Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12]
2,545 sequences; 402,144,823 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 2e-31
seq4 147 2e-30
seq7 140 3e-28
seq5 138 1e-27
seq6 129 5e-25
seq2 122 8e-23
seq8 107 2e-18
>seq3
Length=44396707
Score = 150 bits (166), Expect = 2e-31
Identities = 173/231 (75%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| ||||| ||||| | || || || || || ||||||||| ||||| |||||||
Sbjct 26086598 CGCCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 26086657
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
||||||||| |||| ||||||||||| |||||||| ||||| ||||| ||||||| |
Sbjct 26086658 CGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGAG 26086717
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTC 41811
| | || ||||||||| ||| || ||| || | || | |||||| |||||
Sbjct 26086718 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAGGACTC 26086775
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || || || || ||||| || ||||| ||||| ||||||||
Sbjct 26086776 GACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTCTTCACGAAGATCTGCAT 26086826
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||||||||||| ||| || || ||||||||||||||| || || |
Sbjct 19911701 GCCTCCACGCAGACGTAACACCAAATGAAGAGTTGACTCCTTCTGAATGTTGTAATCTGC 19911760
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| | || |||||||| ||||| ||||| || || || || ||||||| ||
Sbjct 19911761 CAAGGTGCGACCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCCGGTGG 19911820
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||| || |||||| |||| ||| | | | ||||||| |||||
Sbjct 19911821 GATCCCCTCCTTATCTTGGATTTTGGCCTTC-ACGTTGTCAATAGTGTCGGAGCTCTCCA 19911879
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || || || ||||| || || |||||||||
Sbjct 19911880 CCTCTAGAGTGATGGTCTTCCCGGTAAGTGTCTTAACAAAGATCTGCATG 19911929
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || |||||||| || |||| || || || ||||||||||||||| ||||| |
Sbjct 19911929 GCCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGC 19911988
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || | | || ||||||||||||||||| || |||| | ||| ||||||| ||
Sbjct 19911989 AAGAGTTCTTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGAGG 19912048
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| | ||| |||| | || | ||||||| || | | | |||||| |||||
Sbjct 19912049 AATACCCTCTTTGT-CTTGGATCTTTGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCA 19912107
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || || || || ||||||| |||||| || || ||||||||
Sbjct 19912108 CCTCCAAAGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 19912156
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || ||||| ||| ||||||||||| || || |
Sbjct 19893882 CCACCACGGAGACGCAAGACCAAGTGAAGCGTAGACTCTTTCTGAATGTTGTAATCAGCC 19893941
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || | |||| || |||||||| ||||| || || || | ||| ||||| | |||
Sbjct 19893942 AGTGTTCTGCCGTCCTCTAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCTGGAGGA 19894001
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||| | || | ||||| | || | | | |||||| ||||||
Sbjct 19894002 ATGCCTTCCTTGT-CTTGGATCTTTGCCTTGACATTGTCTATAGTGTCTGAACTCTCCAC 19894060
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || ||||| ||||| ||||||||||||||
Sbjct 19894061 CTCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAAATCTGCAT 19894108
Score = 107 bits (118), Expect = 2e-18
Identities = 167/234 (71%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| ||||||| || || || ||||||||| ||||| ||||| |
Sbjct 19911473 GCCACCACGAAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGC 19911532
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GG 41753
| |||||| | || || |||||||| || ||||| || || ||||| ||||| | ||
Sbjct 19911533 TAAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 19911592
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA-CAGTGTCGCTCGA---C 41809
|| | || |||||||| ||| || ||||| || | || || | ||| |
Sbjct 19911593 GATCCCT-TCCTTGTCTTGGATCTTGGCCTTCA----CGTTATCAATGGTGTCCGAGCTC 19911647
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||||||| || || || ||||| |||| ||||| ||||| || ||||||
Sbjct 19911648 TCCACCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCATG 19911701
Score = 104 bits (114), Expect = 2e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || ||| ||||||||| ||||| ||||| |
Sbjct 21553801 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCT 21553860
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || |||||||| || ||||| || || ||||| ||||| | |||
Sbjct 21553861 AAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGA 21553920
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTC 41811
| || ||||||||| ||| || ||||| || | || | |||| |||| ||
Sbjct 21553921 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTC---TC 21553976
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || | || || || || || |||| ||||| ||||||||||||||
Sbjct 21553977 AACTTCAAGTGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 21554027
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| || || |
Sbjct 19893654 CCACCACGGAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 19893713
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||| ||||| |||| | ||| ||||||| |||
Sbjct 19893714 AGGGTGCGACCATCCTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGAGGA 19893773
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||| |||||| || | || |||| ||| | | | |||||| ||| ||
Sbjct 19893774 ATACCCTCTTTGTCC-TGGATCTTGGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCAAC 19893832
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || || || || ||||| ||||| ||||||||
Sbjct 19893833 TTCTAGAGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCAT 19893880
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || ||||||||||| |||| || || || ||||| |||||||| ||||| |
Sbjct 19894110 CCCCCACGTAGACGTAAGACCAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGCA 19894169
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || ||| | || || || ||||| || || || |||| | ||| ||||| | |||
Sbjct 19894170 AGAGTACGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGA 19894229
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||| ||| ||| | || |||| ||| | | | || || ||||||
Sbjct 19894230 ATACCCTCCTTATCC-TGAATCTTGGCTTTAACATTGTCGATGGTATCTGAACTCTCCAC 19894288
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || ||||| || |||| ||||| || || ||||||||
Sbjct 19894289 CTCCAAAGTAATGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 19894336
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||||| || || || ||||||||| || || ||||| | | ||| || | || ||
Sbjct 21554046 CACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCAGCCAAGGTACGACCATCCTC 21554105
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
|||||||||||| ||||| || || ||||| ||||| | || | || ||||||||
Sbjct 21554106 GAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTG 21554165
Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
||| || |||| ||| | | | |||||| |||||| || | || ||||| |
Sbjct 21554166 GATCTTGGCCTTC-ACGTTGTCAATGGTGTCGGAGCTCTCCACTTCTAGAGTGATCGTCT 21554224
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || |||| ||||| || ||||||||||||
Sbjct 21554225 TTCCTGTCAAGGTCTTCACAAAAATCTGCATG 21554256
Score = 89.7 bits (98), Expect = 5e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||||||||||||||| ||||| | || || | | || || | |||||| ||||| ||
Sbjct 21554520 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAA 21554579
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|||| | ||| ||||||| |||| | |||||||||| || | || |||| ||||
Sbjct 21554580 GATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCC-TGGATCTTAGCTTTAACGT 21554638
Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| | ||||| ||||||||||| || || || || || ||||| ||||| |
Sbjct 21554639 TATCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAGAGTCTTGA 21554698
Query 41850 CGAAAATCTGCAT 41862
| || || |||||
Sbjct 21554699 CAAAGATTTGCAT 21554711
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || |||||||| || |||| || || || ||||||||| ||||| || || |
Sbjct 21554256 GCCACCACGTAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGC 21554315
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || || || ||||| ||||| || |||| | ||| ||||||| ||
Sbjct 21554316 AAGAGTACGTCCATCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 21554375
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813
| | ||| ||||| ||| || |||| ||| | || | | ||| |||||
Sbjct 21554376 GATACCCTCTTTGTCTTGGATCTTG-GCTTTGACGTTGTCAATGGTATCGGAGCTCTCCA 21554434
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || || || || || |||| ||||| || ||||| |||||
Sbjct 21554435 CCTCCAAAGTGATAGTCTTTCCTGTCAAGGTCTTCACAAAAATTTGCAT 21554483
>seq4
Length=32756842
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| ||||| ||||| | || || || ||||| ||||||||| ||||| |||||||
Sbjct 29446795 CGCCACCGCGGAGACGGAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGG 29446854
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
||||||||| |||| ||||||||||| |||||||| ||||| ||||| ||||| | |
Sbjct 29446855 CGAGGGTGCGTCCGTCCTCGAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGTG 29446914
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || ||||||| | || | || || | ||| | | | |||||| || ||
Sbjct 29446915 GGATGCCTTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCG 29446973
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | ||||| || |||||||| || || || ||||| |||||||| ||
Sbjct 29446974 ACCTCGAGGGTTATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATCTT 29447026
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734
||||| ||||| ||||| | | ||| || | || |||||||| || |||||||| |||
Sbjct 27090907 TTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGATC 27090966
Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794
| ||||| || |||| || | || |||||||| ||| || |||| || | |
Sbjct 27090967 AAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTG-GCTTTGACATTGTC 27091025
Query 41795 -ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853
| |||||| ||||||||||| | || || || || || || || || || |||||
Sbjct 27091026 GATGGTGTCGGAGGACTCCACCTCGAGTGTGATGGTCTTGCCGGTTAGGGTTTTCACGAA 27091085
Query 41854 AATCTGCATGTT 41865
|||||||| ||
Sbjct 27091086 GATCTGCATCTT 27091097
>seq7
Length=41685129
Score = 140 bits (154), Expect = 3e-28
Identities = 168/224 (75%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
|| |||| |||||| || ||||| ||||||||| ||||| ||||||| || || | |
Sbjct 26880620 AGGCGTAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCTC 26880561
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTC 41763
|||| ||||||||||| |||||||| ||||| ||||| ||||| |||||| | || ||
Sbjct 26880560 CCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCTGGCGGGATCCCT-TC 26880502
Query 41764 CTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACC 41821
||||||| ||| || ||| || | || | |||||| || || ||||| |
Sbjct 26880501 CTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATCGTGTCGGATGATTCGACCTCTAGG 26880444
Query 41822 GTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||||| || ||||| || || || ||||| |||||||| ||
Sbjct 26880443 GTTATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCATTTT 26880400
Score = 134 bits (148), Expect = 1e-26
Identities = 171/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| || | ||||| | || || || || || ||||||||| ||||| |||||||
Sbjct 18540397 CGCCTCCTCTCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 18540456
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
| ||||||| |||| ||||||||||| |||||||| || || ||||| ||||||| ||
Sbjct 18540457 CTAAGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGGG 18540516
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || ||||||||| || | || || | ||| | | | |||||| || |||
Sbjct 18540517 GGATGCCTTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCC 18540575
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | || || || || ||||| || || || ||||| |||||||| ||
Sbjct 18540576 ACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18540628
Score = 131 bits (144), Expect = 2e-25
Identities = 175/237 (74%), Gaps = 16/237 (7%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| || |||| || || || ||||||||| ||||| |||||||
Sbjct 33845840 GCCACCACGGAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGC 33845899
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753
| |||||| |||| ||||||||||| || ||||| || || ||||| |||||| | ||
Sbjct 33845900 TAAGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCCGGAGG 33845959
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA-CA---GTGTC---GCTC 41806
|| | || |||||||| ||| || ||| |||| | || ||||| |||
Sbjct 33845960 GATCCCT-TCCTTGTCTTGGATCTTGGCCTT----GACGTTATCAATCGTGTCCGAGCT- 33846013
Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||||||| || ||||| ||||| |||| |||||| ||||| |||||||||
Sbjct 33846014 --CTCCACCTCCAGTGTGATCGTCTTACCAGTCAACGTCTTCACGAAGATCTGCATG 33846068
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||| ||||| ||||| | || || | |||| |||
Sbjct 33846315 ACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTTCTGCCGTCCTCG 33846374
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| |||||||| || || | ||| || || | |||| || ||||||||| ||
Sbjct 33846375 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC-TG 33846433
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
| | || |||| ||| | | | |||||| ||||||||| | || ||||||||
Sbjct 33846434 AATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATCGTTTT 33846493
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || ||||| ||||| ||||||||
Sbjct 33846494 GCCGGTGAGTGTCTTAACGAAGATCTGCAT 33846523
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| |||||||||||||| || ||||||||| ||||| ||||| |
Sbjct 33846068 GCCTCCACGCAGACGCAACACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGC 33846127
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || | | || ||||||||||| |||||||| |||| | ||| || || | ||
Sbjct 33846128 TAGAGTTCTACCATCCTCGAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGATCAGGTGG 33846187
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||| | || | || || | ||| | | |||||| |||||
Sbjct 33846188 GATTCCCTCCTTGT-CTTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCA 33846246
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || ||||| || || |||| |||||| || || |||||||||
Sbjct 33846247 CCTCTAGGGTGATCGTCTTTCCGGTCAACGTCTTGACAAAGATCTGCATG 33846296
>seq5
Length=39062406
Score = 138 bits (152), Expect = 1e-27
Identities = 172/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| ||||| ||||| | || || || || || ||||||||| ||||| |||||||
Sbjct 25970275 CGCCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 25970334
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
|||||||| |||| ||||||||||| |||||||| || || ||||| ||||||| |
Sbjct 25970335 CTAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGGTCCGGAG 25970394
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || ||||||||| || | || |||| ||| | | | |||||| || ||
Sbjct 25970395 GGATGCCTTCCTTGTCC-TGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCA 25970453
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | || || || || ||||| || || || ||||| |||||||| ||
Sbjct 25970454 ACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 25970506
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| ||||||| || |||||| |||||| || || || ||||| |
Sbjct 6898343 GCCTCCACGCAGACGCAACACCAAGTGAAGCGTGGACTCCTTTTGGATATTGTAGTCAGC 6898284
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| ||| || |||| || ||||||||||||||||| |||| | ||| ||||||| ||
Sbjct 6898283 CAAGGTACGACCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGTGG 6898224
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||| | || | || || | ||| | | | |||||| ||| |
Sbjct 6898223 GATACCCTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCGA 6898165
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || ||||| || |||| ||||| || || ||||||||
Sbjct 6898164 CCTCTAGAGTGATTGTTTTTCCTGTCAAGGTCTTGACAAAGATCTGCAT 6898116
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| |||||||
Sbjct 6898570 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 6898511
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || ||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct 6898510 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCCGGAGGG 6898451
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814
| || |||||||| ||| || ||| | | | | | |||||| ||||||
Sbjct 6898450 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCA-ATGGTGTCGGAGCTCTCCAC 6898392
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| ||| || || || || || |||||||| || || |||||||||
Sbjct 6898391 CTCCAGCGTGATGGTCTTGCCGGTAAGCGTCTTGACAAAGATCTGCATG 6898343
Score = 104 bits (114), Expect = 2e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || ||| ||||||||| ||||| ||||| ||
Sbjct 24282109 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 24282050
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||| || || || || | ||| ||||| | ||||
Sbjct 24282049 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 24281990
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| || ||||| ||| ||| || |||| ||| | | | ||||| ||| |||
Sbjct 24281989 ATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCAATGGTGTCAGAGCT---CTC 24281934
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || | || || || || || |||| ||||| ||||||||||||||
Sbjct 24281933 AACTTCAAGTGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 24281883
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||||| || || || ||||||||| || || ||||| | | ||| || | || ||
Sbjct 24281864 CACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCAGCCAAGGTACGACCATCCTC 24281805
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
|||||||||||| ||||| || || ||||| ||||| | || | || ||||||||
Sbjct 24281804 GAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTG 24281745
Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
||| || |||| ||| | | | |||||| |||||| || | || ||||| |
Sbjct 24281744 GATCTTGGCCTTC-ACGTTGTCAATGGTGTCGGAGCTCTCCACTTCTAGAGTGATCGTCT 24281686
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || |||| ||||| || ||||||||||||
Sbjct 24281685 TTCCTGTCAAGGTCTTCACAAAAATCTGCATG 24281654
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || | | || ||||| ||||| ||| ||||| ||||| |||||||
Sbjct 6898114 CCACCGCGGAGCCTGAGGACGAGATGAAGCGTAGACTCTTTCTGGATGTTGTAGTCGGCC 6898055
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | |||| ||||||||||| |||||||| || || | ||| || || | ||
Sbjct 6898054 AATGTTCTACCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGG 6897995
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | ||||||||| ||| | || |||| ||| | | | ||||| ||| ||
Sbjct 6897994 ATACCTTCCTTGTCC-TGAATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGCT---TTC 6897939
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| | || || || || ||||| || ||||| ||||| || |||||
Sbjct 6897938 CACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 6897888
Score = 89.7 bits (98), Expect = 5e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||||||||||||||| ||||| | || || | | || || | |||||| ||||| ||
Sbjct 24281390 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAA 24281331
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|||| | ||| ||||||| |||| | |||||||||| || | || |||| ||||
Sbjct 24281330 GATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCC-TGGATCTTAGCTTTAACGT 24281272
Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| | ||||| ||||||||||| || || || || || ||||| ||||| |
Sbjct 24281271 TATCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAGAGTCTTGA 24281212
Query 41850 CGAAAATCTGCAT 41862
| || || |||||
Sbjct 24281211 CAAAGATTTGCAT 24281199
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || |||||||| || |||| || || || ||||||||| ||||| || || |
Sbjct 24281654 GCCACCACGTAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGC 24281595
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || || || ||||| ||||| || |||| | ||| ||||||| ||
Sbjct 24281594 AAGAGTACGTCCATCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 24281535
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813
| | ||| ||||| ||| || |||| ||| | || | | ||| |||||
Sbjct 24281534 GATACCCTCTTTGTCTTGGATCTTG-GCTTTGACGTTGTCAATGGTATCGGAGCTCTCCA 24281476
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || || || || || |||| ||||| || ||||| |||||
Sbjct 24281475 CCTCCAAAGTGATAGTCTTTCCTGTCAAGGTCTTCACAAAAATTTGCAT 24281427
>seq6
Length=32494073
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || ||||| ||| ||||||||||| ||||| |
Sbjct 7250690 CCACCACGGAGACGCAAGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAGTCAGCT 7250749
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||| ||||| || || ||||| ||||||| |||
Sbjct 7250750 AGTGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 7250809
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| |||| |||| ||| | | | |||||| ||| ||
Sbjct 7250810 ATGCCCTCCTTGTCC-TGAATTTTAGCTTTGACGTTGTCAATGGTGTCGGAGCTCTCAAC 7250868
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || ||||| || || || || ||||| || || ||||||||
Sbjct 7250869 TTCTAGAGTAATCGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCAT 7250916
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| ||||||| || || ||| |||||| |||||||| ||||| |
Sbjct 11637464 GCCTCCACGCAGACGCAACACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 11637405
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| |||| || ||||||||||| ||||| || || || || || |||| ||
Sbjct 11637404 TAAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGG 11637345
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || ||||| ||| || | || |||| ||| | | |||||| |||||
Sbjct 11637344 AATGCCTTCCTTATCC-TGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTCTCCA 11637286
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | ||||| || || || || || ||||| ||||| ||||||||
Sbjct 11637285 CCTCTAGGGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 11637237
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||| ||||| ||||| ||||| |
Sbjct 11637691 CCACCACGCAGACGGAGGACCAAGTGAAGGGTTGACTCTTTCTGGATGTTGTAGTCTGCT 11637632
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || |||||||||||||| ||||| || || ||||| ||||||| |||
Sbjct 11637631 AAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 11637572
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||| ||| || | || || | ||| | | ||||||| ||||||
Sbjct 11637571 ATGCCTTCCTTATCC-TGGATCTTGGCCTTGACGTTATCAATAGTGTCGGAGCTCTCCAC 11637513
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| ||| || || || || || || ||||| || || |||||||||
Sbjct 11637512 CTCCAGCGTGATGGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCATG 11637464
Score = 109 bits (120), Expect = 5e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||||| ||||| || ||||| |||||| || ||||| |||||||
Sbjct 11637235 CCACCACGCAGACGTAGCACCAAGTGAAGCGTCGACTCCTTTTGGATGTTGTAGTCGGCC 11637176
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| || |||| ||||||||||| ||||| || |||| | ||| ||||||| ||
Sbjct 11637175 AAGGTACGACCGTCTTCGAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGG 11637116
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | |||||||||| || | || |||| ||| | | | ||||| ||| ||
Sbjct 11637115 ATACCCTCCTTGTCC-TGGATCTTGGCTTTGACGTTGTCAATGGTGTCAGAGCT---TTC 11637060
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || || || || || || || ||||| ||||| ||||||||
Sbjct 11637059 AACCTCGAGGGTGATGGTCTTTCCGGTAAGTGTCTTCACGAAGATCTGCAT 11637009
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || ||||| |||||| || ||||| || || | |
Sbjct 7251146 CCACCACGGAGACGCAAGACCAAGTGAAGCGTAGACTCCTTTTGGATGTTGTAATCAGCG 7251205
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || ||| | || || || ||||| ||||| || |||| | ||| ||||| | |||
Sbjct 7251206 AGAGTACGCCCATCTTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGA 7251265
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || ||| | || | || | ||||| ||||||
Sbjct 7251266 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTCTCCAC 7251324
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || | || || || || || ||||| ||||||||||||||
Sbjct 7251325 CTCCAAAGTACTAGTCTTCCCGGTGAGTGTCTTAACGAAAATCTGCAT 7251372
>seq2
Length=44367670
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || ||||| || ||||||| || || || ||||||||||||||| ||||| |
Sbjct 25763772 GCCTCCACGTAGTCGCAACACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGC 25763831
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| | || ||||||||||| || ||||| || || ||||| ||||| | ||
Sbjct 25763832 CAAGGTGCGACCATCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 25763891
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| | ||| |||||| ||| |||| || | ||| | | | |||||| |||||
Sbjct 25763892 AATACCCTCTTTGTCC-TGAATTTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCCA 25763950
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || || || || |||| |||||| || || ||||||||
Sbjct 25763951 CTTCTAGAGTGATGGTCTTTCCTGTCAACGTCTTGACAAATATCTGCAT 25763999
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| || |||| || || || ||||||||| ||||| || || |
Sbjct 25764001 CCTCCACGTAGACGCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCA 25764060
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || ||||| |||||||| ||||| |||| | ||| ||||||| ||||
Sbjct 25764061 AGAGTACGTCCATCCTCGAGTTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGGGGA 25764120
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814
| | ||| ||||| ||| || |||| || | || | ||||| ||| ||
Sbjct 25764121 ATACCCTCTTTGTCTTGGATCTTG-GCTTTGACATTGTCAATGGTGTCGGAGCTCTCAAC 25764179
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || ||||||| || || || |||||||||||
Sbjct 25764180 CTCCAAAGTGATAGTCTTTCCCGTCAATGTTTTAACAAAAATCTGCAT 25764227
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||||||||| ||||| | || || | | || |||
Sbjct 25764247 ACAAGATGTAGAGTTGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCG 25764306
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|| ||||| ||||| || |||| | ||| ||||||| || | | |||||| ||| ||
Sbjct 25764307 AGTTGCTTACCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTATCC-TG 25764365
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829
| || || | ||| | | | ||||| ||| ||||||||||| || |||||
Sbjct 25764366 GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCT---CTCCACCTCCAAAGTGATCGT 25764422
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| ||||||| ||||| || || ||||||||
Sbjct 25764423 CTTTCCCGTCAAAGTCTTGACAAAGATCTGCAT 25764455
>seq8
Length=44809562
Score = 107 bits (118), Expect = 2e-18
Identities = 167/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| ||||| |||||| |||||| |||||||| || || |
Sbjct 30326429 CCACCACGGAGACGAAGCACAAGATGGAGCGTGGACTCCTTTTGAATGTTGTAATCCGCA 30326370
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
|| ||||| | || ||||||||||| || || || || || | || ||||| | |||
Sbjct 30326369 AGAGTGCGTCCATCTTCGAGCTGCTTTCCAGCAAAGATGAGTCTTTGCTGGTCTGGTGGG 30326310
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
| | || ||||||||| ||| | ||||| | || | | ||||| ||| ||
Sbjct 30326309 ATCCCT-TCCTTGTCC-TGAATCTTTGCCTTGACATTATCGATGGTGTCTGAGCT---CT 30326255
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| || || |||||||| || || ||||| || |||||||||||
Sbjct 30326254 CAACCTCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACAAAAATCTGCAT 30326203
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| | ||| || || || || ||||||||||| || || || |
Sbjct 30326657 CCACCACGTAGACGCAGCACAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAATCCGCA 30326598
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||| || || ||||| || || | ||| ||||||| |||
Sbjct 30326597 AGCGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGA 30326538
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| | ||||| | ||| | | | ||||| ||||||
Sbjct 30326537 ATCCCTTCCTTGTCC-TGAATCTTTGCCTTGACGTTGTCAATCGTGTCAGAGTTCTCCAC 30326479
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 30326478 CTCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTCACGAAAATCTGCAT 30326431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462289292954000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |