Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3 122 7e-23 seq1 120 3e-22 seq4 114 1e-20 seq6 113 4e-20 seq9 107 2e-18 seq7 102 7e-17 seq5 87.8 2e-12 seq8 86.0 5e-12 >seq3 Length=64984695 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| |||| || | || |||||||| || ||||| ||||| ||| Sbjct 11141789 CCACCACGAAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCC 11141848 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| |||| |||| ||| || || ||| | ||||| |||||||| ||| || Sbjct 11141849 AAGGTTCTCCCGTCTTCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 11141908 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||||| ||| || | | ||| || ||| | ||| Sbjct 11141909 ATGCCTTCCTTGTCCTGGATCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACC 11141968 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||| | ||||| || || || ||||| Sbjct 11141969 TCGAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| || | ||| |||||||| || ||||| ||||||||| Sbjct 34860927 CCACCACGAAGCCTGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGCC 34860986 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| ||||||||||| || | || || | ||||||||| || Sbjct 34860987 AAAGTACGACCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 34861046 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | | ||| || ||| Sbjct 34861047 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATAGTGTCCGAACTCTCAACC 34861106 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||||||||| | || ||||||||||| ||||| Sbjct 34861107 TCCAATGTGATGGTCTTGCCGGTAAGGGTCTTGACAAATATCTGCAT 34861153 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || |||||||| || ||||| ||||| || Sbjct 16418967 CCACCACGCAGACGCAGCACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCT 16419026 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | |||| || ||||| || || ||| | || | ||||||||||||| || Sbjct 16419027 AAGGTACGACCGTCTTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGA 16419086 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||| || | | ||| || || | ||| Sbjct 16419087 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCAACC 16419146 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| ||||| || || |||||||| || ||||| Sbjct 16419147 TCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 16419193 Score = 107 bits (118), Expect = 2e-18 Identities = 168/239 (70%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 15816646 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 15816587 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| || || || | || |||| |||||||||| || Sbjct 15816586 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 15816527 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || || | Sbjct 15816526 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACT 15816467 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT-TTTGAATCTCT 21186 || | ||| || ||||| || |||| ||||| || || || ||||| |||| ||||| Sbjct 15816466 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTGCTTCTCT 15816408 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||| || |||| || | || ||||||||||||||||| ||||| || Sbjct 16418739 CCACCACGGAGCCTTAGGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCT 16418798 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| ||||| || | || || | |||||||||| || Sbjct 16418799 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 16418858 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| |||||| ||||| | | | ||| || | |||| Sbjct 16418859 ATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTATCAATAGTGTCGGAGCTCTCCACC 16418918 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||||||||| | || || || || || ||||| Sbjct 16418919 TCCAGTGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 16418965 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||||||||| ||||| ||||| |||| || | |||| || ||||| || || Sbjct 34861869 GTAGACTCCTTTTGGATGTTGTAGTCGGCCAAAGTCCTGCCGTCTTCAAGCTGCTTTCCG 34861928 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || |||||||| ||| || | |||||||||||| |||||| ||| Sbjct 34861929 GCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTA 34861988 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | || || | ||| |||||||| ||||| | ||| Sbjct 34861989 ACGTTGTCGATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTT 34862048 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 34862049 TTCACAAAGATCTGCAT 34862065 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||||||||||| || ||||| ||||| ||| Sbjct 11141105 CCTCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCC 11141164 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | ||||||||| || Sbjct 11141165 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGA 11141224 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | | | | || || | |||| Sbjct 11141225 ATACCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACC 11141284 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| || || || || || || ||||| Sbjct 11141285 TCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCAT 11141331 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| || | ||| || || || || ||||||||||| ||| Sbjct 11141333 CCACCACGGAGCCTGAGCACCAAGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCC 11141392 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| ||||||||||| || | || || | |||||||||| || Sbjct 11141393 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 11141452 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || || ||||| ||| || |||||| | | | | || || |||| Sbjct 11141453 ATACCCTCTTTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 11141512 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || ||||| || || || || |||||||| Sbjct 11141513 TCTAGAGTGATCGTCTTTCCTGTTAAAGTCTTCACGAAGATTTGCAT 11141559 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || || || || ||||| ||||| || || || | ||||||| ||| ||||| Sbjct 34861185 GTAGATTCTTTCTGGATGTTGTAGTCAGCTAGAGTCCTTCCATCCTCCAACTGCTTGCCG 34861244 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | |||||||||||| || | || |||||||| |||||| |||| Sbjct 34861245 GCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCTTTC 34861304 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||| || | |||| |||| ||||| ||||| || || || || Sbjct 34861305 ACGTTGTCAATAGTGTCTGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCCGTCAAGGTC 34861364 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| |||||||| Sbjct 34861365 TTGACAAAAATTTGCAT 34861381 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | || |||||||| || ||||| ||||| ||| Sbjct 16419195 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16419254 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | |||| || ||||| || || || |||| || |||||||| || || Sbjct 16419255 AAAGTTCTGCCGTCTTCAAGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGATCGGGAGGG 16419314 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| ||| || | | | | || ||| | ||| Sbjct 16419315 ATACCTTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCAATGGTGTCAGAGCTTTCCACC 16419374 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || || | || || || || || ||||| Sbjct 16419375 TCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 16419421 >seq1 Length=43764888 Score = 120 bits (132), Expect = 3e-22 Identities = 173/244 (71%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | ||| |||||||| || ||||| |||||||| Sbjct 35466781 CCACCACGGAGCCTGAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCA 35466722 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||||| ||| ||||| ||| | || || |||||||||||| || Sbjct 35466721 AGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 35466662 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || |||||| || || | | ||| |||||| | ||| Sbjct 35466661 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTATCAGAGCTTTCCACC 35466602 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCTCTTA 21188 || | ||| |||||||| ||||| | ||||| ||||| || ||||| | ||| | || Sbjct 35466601 TCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCATCTGAAATTTTTTT 35466542 Query 21189 TAAA 21192 |||| Sbjct 35466541 TAAA 35466538 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| || | || |||||||| || ||||| ||||| || Sbjct 35467465 CCACCACGAAGCCTGAGCACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCA 35467406 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| || || || | || || | |||||||||| || Sbjct 35467405 AGAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 35467346 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | | || || | ||| Sbjct 35467345 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 35467286 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||||||||| | || || |||||||||||||| Sbjct 35467285 TCCAATGTGATAGTCTTGCCGGTAAGGGTCTTCACAAATATTTGCAT 35467239 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| |||||||| || || || | ||| | | ||||| ||||| || || Sbjct 35467663 GTGGACTCCTTCTGAATGTTGTAATCTGCTAAGGTGCGACCATCCTCGAGCTGCTTTCCA 35467604 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| || | |||||||||||| |||||| || Sbjct 35467603 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 35467544 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || || | |||| |||| || |||||||||||||| || || Sbjct 35467543 ACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTGCCGGTCAAGGTC 35467484 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 35467483 TTCACAAAAATCTGCAT 35467467 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| |||| || | || |||||||| |||||||| || || ||| Sbjct 35467237 CCACCACGGAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCC 35467178 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | || |||| || || || ||| | ||||| ||||||||||| || Sbjct 35467177 AAGGTCCTGCCATCTTCCAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGA 35467118 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||| || |||||| | | | | || || |||| Sbjct 35467117 ATACCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACC 35467058 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || || || || ||||| || |||||||| Sbjct 35467057 TCTAGCGTGATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 35467011 >seq4 Length=53719093 Score = 114 bits (126), Expect = 1e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | || ||||||||||||||||| ||||||||| Sbjct 28156519 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGCC 28156460 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | |||| || ||||| ||||| || | || | |||||||||||| || Sbjct 28156459 AATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 28156400 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCT-CCGT 21127 | || |||||||| ||||||| ||| || | | | | |||||| | || || Sbjct 28156399 ATACCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCAATAGTATCGGAGCTCTCCCAC 28156340 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| || || || || ||||| |||||||| || ||||| Sbjct 28156339 CTCCAATGTAATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||||| | ||| | || ||||||||||| ||||| || |||| Sbjct 7247415 TTCCACCACGAAGACGAAGCACAAGATGGAGCGTAGACTCCTTTTGGATGTTGTAATCCG 7247474 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || || | | ||||| |||||||| || || | || |||||||||||||| | Sbjct 7247475 CAAGAGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTG 7247534 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| |||||| || || | | | | || || | || Sbjct 7247535 GGATCCCTTCCTTGTCCTGGATCTTCGCCTTGACATTGTCTATTGTGTCTGAGCTTTCAA 7247594 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||| |||||||| | || |||||||| || ||||| Sbjct 7247595 CCTCCAAAGTAATGGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 7247643 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||| || ||||| || ||||| || || || | | ||||| ||||| || || Sbjct 7247675 GTAGACTCTTTCTGAATATTGTAGTCAGCGAGCGTGCGCCCATCCTCAAGCTGCTTACCG 7247734 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || |||||||||||| || | |||||||||||| |||||| || Sbjct 7247735 GCGAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTG 7247794 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||| || | ||| || | ||||||||||||||||||| ||| Sbjct 7247795 ACGTTGTCAATAGTGTCGGAGCTCTCGACCTCGAGAGTAATGGTCTTGCCGGTTAGAGTT 7247854 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 7247855 TTCACGAAAATTTGCAT 7247871 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| | ||||||| ||||| || || Sbjct 24867186 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCGTCCTCGAGCTGCTTCCCG 24867245 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| || | |||||||||||| |||||| || Sbjct 24867246 GCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 24867305 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || || || | ||| || ||||| || |||| ||| Sbjct 24867306 ACGTTGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTT 24867365 Query 21159 TTGACAAATATTTGCATTTT 21178 || || || || ||||| || Sbjct 24867366 TTCACGAAGATCTGCATCTT 24867385 >seq6 Length=39822476 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| ||||| || Sbjct 23704413 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 23704354 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || |||| ||||||||||| || || | || |||| |||||||||| || Sbjct 23704353 AGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 23704294 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || ||| Sbjct 23704293 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 23704234 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| |||||||| || |||| ||||| || || || ||||| || Sbjct 23704233 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTAACGAAGATCTGCATCTT 23704184 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| ||||||||||| ||||| ||||| || Sbjct 26070698 CCACCACGGAGCCTGAGGACGAGATGCAAAGTCGACTCCTTTTGGATGTTGTAGTCAGCT 26070639 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||| ||||| |||||||| | || || |||||||| ||| || Sbjct 26070638 AGAGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGCCTCTGCTGATCCGGAGGG 26070579 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | || |||||||| |||||| Sbjct 26070578 ATCCCCTCCTTGTCCTGGATCTT 26070556 >seq9 Length=54679868 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || |||||| |||| ||| | ||| |||||||| || ||||| ||||| || Sbjct 53991273 CCACCTCTCAACCTGAGAACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCG 53991214 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | || || ||||| || || || | || || |||||||||||| || Sbjct 53991213 AGAGTCCTTCCATCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 53991154 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | | || ||| | ||| Sbjct 53991153 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACC 53991094 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||||| | ||||| || || |||||||| Sbjct 53991093 TCGAGAGTAATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 53991047 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | || | ||| ||||| || || || || ||||| || || || | | ||| Sbjct 53991486 AGCACAAGGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCAGCGAGTGTGCGTCCATCC 53991427 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | ||||| |||||||||||| || | ||||||||||| Sbjct 53991426 TCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCC 53991367 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| || || | | | | || || | ||| || | ||| |||||| Sbjct 53991366 TGGATCTTTGCCTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTC 53991307 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || || |||||||| || ||||| Sbjct 53991306 TTGCCTGTCAAAGTCTTGACAAAGATCTGCAT 53991275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||||| | || | ||| |||||||| || ||||| || || | Sbjct 53991959 TTCCACCACGAAGACGCAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAG 53991900 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | ||||| |||||||| || || | || |||||||| |||||| | Sbjct 53991899 CCAAAGTCCTACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAG 53991840 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||||| || || | | | | || || | ||| Sbjct 53991839 GGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCTATCGTGTCTGAGCTCTCAA 53991780 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| ||| || |||||||| || || || || ||||||||||||||| Sbjct 53991779 CTTCCAAGGTTATAGTCTTGCCTGTCAAAGTCTTCACAAATATTTGCATT 53991730 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || || || || ||||| || || | | ||||| |||||||| || Sbjct 53991699 GTAGACTCCTTCTGGATATTGTAATCCGCAAGCGTACGACCATCCTCGAGCTGTTTCCCA 53991640 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || |||||||||||||| || | ||||||||||| ||||| ||| Sbjct 53991639 GCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTCGCCTTC 53991580 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || ||| | |||| |||| || || || |||||||| | || Sbjct 53991579 ACATTGTCAATCGTGTCAGAGCTCTCCACCTCCAAAGTTATTGTTTTGCCGGTGAGGGTC 53991520 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 53991519 TTGACAAAAATCTGCAT 53991503 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| ||||||||||| ||||| ||||| || Sbjct 23026053 CCACCACGAAGCCTGAGGACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCG 23026112 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 || || | | || || ||||| || || ||| | || | |||||||||||| Sbjct 23026113 AGAGTACGCCCATCTTCAAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCC 23026166 >seq7 Length=48366697 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||||| |||||||| || | || |||||||| || ||||| |||||||| Sbjct 20455719 TCCTCCTCTCAGCCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 20455778 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || |||| |||||||| || || ||| | || || | |||||||||| || Sbjct 20455779 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGG 20455838 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| ||||| ||||| | | ||| || || | || Sbjct 20455839 GATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCAAC 20455898 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | || || ||||| || |||| ||||| ||||| || |||||||| Sbjct 20455899 CTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 20455949 >seq5 Length=46902585 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||| | ||| |||| || | || |||||||| || ||||| || || || Sbjct 12956450 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 12956391 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || |||| |||||||| || || || | || |||| |||||| ||| || Sbjct 12956390 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGG 12956331 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| |||||| ||||| | | ||| || || | || Sbjct 12956330 GATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 12956271 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| ||||| || |||||||| Sbjct 12956270 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 12956220 >seq8 Length=41758685 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| || || | ||| || | ||| | || |||||||| || ||||| ||||| || Sbjct 33346263 CCCCCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 33346204 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | |||| || ||||| || || || |||| |||| ||||||||| || Sbjct 33346203 AGCGTGCGTCCGTCTTCGAGCTGCTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGG 33346144 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | ||| || || || ||| Sbjct 33346143 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 33346084 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || || || || |||| ||||| || || || ||||| || Sbjct 33346083 TCGAGGGTGATTGTTTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 33346034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422089959304376