCGATGGTGTCGGAGGATTCGACCTCGAGGGTTATTGTCTTACCCGTGAGGGTTTTCACG 29447012 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 29447013 AAGATCTGCATCTT 29447026 >seq7 Length=41685129 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 |||||| |||| | | |||| ||||| || || ||||| ||||| ||||| | Sbjct 26880630 TCCTCCTCTCAGGCGTAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 26880571 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 || | | | || || ||||| || ||||| || || ||||| ||||||||| |||| Sbjct 26880570 CAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCTGGCGG 26880511 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | ||| |||||||| ||||| ||||| | |||| || | || || Sbjct 26880510 GATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 26880451 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | |||||| || || ||||| || || ||||| ||||||||||| || Sbjct 26880450 CTCTAGGGTTATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCATTTT 26880400 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || | |||||| |||| ||||| || |||||||| ||||| ||||||| | Sbjct 22363498 CCACCTCTAAGCCTCAAGACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 22363557 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| |||| |||| || || ||||| || || ||||| || | ||||| || | || Sbjct 22363558 AGGGTTCGACCATCTTCAAGTTGTTTACCAGCGAATATCAGCCTCTGCTGATCCGGTGGT 22363617 Query 34875 ACCCCCTCCTTGTC 34888 | ||||||||||| Sbjct 22363618 ATTCCCTCCTTGTC 22363631 >seq8 Length=44809562 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| || ||||| ||||| | ||| | | | |||| || ||||| || ||||| || Sbjct 30325937 TCTTTTTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCTAGCTGCTTCCCGGCGAAG 30325878 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | || |||||||| ||||| |||||| Sbjct 30325877 ATAAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 30325818 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | || || |||| ||| ||||| || || || | |||||| ||| Sbjct 30325817 TCAATCGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTGCCTGTCAAAGTCTTGACA 30325758 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 30325757 AAGATCTGCATA 30325746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324623530778760