Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7 132 1e-25 seq9 100 6e-16 seq3 100 6e-16 seq1 100 6e-16 seq8 98.7 2e-15 seq5 98.7 2e-15 seq4 98.7 2e-15 seq2 98.7 2e-15 >seq7 Length=48366697 Score = 132 bits (146), Expect = 1e-25 Identities = 573/888 (65%), Gaps = 35/888 (4%) Strand=Plus/Minus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| |||||| |||||||| || | || ||||| |||||||||||||| | || Sbjct 33024517 TCTGCATGTTCCCGATCCAATACCCGCAGATCTGGGAGATGTACAAGAAGGCCGAAGCCT 33024458 Query 229811 CTTTCTGGACCACTGAGGAAGT--TCCTCTGAACGCAGAC-GTCGTCGACTGGCGTGAGA 229867 ||||||||||| | || ||||| ||||| | |||| ||| ||||||| |||| Sbjct 33024457 CTTTCTGGACCGCCGAAGAAGTCGACCTCT--CCCAAGACAATCG-CGACTGG---GAGA 33024404 Query 229868 AACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCG 229927 | ||||| |||| || || || |||||||||||| |||| | || ||||| | ||| | Sbjct 33024403 ATCTCAACGACGGAGAGCGACACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCAG 33024344 Query 229928 ATGGTATTGTGATGGAAAATCTGCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAG 229986 | || || || |||| ||||| | | || ||| || || || | ||| Sbjct 33024343 ACGGAATCGTTTTGGAGAATCT-CGCCTCGCGGTTCATGTCCGACGTGCAAGTCTCCGAG 33024285 Query 229987 GCACGGCAATTTTATGCTTACCAAA----CATTCAACGAATCTATCCATTCTGAACAATA 230042 || || || || | | ||| | ||| | ||| |||||| || || || Sbjct 33024284 GCGCGTGCCTTCTACGGGTTCCAGATCGCGATTGA--GAA--TATCCACTCAGAGATGTA 33024229 Query 230043 TGCTCTGCTTATCGACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGATGC 230102 || || ||||| || || ||| | | || || || | ||||| || Sbjct 33024228 CAGCCTCCTGCTCGACACGTACATCAAGGACAACAAGGAGAGGGACCACCTTTTCCGCGC 33024169 Query 230103 CATTGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACC 230162 ||||||| |||||| || || ||||| | ||||| || ||| | || Sbjct 33024168 GATTGAAACCATCCCTTGCGTCGCGAAGAAGGCCCAATGGGCCATGACGTGGATCGA--- 33024112 Query 230163 TGG---TAAATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTT 230219 ||| | | | || |||||| | ||||||||| | || || ||||| || | || Sbjct 33024111 TGGATCTCAGACTTTCGCCGAGAGGATCGTCGCCTTCGCTTGCGTCGAAGGGATCTTCTT 33024052 Query 230220 TTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGG 230279 ||||| || |||||| | ||||| ||||| ||| ||| | |||||||| | Sbjct 33024051 CTCCGGTAGCTTCTGCTCGATCTTCTGGCTTAAGAAGCGAGGGCTCATGCCTGGGTTAAC 33023992 Query 230280 TCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTAT 230339 | || |||||||| ||| || ||||| || | || | |||| | || || Sbjct 33023991 CTTCTCCAACGAGTTGATCTCCCGAGACGAAGGCTTGCACTGCGATTTCGCCTGCCTGAT 33023932 Query 230340 GTATTCAAAGCTCC--AGAAC-AAGCTACCATTCGAGACGGTCAAACAAATCATTACAGA 230396 ||| | |||| || || ||||| | ||| || || ||| | || Sbjct 33023931 CTAT---ACCCTCCTGAGGACGAAGCTCACGGAGGAGCGCGTGAAGTCGATCGTCTGCGA 33023875 Query 230397 AGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTT-ATTGGCA 230455 || || || | ||| | |||||| | || ||||| |||| || ||| || | || | Sbjct 33023874 CGCGGTCGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCTTG-CGCGTTGGTGGGGA 33023816 Query 230456 TGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCAC 230515 ||||| ||| || ||| | ||||| ||||| || || || || | | || | ||| | Sbjct 33023815 TGAACCGTGACCTGATGAGTCAGTATATCGAGTTTGTGGCGGATAGGCTGTTGGGTGCGC 33023756 Query 230516 TTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGC 230575 |||| |||| ||| |||||| ||| || |||| | |||||| | || |||| Sbjct 33023755 TTGGGTACGGGAAGGTGTACGGTGTGGCGAATCCGTTTGATTGGATGGAGTTGATCTCGC 33023696 Query 230576 TTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 |||| ||||| || ||||||||||| ||| | || |||| || |||| Sbjct 33023695 TTCAGGGGAAAACGAACTTCTTCGAGAAGAGAGTTGGTGATTACCAGA 33023648 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 34163994 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 34164053 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 34164054 CCCCACGGTGGGC 34164066 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 42510519 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 42510578 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 42510579 CCCACGGTGGGC 42510590 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 42488129 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 42488070 Query 165770 CCCACGATGGGC 165781 || ||| ||||| Sbjct 42488069 CCAACGGTGGGC 42488058 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || || |||| || |||||||||||||||| | Sbjct 22762286 GCCCGTCTAGCTCAGCTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAC 22762227 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22762226 CCCACGGTGGGC 22762215 >seq9 Length=54679868 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 2386093 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2386152 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 2386153 CCCCACGGTGGGC 2386165 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 49206403 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 49206344 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 49206343 CCCACGGTGGGC 49206332 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||| |||||||||| Sbjct 29194959 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGCGGGTTCGAGC 29195018 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 29195019 CCCACGGTGGGC 29195030 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||| |||||||||||||| Sbjct 54328693 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGATCGTGGGTTCGAGC 54328752 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 54328753 CCCACGGTGGGC 54328764 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 |||||||||||||| |||||||||| || || |||| || |||||||||||||||| ||| Sbjct 42695 CCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTCGTGGTCGTGGGTTCGAACCC 42754 Query 165772 CACGATGGGC 165781 || | ||||| Sbjct 42755 CATGGTGGGC 42764 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/65 (89%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 165258 CCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCACCGGTTCGAACCCG 165317 |||||||||||| | |||||| |||||||| |||||||||||||||||||||||||| Sbjct 11980000 CCATAGCTCAGTGG--TAGAGCATTCGACTGCAGATCGAGAGGTCACCGGTTCGAACCCG 11980057 Query 165318 GTTGG 165322 ||||| Sbjct 11980058 GTTGG 11980062 >seq3 Length=64984695 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 412501 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 412442 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 412441 CCCCACGGTGGGC 412429 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||| || |||||||||| || || |||| || |||||||||||||| || Sbjct 3265903 GCCCGTCTAGCTCCGTTGGTAGAGCGCAAGTCTCTTAACCTTGTGGTCGTGGGTTCAAGA 3265962 Query 165770 CCCACGATGGGC 165781 |||||||||||| Sbjct 3265963 CCCACGATGGGC 3265974 >seq1 Length=43764888 Score = 100 bits (110), Expect = 6e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || |||||||||||||||| |||||||||| || || |||| || ||||||||||||||| Sbjct 12461112 CTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 12461053 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 12461052 AGCCCCACGGTGGGC 12461038 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 9891264 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9891205 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9891204 CCCACGGTGGGC 9891193 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 16329657 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16329598 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 16329597 CCCACGGTGGGC 16329586 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 41618399 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 41618340 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 41618339 CCCACGGTGGGC 41618328 >seq8 Length=41758685 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 21416665 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 21416606 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 21416605 CCCACGGTGGGC 21416594 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 37240210 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 37240269 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 37240270 CCCACGGTGGGC 37240281 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 41229037 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 41228978 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 41228977 CCCACGGTGGGC 41228966 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 22848151 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22848210 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22848211 CCCACGGTGGGC 22848222 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 76742 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGG 76801 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 76802 GCCACGGTGGGC 76813 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 32683642 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAT 32683583 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 32683582 CCCACGGTGGGC 32683571 >seq5 Length=46902585 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 715756 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 715815 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 715816 CCCACGGTGGGC 715827 Score = 93.3 bits (102), Expect = 9e-14 Identities = 161/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTG-G 230453 || || || || | ||| | |||||| | || ||| | |||| ||| || || || | Sbjct 22585351 GACGCGGTCGAGATCGAGAGGGAGTTTGTGTGCGACTCGCTTCCGTGT-GCGTTGGTGTG 22585409 Query 230454 CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGC 230513 |||| | ||| || ||| | ||||| ||||| | ||| | || | |||| | || Sbjct 22585410 GATGACCCGTGAGCTGATGAGTCAGTATATCGAGTCCGTGGTGGATAGGCTTTTGGGTGT 22585469 Query 230514 ACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTC 230573 ||||| |||| ||| |||||| ||| || |||| | |||||| | ||||| Sbjct 22585470 GCTTGGGTACGGGAAGGTGTACGGTGTGGCGAATCCGTTTGATTGGATGGAGTTGATTTC 22585529 Query 230574 GCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 |||||| ||||| || ||||||||||| ||| | || |||||||| |||| Sbjct 22585530 GCTTCA-GGGAAAACGAACTTCTTCGAGAAGAGAGTTAGTGACTACCAGA 22585578 >seq4 Length=53719093 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 3835852 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3835911 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3835912 CCCACGGTGGGC 3835923 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||| ||| Sbjct 25839312 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAAGC 25839371 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 25839372 CCCACGGTGGGC 25839383 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 52912481 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGT 52912540 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 52912541 CCCACGGTGGGC 52912552 >seq2 Length=52886895 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 412961 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 412902 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 412901 CCCACGGTGGGC 412890 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 46821826 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAA 46821885 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 46821886 CCCCACGGTGGGC 46821898 Score = 95.1 bits (104), Expect = 3e-14 Identities = 560/882 (63%), Gaps = 20/882 (2%) Strand=Plus/Minus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| |||||||||||| || || | || ||||| ||||||||||| || | || Sbjct 45187557 TCTGCATGTTCCCAATCCACTACCCGCAGATCTGGGAGATGTACAAGAAAGCCGAAGCCT 45187498 Query 229811 CTTTCTGGACCACTGAGGAAGT--TCCTCT--GAACGCAGACGTCGTCGACTGGCGTGAG 229866 | ||||||||| | || ||||| ||||| || || ||| ||||||| | Sbjct 45187497 CCTTCTGGACCGCCGAAGAAGTCGACCTCTCCCAAGACACACG----CGACTGGGAGAAC 45187442 Query 229867 AAACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCC 229926 || ||| | |||| || || || |||||||||||| |||| | || ||||| | |||| Sbjct 45187441 AATCTCGACGACGGAGAGCGCCACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCC 45187382 Query 229927 GATGGTATTGTGATGGAAAATCTGCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGA 229985 || || || || | || ||||| ||| || | ||| || || ||| | || Sbjct 45187381 GACGGGATCGTTCTCGAGAATCTCGCCACCCGGTTCA-TGTCCGACGTGCAGGTCTCCGA 45187323 Query 229986 GGCACGGCAATTTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATATGC 230045 ||| || || || | | ||| | | ||| |||||| || || || Sbjct 45187322 GGCGCGCGCCTTCTACGGGTTCCAGATCGCGATCGAGAATATCCACTCGGAGATGTACAG 45187263 Query 230046 TCTGCTTATCGACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGATGCCAT 230105 ||| | | || || || ||| | | || || || | || || || || Sbjct 45187262 TCTCTTGTTAGATACGTACATCAAGGACAACAAGGAGAGGGACCATCTCTTCCGCGCGAT 45187203 Query 230106 TGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACCTGG 230165 ||| | |||||| || || ||||| | ||||| ||| ||| | || Sbjct 45187202 TGAGACCATCCCTTGCGTCGCGAAGAAGGCCCAATGGGCCATGAAGTGGATCGACGGATC 45187143 Query 230166 TAAATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGG 230225 | | | || |||||| | |||| || | | || || ||||| || | || ||||| Sbjct 45187142 TCAGACTTTCGCCGAGAGGATCGTGGCGTTCGCTTGCGTCGAAGGGATCTTCTTCTCCGG 45187083 Query 230226 GAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTC 230285 || |||||| | ||||| ||||| ||| || | ||||| || ||| | || Sbjct 45187082 TAGCTTCTGCTCGATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCGGGGCTCACCTTCTC 45187023 Query 230286 TAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAG-CTTATGTATT 230344 |||||| | ||| || ||||| || || || | ||| ||| | || || ||| Sbjct 45187022 CAACGAGCTGATCTCGCGAGACGAAGGCCTTCACTGCGACTTC-GCGTGCCTGATCTATA 45186964 Query 230345 CAAAGCTCCAGAAC-AAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTT 230403 | || || || |||||| | ||| || || ||| | || || || Sbjct 45186963 C-CCTCTTGAGGACGAAGCTATCGGAAGAGCGCGTGAAGTCGATCGTGTGCGACGCGGTG 45186905 Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTT-ATTGGCATGAACGC 230462 || | ||| | |||||| | || ||||| |||| || ||| || | || |||||| | Sbjct 45186904 GAGATCGAGAGGGAGTTTGTCTGCGACGCGCTTCCTTG-CGCGTTGGTGGGGATGAAC-C 45186847 Query 230463 TGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTT 230521 | |||| ||| | ||||| || || ||||| || || | | || | ||| ||||| | Sbjct 45186846 GGGACTTGATGAGTCAGTATATTGAGTTCGTGGCGGATAGGTTGTTGGGTGCGCTTGGGT 45186787 Query 230522 ACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAG 230581 ||| ||| |||||| ||| || |||| | |||||| | || |||||||| | Sbjct 45186786 ACGGGAAGGTGTACGGTGTGGCGAATCCGTTTGATTGGATGGAGTTGATCTCGCTTCAGG 45186727 Query 230582 GGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 |||| || || |||||||| ||| | || |||| || |||| Sbjct 45186726 GGAAAACGAATTTCTTCGAGAAGAGGGTTGGTGATTACCAGA 45186685 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 47664765 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAT 47664824 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 47664825 CCCACGGTGGGC 47664836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057378283874180