Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq3 114 8e-21 seq8 113 3e-20 seq4 109 4e-19 seq1 109 4e-19 seq7 104 2e-17 seq6 104 2e-17 seq5 104 2e-17 seq9 100 2e-16 >seq3 Length=64984695 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| ||||||||||||| Sbjct 15816646 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 15816587 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| |||||| || ||||| || || ||||||||||| || Sbjct 15816586 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 15816527 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | || | | || | |||| |||||||| Sbjct 15816526 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACT 15816467 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || |||||||| |||||||||||| Sbjct 15816466 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 15816419 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | ||| || ||||| ||||||||||| | | Sbjct 11141789 CCACCACGAAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCC 11141848 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | |||| ||||||||||| || || || || |||| |||||| || || Sbjct 11141849 AAGGTTCTCCCGTCTTCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 11141908 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| |||||| |||||| | | | || | || | ||| || Sbjct 11141909 ATGCCTTCCTTGTCCTGGATCTTT-GCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCAC 11141967 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || ||||||||||||||||| |||||||||||| Sbjct 11141968 CTCGAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAGATCTGCATC 11142016 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | ||| || ||||| ||||||||||||| | Sbjct 16419195 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16419254 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | |||| || | |||||| || ||||||||||||| |||||| ||| || Sbjct 16419255 AAAGTTCTGCCGTCTTCAAGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGATCGGGAGGG 16419314 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||| || ||||| | | | | || | || | ||| || Sbjct 16419315 ATACCTTCCTTGTCCTGAATC-TTGGCTTTAACGTTGTCAATGGTGTCAGAGCTTTCCAC 16419373 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || || |||||||| || || |||||||||||| Sbjct 16419374 CTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCATC 16419422 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || |||| ||| | ||| || || || ||||||||||||| | Sbjct 34861839 CCTCCACGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGCC 34861898 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | |||| || | |||||| || ||||| ||||||| |||||| || || Sbjct 34861899 AAAGTCCTGCCGTCTTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGA 34861958 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| |||||| | | | || | || | ||| || Sbjct 34861959 ATGCCTTCCTTGTCCTGGATCTTG-GCTTTAACGTTGTCGATGGTGTCAGAGCTTTCAAC 34862017 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || |||||||| ||||||||||||||||||||| Sbjct 34862018 CTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCATC 34862066 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||||| ||| | |||| || ||||| ||||||||||| | Sbjct 59730412 CCTCCACGTAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 59730353 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || ||||||||||| || ||||| || | || |||||| ||| ||| Sbjct 59730352 AGAGTACGTCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCGGGGGGG 59730293 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||| || ||| || ||||| | | | | || | || | || || Sbjct 59730292 ATGCCTTCCTTATCCTGGATC-TTGGCTTTGACGTTGTCGATGGTGTCCGAGCTCTCCAC 59730234 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || ||||||||||| || || |||||||||||| Sbjct 59730233 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 59730185 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || ||||| || |||| ||| | || || || || ||||||||||| Sbjct 16418735 GAAACCACCACGGAGCCTTAGGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTC 16418794 Query 34219 GGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGA 34277 | | | || || | || || | ||||||||| ||||| ||||| ||||||||||| Sbjct 16418795 TGCTAAGGTG-CGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCG 16418853 Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATT 34337 || | || || ||||| ||||| ||| | | | || | |||| | Sbjct 16418854 GAGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTATCAATAGTGTCGGAGCTCT 16418913 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct 16418914 CCACCTCCAGTGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 16418965 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | ||| ||||||||| ||||| ||||| | | Sbjct 11141333 CCACCACGGAGCCTGAGCACCAAGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCC 11141392 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||| ||||| ||||| ||||| ||||||||||| || Sbjct 11141393 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 11141452 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||| ||||| || ||| ||||| | | | | || | |||| || || Sbjct 11141453 ATACCCTCTTTGTCCTGGAT-TTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCAC 11141511 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || || | ||| ||||| ||||| ||||| Sbjct 11141512 CTCTAGAGTGATCGTCTTTCCTGTTAAAGTCTTCACGAAGATTTGCAT 11141559 >seq8 Length=41758685 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| ||| || |||| || | |||||| || |||||| Sbjct 33346227 TCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCGAGCTGCTTCCCGGCGAAA 33346168 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | | |||||||| ||||| ||| | || | Sbjct 33346167 ATCAGTCGCTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 33346108 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || ||||| || | ||||| ||||| || || || |||||||| Sbjct 33346107 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTCCCCGTTAGGGTTTTCACG 33346048 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 33346047 AAGATCTGCATC 33346036 Score = 95.1 bits (104), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| ||||||||||| | ||| |||| | || || | ||| || || ||||| | Sbjct 28102507 CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGA 28102448 Query 34260 TGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 | | |||||||| || || || || ||| ||||| ||||| ||| | || Sbjct 28102447 TCAATCGCTGCTGATCCGGAGGGATACCTTCT--TTGTCTTGGATCTTGGCCTTGACATT 28102390 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| || ||||| || | |||||||| || ||||| || |||||||| Sbjct 28102389 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCAC 28102330 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 28102329 GAAGATCTGCATC 28102317 >seq4 Length=53719093 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||||| Sbjct 24867156 CCACCGCGGAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 24867215 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || | | |||| || | |||||| || ||||| || ||||||||||||| || |||| Sbjct 24867216 AGGGTCCTGCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGG 24867275 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||| | | | | || | |||| |||||||| Sbjct 24867276 -ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGAC 24867334 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || |||||||| |||||||||||| Sbjct 24867335 CTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 24867383 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | ||||| ||||| | ||| |||||||| || |||||||| | Sbjct 7247645 CCACCGCGGAGACGAAGCACGAGGTGGAGCGTAGACTCTTTCTGAATATTGTAGTCAGCG 7247704 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || || | |||||| || ||||| ||||||| ||||||||| || Sbjct 7247705 AGCGTGCGCCCATCCTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 7247764 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| ||||| Sbjct 7247765 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCGACC 7247824 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | || ||||| |||||||| ||||||||||| || || |||||| Sbjct 7247825 TCGAGAGTAATGGTCTTGCCGGTTAGAGTTTTCACGAAAATTTGCATC 7247872 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||||| || || | ||| || || || |||||||| || | Sbjct 7247416 TCCACCACGAAGACGAAGCACAAGATGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGC 7247475 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 || || | || || | ||| || || ||||| ||||| | ||||||||| | || Sbjct 7247476 AAGAGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGG 7247535 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||||| ||||| ||| | || | |||| | || | ||| | Sbjct 7247536 GATCCCT-TCCTTGTCCTGGATCTTCGCCTTGACATTGTCTATTGTGTCTGAGCTTTCAA 7247594 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || ||||||||||||||||| || || ||||| |||||||| Sbjct 7247595 CCTCCAAAGTAATGGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 7247643 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || ||||| ||| | ||| || || || ||||||||||| | | Sbjct 28156519 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGCC 28156460 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | |||| || | ||||||||| ||||| || | || ||||||||| || Sbjct 28156459 AATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 28156400 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGG-TCGATTCGA 34340 | | ||||||||| ||| |||||||| | | | | || | ||||| | | | | Sbjct 28156399 ATACCCTCCTTGTCTTGGATC-TTTGCTTTGACGTTGTCAATAGTATCGGAGCTCTCCCA 28156341 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || || ||||| || || | || || |||||||||||||| Sbjct 28156340 CCTCCAATGTAATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 >seq1 Length=43764888 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | ||| || ||||| ||||||||||| | Sbjct 35466781 CCACCACGGAGCCTGAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCA 35466722 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | || |||||||||||||| || || ||||||| ||||||||| || Sbjct 35466721 AGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 35466662 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | | | | || | ||| | ||| || Sbjct 35466661 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTATCAGAGCTTTCCACC 35466602 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || |||||||||||||||||||||||||||||| Sbjct 35466601 TCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCATC 35466554 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | || || ||||| ||||||||||| | Sbjct 35467465 CCACCACGAAGCCTGAGCACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCA 35467406 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | |||||| || ||||| ||||| ||||||||||| || Sbjct 35467405 AGAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 35467346 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | || | || || Sbjct 35467345 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 35467286 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || |||||||| || || |||||||| || ||||| Sbjct 35467285 TCCAATGTGATAGTCTTGCCGGTAAGGGTCTTCACAAATATTTGCAT 35467239 >seq7 Length=48366697 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||||| ||||||| ||| | || || ||||| ||||||||||| | Sbjct 20455719 TCCTCCTCTCAGCCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 20455778 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGG 34280 ||| | |||| |||| |||||| || || || || || |||||||||| || || Sbjct 20455779 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGG 20455838 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||||| ||||| ||| | || | | |||| |||| ||||| | Sbjct 20455839 GATCCCT-TCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCAA 20455897 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | || || || || || || || |||||||||||||||||||| Sbjct 20455898 CCTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 20455946 >seq6 Length=39822476 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || |||| |||| |||| ||| || || ||||| Sbjct 23704377 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAG 23704318 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| || | || |||||||| ||||| ||| | | | Sbjct 23704317 ATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 23704258 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || ||||| || | |||||||| || || || || ||||| || Sbjct 23704257 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTAACG 23704198 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 23704197 AAGATCTGCATC 23704186 >seq5 Length=46902585 Score = 104 bits (114), Expect = 2e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| | || |||||||| | || || ||||| |||||||| |||| Sbjct 12956450 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 12956391 Query 34222 CAGCTGACGGTC-GTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACG 34279 || || | || ||| |||| |||||| || ||||| || || |||||||| || | | Sbjct 12956390 GAG-TGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTG 12956332 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || |||||||| ||||| ||| | || | | |||| |||| |||||| Sbjct 12956331 GGATCCCT-TCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCG 12956273 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | || || || || || || || |||||||||||||||||||| Sbjct 12956272 ACCTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 12956223 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | || ||||| ||| | ||| || ||||| |||||||||||| Sbjct 33725326 AAGCCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCG 33725267 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || || | || || | |||||| || ||||| ||||| ||||||||||| Sbjct 33725266 GCTAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGA 33725207 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || |||||||| ||||| ||| | | | |||| |||| ||| Sbjct 33725206 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCG 33725147 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||||| || || || | || || |||||||| ||||| Sbjct 33725146 ACCTCCAGTGTGATGGTCTTACCAGTCAACGTCTTGACAAAGATTTGCAT 33725097 >seq9 Length=54679868 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | || ||||| || | ||| |||||||| ||||||||||| Sbjct 23042203 AAGCCACCACGGAGACGCAACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCA 23042262 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || ||| | || || | ||||||||| ||||| ||||| ||||||||||| Sbjct 23042263 GCCAAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGT 23042322 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | ||||||||| ||||| ||| | | | | || | |||| || Sbjct 23042323 GGGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCA 23042382 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | ||||| || || ||||| ||||| ||||||||||||||||| Sbjct 23042383 ACTTCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 23042432 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||||| ||| | || |||||||| ||||||||||| | | Sbjct 23042434 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCC 23042493 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||||||||| ||||| || | |||||||||||| || Sbjct 23042494 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGA 23042553 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||| || ||||| | | | | || | |||| || || Sbjct 23042554 ATACCCTCCTTGTCTTGGATC-TTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCAC 23042612 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || ||||||||||| || || ||||||||||| Sbjct 23042613 CTCGAGTGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 23042660 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | || ||| || ||||| || | ||| || ||||| ||||||||||| | Sbjct 53991273 CCACCTCTCAACCTGAGAACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCG 53991214 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | || || | |||||| || ||||| ||||||| ||||||||| || Sbjct 53991213 AGAGTCCTTCCATCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 53991154 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | || | ||||| Sbjct 53991153 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACC 53991094 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | || ||||| |||||||||||||||||||| || || |||||| Sbjct 53991093 TCGAGAGTAATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCATC 53991046 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || ||| ||||| | ||| || ||||| || ||||| || | Sbjct 53991730 TCCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCCGC 53991671 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 ||| ||| | || || | ||| || || ||||| ||||| | ||||||||| | || Sbjct 53991670 AAGCGTACGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGG 53991611 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||||| ||||| ||| | || | | |||| || | || | Sbjct 53991610 GATCCCT-TCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCAGAGCTCTCCA 53991552 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || || |||||||||||||| || || ||||| |||||||| Sbjct 53991551 CCTCCAAAGTTATTGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 53991503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322942513348160