Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_022747.1 Length=34145 Score E Sequences producing significant alignments: (Bits) Value seq1239 91.5 3e-14 >seq1239 Length=2566 Score = 91.5 bits (100), Expect = 3e-14 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 15536 GGGGTAGAAAAGTAAGTCTTACGCCACTTTTTATGCGTAGCCATCGCCGAGGCGACTTTG 15595 || || || ||||| ||| ||||||||| ||||| |||||||| ||| || | Sbjct 2042 GGCGTGGAGAAGTAGGTCAGGCGCCACTTTGCATGCGAGGCCATCGCGCTGGCCACCGTC 2101 Query 15596 TTCAGCTCGTCAAACTTGCCGATCCAGAAATACTCATCAATATAAACGTGGCCGTGGTAA 15655 | ||||| | || ||| ||||||||| || || || || |||||||||||||| Sbjct 2102 TGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGATGTAGACGTGGCCGTGGTAG 2161 Query 15656 CTCTGTGCCGTTTTGCCGTTGGTAGAGAGA 15685 ||||| ||||| |||| ||| || |||||| Sbjct 2162 CTCTGCGCCGTGTTGCTGTTCGTCGAGAGA 2191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109139101512030