Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq1734 82.4 3e-11 >seq1734 Length=1503 Score = 82.4 bits (90), Expect = 3e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628 || ||| ||||||| || || | ||| |||| ||||||||||| || ||||| ||| Sbjct 800 CGGCCCAACAAGCGCCCTGTGAACGCAGACTTGCGGGAGTCCGGCGCGATCGAGCAGGAC 741 Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTATTTCCCGAACAGCGACAGGAAG 45688 || |||||| |||||||||| || || || || ||||| |||| ||| || ||| Sbjct 740 GCGGACATCATCATGTTCGTCTATCGAGACGAGGTCTACAACCCGGACACTGAGTACAAG 681 Query 45689 GGTATCGGCGAAATCCTGATCCGGAAGAACCGGGACGGAGAGATCGGCAGCGT 45741 || | | ||| | | || | ||| ||||| |||| || | ||| | ||| Sbjct 680 GGGGTTGCCGAGTTGATCCTCGGCAAGCACCGGAACGGTGAAACCGGTACCGT 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172749979013940