Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq4 141 1e-28 >seq4 Length=32756842 Score = 141 bits (156), Expect = 1e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 8266 ACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTGCTACCCCTGCC 8325 || || |||| ||||||||||| || || | || ||||| | ||| ||||| ||| | Sbjct 25314953 ACCAAGGAACTATGCATAGCACTAAATAGGAAGCCGCCGAATACACCAGCTACACCTAAC 25315012 Query 8326 ATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAAC 8385 || || || || |||||||||||||| ||||| ||||| ||||| | ||| ||||| || Sbjct 25315013 ATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCTTGAAATACAACCATAAAGTTGAAA 25315072 Query 8386 GTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATACT 8445 |||||||| || ||||||||||| |||| ||| || || ||||||| ||| || | Sbjct 25315073 GTACCAGAGATTCCTAGAGGCATACCATTAGAAAAACTTCCTTGACCAATTGGGTAGATC 25315132 Query 8446 AAGAACACTGC 8456 ||||| || || Sbjct 25315133 AAGAAAACAGC 25315143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615842807877400