Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq8 111 1e-19 seq2 107 1e-18 seq4 104 2e-17 seq7 100 2e-16 seq5 98.7 7e-16 seq3 95.1 8e-15 seq6 89.7 3e-13 >seq8 Length=44809562 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || |||||||| || ||||| |||||| | || ||||| | | Sbjct 30326203 ATGCAGATTTTTGTCAAGACCCTCACCGGTAAAACCATCACTTTGGAGGTTGAGAGCTCA 30326262 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | ||| ||| ||||| ||||| | || ||||| || Sbjct 30326263 GACACCATCGATAATGTCAAGGC-AAAGATTCAGGACAAGGAAGGGATCCCACCAGACCA 30326321 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||| || || || || ||||| | ||||||| | | |||||||| Sbjct 30326322 GCAAAGACTCATCTTTGCTGGAAAGCAGCTCGAAGATGGACGCACTCTTGCGGATTACAA 30326381 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| |||||||| Sbjct 30326382 CATTCAAAAGGAGTCCAC 30326399 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || ||||||||||| || || | | Sbjct 30325519 ATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 30325578 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || ||||| || | || || || || Sbjct 30325579 GACACCATCGATAACGTCAAGGCTAAGATCCAGGATAAAGAGGGAATCCCACCGGACCAG 30325638 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| || || || || || | | | ||| | | || |||||| Sbjct 30325639 CAGAGGCTCATCTTTGCCGGTAAGCAGCTCGAGGATGGAAGGACTCTTGCTGACTACAAC 30325698 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| ||||| || | ||| | ||| | |||||| |||| || Sbjct 30325699 ATCCAAAAGGAGTCGACTCTCCATCTCGTTCTCAGGTTGAGAGGTGG 30325745 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || ||||| |||||||| || || || | | Sbjct 30326431 ATGCAGATTTTCGTGAAGACCCTCACAGGCAAAACCATCACTCTTGAGGTGGAGAACTCT 30326490 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||| ||| ||||| ||||| | || || || || Sbjct 30326491 GACACGATTGACAACGTCAAGGCAAAGATTCAGGACAAGGAAGGGATTCCTCCGGACCAG 30326550 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || ||||| || || || | ||||| | | |||||||| Sbjct 30326551 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACGCTTGCGGATTACAAT 30326610 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 30326611 ATTCAGAAGGAATCTAC 30326627 >seq2 Length=44367670 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| |||||||| | |||||||| || |||||| | || ||||| | | Sbjct 25764227 ATGCAGATTTTTGTTAAAACATTGACGGGAAAGACTATCACTTTGGAGGTTGAGAGCTCC 25764168 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | |||||||| ||| | || || || || Sbjct 25764167 GACACCATTGACAATGTCAAAGCCAAGA-TCCAAGACAAAGAGGGTATTCCCCCGGACCA 25764109 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || ||||| ||||| || || | ||| ||| | | |||||||| Sbjct 25764108 GCAGAGGTTGATCTTCGCAGGCAAGCAACTCGAGGATGGACGTACTCTTGCTGATTACAA 25764049 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 25764048 CATCCAGAAGGAGTCTAC 25764031 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || |||||||| ||||| || ||||| || || || || || || Sbjct 7315818 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCA 7315877 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | ||| | || || ||||| ||||| | || || || Sbjct 7315878 TCAGACACGATCGACAATGTCAAAGC-CAAGATCCAGGACAAGGAAGGCATCCCACCGGA 7315936 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||||| | || || ||||| || || |||||||||| | || | | ||| || Sbjct 7315937 TCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAAGACGGGAGGACGCTTGCCGACTA 7315996 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||||| || || ||||| || | || | ||| | | || |||||||| Sbjct 7315997 CAACATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCCGTCTGAGAGGAGGA 7316048 >seq4 Length=32756842 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| || || || || ||||| || || ||| Sbjct 29447026 AAGATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACAATAACCCTCGAGGTCGAATCC 29446967 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| ||||| | || || || Sbjct 29446966 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGAC 29446907 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || || ||||| || || || || |||| |||||| | | ||| ||| Sbjct 29446906 CAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTAC 29446847 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || ||||| || Sbjct 29446846 AACATCCAGAAGGAGTCTAC 29446827 >seq7 Length=41685129 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| |||||||| ||||| || ||||| || || || || || || Sbjct 26880400 AAAATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATAACCCTAGAGGTCGAATCA 26880459 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| ||||| | |||||||| Sbjct 26880460 TCCGACACGATCGACAATGTCAAGGC-CAAGATCCAGGACAAGGAAGGGATCCCGCCAGA 26880518 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || ||||| || || || ||||||| | || | | ||| || Sbjct 26880519 CCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTCGAAGACGGGAGGACGCTGGCCGACTA 26880578 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||||| || || ||||| || | || | || || | || |||||||| Sbjct 26880579 CAACATCCAGAAGGAGTCGACGCTTCACCTGGTGCTACGCCTGAGAGGAGGA 26880630 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| || ||||| || ||||||||||| || || || || | | Sbjct 33846523 ATGCAGATCTTCGTTAAGACACTCACCGGCAAAACGATCACCCTTGAGGTGGAGAGCTCC 33846464 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| || ||| ||||| ||||| | || || ||||| Sbjct 33846463 GACACCATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 33846404 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || || || || |||| | ||| ||| || |||||| Sbjct 33846403 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACTCTAGCTGACTACAAC 33846344 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 33846343 ATCCAGAAGGAGTCGAC 33846327 >seq5 Length=39062406 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||| || ||||||||||| || ||||| ||||| || || | | Sbjct 6897888 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 6897947 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| || ||| ||||| |||||| | || || ||||| Sbjct 6897948 GACACCATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGTATCCCTCCCGATCAG 6898007 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || || || || |||| | || || | ||| |||||| Sbjct 6898008 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGTAGAACATTGGCCGACTACAAC 6898067 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 6898068 ATCCAGAAAGAGTCTAC 6898084 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||| | || ||||| || |||||| | || || || | | Sbjct 24281427 ATGCAAATTTTTGTGAAGACCTTGACAGGAAAGACTATCACTTTGGAGGTGGAGAGCTCC 24281486 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | ||| || || |||||||| ||| | || || || || Sbjct 24281487 GATACCATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCGGACCAG 24281546 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| || ||||| || || | ||| ||| | | ||||||||| Sbjct 24281547 CAGAGGTTGATCTTTGCCGGAAAGCAACTTGAGGATGGACGTACTCTTGCTGATTACAAC 24281606 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 24281607 ATCCAGAAGGAGTCGAC 24281623 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || ||||| ||||||||||| ||||| || | | Sbjct 24281655 ATGCAGATTTTTGTGAAGACCTTGACAGGAAAGACGATCACTCTAGAAGTGGAGAGCTCC 24281714 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || ||||| || Sbjct 24281715 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 24281774 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || ||||| || || || || | || || || | || ||||| Sbjct 24281775 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAT 24281834 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 24281835 ATCCAGAAGGAGTCGAC 24281851 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || || || ||||| || |||||||| | | Sbjct 24281883 ATGCAGATTTTCGTGAAGACCTTGACTGGCAAGACCATCACACTTGAAGTTGAGAGCTCT 24281942 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || || || ||||| | || || || || Sbjct 24281943 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGACCAG 24282002 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| ||||| || |||||||| | |||||| | || |||||| Sbjct 24282003 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 24282062 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 24282063 ATCCAGAAGGAGTCCAC 24282079 >seq3 Length=44396707 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || |||||||| |||||||| | | Sbjct 19893880 ATGCAGATCTTCGTGAAGACTCTCACTGGCAAGACCATCACTCTAGAAGTTGAGAGCTCC 19893821 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || || |||||||| ||| | || || || || Sbjct 19893820 GACACCATTGACAACGTCAAAGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 19893761 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || ||||| || || || || | ||||| | | ||||||||| Sbjct 19893760 CAGAGGTTGATCTTCGCAGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCTGATTACAAC 19893701 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 19893700 ATCCAGAAGGAGTCGAC 19893684 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || || || || |||||||| || || || | | Sbjct 19911928 ATGCAGATCTTTGTTAAGACACTTACCGGGAAGACCATCACTCTAGAGGTGGAGAGCTCC 19911869 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || ||||| || || || || | || || || || Sbjct 19911868 GACACTATTGACAACGTGAAGGCCAAAATCCAAGATAAGGAGGGGATCCCACCGGACCAG 19911809 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || |||||||| || || || | ||||| || | ||||||||| Sbjct 19911808 CAACGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGTCGCACCTTGGCAGATTACAAC 19911749 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || | ||||| || ||| | |||| ||||| Sbjct 19911748 ATTCAGAAGGAGTCAACTCTTCATTTGGTGTTACGTCTGCGTGGAGG 19911702 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || || || ||||| || |||||||| | | Sbjct 21554027 ATGCAGATTTTCGTGAAGACCTTGACTGGCAAGACCATCACACTTGAAGTTGAGAGCTCT 21553968 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || ||||| || Sbjct 21553967 GACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 21553908 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || || || || | ||||| |||| || |||||| Sbjct 21553907 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCTTAGCAGACTACAAC 21553848 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 21553847 ATCCAGAAGGAGTCCAC 21553831 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| || ||||| ||||| || ||||| ||||| || || | | Sbjct 19894564 ATGCAGATCTTCGTTAAGACTCTCACAGGAAAGACCATCACCCTCGAGGTGGAAAACTCC 19894505 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | || || || ||||| | || || ||||| Sbjct 19894504 GACACCATCGACAACGTTAAAGCCAAGA-TTCAGGATAAGGAAGGCATTCCCCCGGATCA 19894446 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || || ||||| || || |||||||||| | || | | ||||||||| Sbjct 19894445 GCAAAGGCTTATCTTCGCCGGGAAGCAGCTGGAAGACGGCAGAACCCTGGCCGATTACAA 19894386 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || | || || ||| | ||| | || || || Sbjct 19894385 CATCCAGAAGGAATCTACTCTCCACTTGGTTCTCAGGCTCCGTGGTGG 19894338 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||||||||| || || || || || || |||||||| || || || | Sbjct 19894108 ATGCAGATTTTCGTTAAGACACTGACCGGGAAGACCATCACTCTGGAGGTGGAGAGTTCA 19894049 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || |||| | | ||||| ||||| | || ||||| || Sbjct 19894048 GACACTATAGACAATGTCAAGGCAAAGA-TCCAAGACAAGGAAGGCATTCCTCCAGACCA 19893990 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| || || || || |||| | || | | |||||||| Sbjct 19893989 GCAGAGACTCATCTTTGCCGGAAAGCAGCTAGAGGACGGCAGAACACTGGCTGATTACAA 19893930 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 19893929 CATTCAGAAAGAGTCTAC 19893912 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || ||||| ||||||||||| ||||| || | | Sbjct 21554255 ATGCAGATTTTTGTGAAGACCTTGACAGGAAAGACGATCACTCTAGAAGTGGAGAGCTCC 21554196 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || ||||| || Sbjct 21554195 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 21554136 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || ||||| || || || || | || || || | || ||||| Sbjct 21554135 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAT 21554076 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 21554075 ATCCAGAAGGAGTCGAC 21554059 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||| | || ||||| || |||||| | || || || | | Sbjct 21554483 ATGCAAATTTTTGTGAAGACCTTGACAGGAAAGACTATCACTTTGGAGGTGGAGAGCTCC 21554424 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | ||| || || |||||||| ||| | || || || || Sbjct 21554423 GATACCATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCGGACCAG 21554364 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| || ||||| || || | ||| ||| | | ||||||||| Sbjct 21554363 CAGAGGTTGATCTTTGCCGGAAAGCAACTTGAGGATGGACGTACTCTTGCTGATTACAAC 21554304 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 21554303 ATCCAGAAGGAGTCGAC 21554287 Score = 86.0 bits (94), Expect = 4e-12 Identities = 79/99 (80%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 |||||||||||| |||||||||||||||| ||||| ||||||||||| || || || || Sbjct 32924387 GACAAAGAAGGTATACCGCCAGATCAACAACGTTTGATATTTGCCGGTAAGCAGCTTAAA 32924328 Query 23764 GACGAACGCAC-TTTAGGCGATTACAACATACAAAAAGA 23801 |||| | || ||| || |||||||| || ||||| Sbjct 32924327 GACGGCCAAACAGCTAGCGGACTACAACATCCAGAAAGA 32924289 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | |||||||| || || ||| | || || || | | Sbjct 19912156 ATGCAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGCTCC 19912097 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| |||| | | |||||||| ||| | || || || || Sbjct 19912096 GACACCATTGACAATGTCAAAGCAAAGA-TCCAAGACAAAGAGGGTATTCCTCCGGACCA 19912038 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||||||||| || || || || | | | ||| | | || ||||| Sbjct 19912037 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGAAGAACTCTTGCTGACTACAA 19911978 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 19911977 CATTCAGAAGGAGTCTAC 19911960 >seq6 Length=32494073 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||||||||| || ||||| || || || | ||| | || || || | | Sbjct 7251372 ATGCAGATTTTCGTTAAGACACTCACCGGGAAGACTAGTACTTTGGAGGTGGAGAGCTCC 7251313 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || || || || Sbjct 7251312 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAG 7251253 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| || ||||| ||||| | || ||| | | ||||||||| Sbjct 7251252 CAGAGGTTGATCTTTGCCGGAAAGCAACTTGAAGATGGGCGTACTCTCGCTGATTACAAC 7251193 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 7251192 ATCCAAAAGGAGTCTAC 7251176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337999115892860