Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq4 125 2e-24 >seq4 Length=32756842 Score = 125 bits (138), Expect = 2e-24 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 26264 TGCATAGCAGCGAAAAGAGCTCCACCGAAAACCCCAGCAACACCAGCCATATGGAATGGG 26323 ||||||||| || || || ||||| || ||||| ||||| ||| || |||||| Sbjct 25314965 TGCATAGCACTAAATAGGAAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGG 25315024 Query 26324 TGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATA 26383 ||||| || || || || || ||||| ||||| | ||||||||| |||||||||||||| Sbjct 25315025 TGCATAAGAATGTTGTGCTCAGCTTGAAATACAACCATAAAGTTGAAAGTACCAGAGATT 25315084 Query 26384 CCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGC 26442 || |||||||| |||| | |||||| ||||| || | || || | ||||| || || Sbjct 25315085 CCTAGAGGCATACCATTAGAAAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGC 25315143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147707535866400