Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 seq3 114 1e-20 seq9 111 1e-19 seq6 102 6e-17 seq4 100 2e-16 seq8 96.9 3e-15 seq5 96.9 3e-15 >seq1 Length=43764888 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| ||||| |||||||||||||||||| ||| || | | || ||| Sbjct 35467219 ACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTGCCATCTTCC 35467160 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| ||||| || || || | || ||| ||||||||||| | ||||||||||||| Sbjct 35467159 AATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGG 35467100 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | |||| || ||||||||| | || |||||||| Sbjct 35467099 ATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTCTTT 35467040 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || |||| |||||| || |||||||||||| Sbjct 35467039 CCTGTCAAAGTCTTGACGAAGATTTGCATG 35467010 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTC 45186 |||||||| || ||| |||||||||||||||||| || | | || | |||| | || || Sbjct 35467675 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCTAAGGT-GCGACCATCCTC 35467617 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || ||||| ||||| || | ||||| ||||| ||||| | || |||||||| Sbjct 35467616 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTG 35467557 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | |||| | ||||||||||| || || ||||| Sbjct 35467556 GATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTT 35467497 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| |||| ||||||||||| || ||||| Sbjct 35467496 GCCGGTCAAGGTCTTCACAAAAATCTGCAT 35467467 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| ||||||||||| || |||| | || || Sbjct 35467447 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGACCATCCTCA 35467388 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | ||||| ||||| ||||| | || ||||||||| Sbjct 35467387 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 35467328 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||||| || || |||||| Sbjct 35467327 ATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAATGTGATAGTCTTG 35467268 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||||||||| ||||||||| Sbjct 35467267 CCGGTAAGGGTCTTCACAAATATTTGCATG 35467238 >seq3 Length=64984695 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || || ||||| || || ||||||||| |||||||||||| || |||| | || Sbjct 59730625 AACACTAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCC 59730566 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || |||||||| || || | ||||| ||||| ||||| | || |||||||| Sbjct 59730565 TCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCT 59730506 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | |||| || ||| ||||| | ||||||||| Sbjct 59730505 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAACTCTCGACCTCTAGAGTAATCGTC 59730446 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || |||||||| ||||| |||||||| |||||| Sbjct 59730445 TTTCCCGTCAGTGTCTTGACAAAGATCTGCATG 59730413 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || |||||||||||||||||||||| || |||| | || Sbjct 59730853 AACACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACCATCC 59730794 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||| ||||| || | ||||| ||||| ||||| | || |||||||| Sbjct 59730793 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCT 59730734 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | ||||| || ||||||||||| || || ||| Sbjct 59730733 TGGATCTTGGCCTTGACGTTATCAATGGTGTCCGAACTCTCCACCTCCAGTGTGATGGTC 59730674 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || | ||||| |||||||| ||||| Sbjct 59730673 TTTCCGGTTAAGGTCTTGACAAAGATCTGCAT 59730642 Score = 111 bits (122), Expect = 1e-19 Identities = 151/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGTCCAGTT 45191 || ||||| ||||||||| |||||||||||| || ||| | |||| || || | Sbjct 16419219 TGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTT--CTGCCGTCTTCAAGCT 16419276 Query 45192 GTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTT 45251 | ||||||||||| || | || ||| || |||||||| | ||| ||||||||| || | Sbjct 16419277 GCTTTCCGGCGAAAATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTGAA-TC 16419335 Query 45252 TTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCC 45310 || |||| | || | | | | |||| | |||||||| | ||| || ||||| ||| Sbjct 16419336 TTGGCTTTAACGTTGTCAATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCC 16419395 Query 45311 GTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| || ||||| ||||| Sbjct 16419396 GTGAGAGTCTTAACGAAGATCTGCAT 16419421 Score = 105 bits (116), Expect = 5e-18 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTC 45186 |||||||| ||||| ||||||||| ||||||||||| | | || | ||| |||| || Sbjct 16418985 ACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCTAAGGT-ACGACCGTCTTC 16419043 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || |||||||| || ||||| | ||| ||||| ||||| | || |||||||| Sbjct 16419044 AAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTG 16419103 Query 45247 AATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 | | || |||| || | | | | |||| | ||| ||||||| || || |||| Sbjct 16419104 GA-TCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCT 16419162 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || |||| ||||| |||||||| ||||| Sbjct 16419163 TTCCGGTCAAGGTCTTGACAAAGATCTGCAT 16419193 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || || ||||| ||||| ||||| || ||| | || || Sbjct 11141351 ACCAAGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGACCATCCTCA 11141410 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | ||||| ||||| ||||| | |||||| |||||| Sbjct 11141411 AGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGG 11141470 Query 45248 ATTTTTTGCTTAACCGCCGCCAC-GCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||||| |||| || | || | |||| || ||||||||| | || |||||||| Sbjct 11141471 ATTTTG-GCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTGATCGTCTT 11141529 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || | ||||||||| |||||||||||| Sbjct 11141530 TCCTGTTAAAGTCTTCACGAAGATTTGCATG 11141560 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| ||||||||||| || |||| | || || Sbjct 11141123 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAAGGTGCGACCATCCTCG 11141182 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| || | ||||| ||||| ||||| | ||| |||||||| Sbjct 11141183 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGG 11141242 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | || || |||||| Sbjct 11141243 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCAAGTGTGATGGTCTTG 11141302 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| || || || ||||| Sbjct 11141303 CCGGTCAAGGTCTTAACGAAAATCTGCAT 11141331 Score = 102 bits (112), Expect = 6e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| ||||||||||| || || | || Sbjct 59730397 AACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCATCC 59730338 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| || ||||||||||| ||||||| ||| || ||||| || | || ||||| ||| Sbjct 59730337 TCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCGGGGGGGATGCCTTCCTTATCC 59730278 Query 45245 GCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | | || |||| || | | | | ||||| | ||||||||| | ||| || || Sbjct 59730277 TGGA-TCTTGGCTTTGACGTTGTCGATGGTGTCCGAGCTCTCCACCTCGAGGGTGATGGT 59730219 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || || |||||||| || ||||| ||||| Sbjct 59730218 CTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 59730186 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||| ||| || || ||| |||||||||||||||||| || | | || Sbjct 11141576 AAGACCAGGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCGGCCAAGGTCCTGCCATCC 11141635 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| || || ||||| || ||||||| ||| ||||| || || | |||||||| ||| Sbjct 11141636 TCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCC 11141695 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || |||||| | | | |||| | ||||||||||| || |||||| Sbjct 11141696 TGGATCTTGGCCTTAACGTTATCGATGGTGTCAGAGCTCTCCACCTCCAAAGTGATCGTC 11141755 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| || ||||| ||||| Sbjct 11141756 TTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 11141787 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGT 45185 |||||||| ||||| ||||||||| ||||||||||| || ||| | |||| | Sbjct 11141807 ACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTT--CTCCCGTCTT 11141864 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 ||| || ||||| || || || | || ||| || || ||||| | || ||||||||| Sbjct 11141865 CCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCT 11141924 Query 45246 CAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 | | ||||||| | || | | | | |||| | |||||||| | ||| || ||| Sbjct 11141925 GGA-TCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTC 11141983 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||| ||||| ||||| Sbjct 11141984 TTCCCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| |||| ||||| || ||||||||||| Sbjct 15816611 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAA 15816552 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| ||||| ||||| | || ||||||||| || || ||| || Sbjct 15816551 GATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 15816492 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| || || || | ||| || ||||| ||||| || || ||||| Sbjct 15816491 GTCGATGGTGTCGGAGGATTCGACTTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCAC 15816432 Query 45325 AAAGATTTGCATGTT 45339 ||||| ||||| || Sbjct 15816431 GAAGATCTGCATCTT 15816417 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| ||||||||||| || ||| | || || Sbjct 34860945 ACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCG 34861004 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | ||||| ||||| ||||| | || |||||||| Sbjct 34861005 AGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGG 34861064 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| || ||| ||||||| || || |||||| Sbjct 34861065 ATCTTGGCCTTCACGTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTCTTG 34861124 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||| || ||||| Sbjct 34861125 CCGGTAAGGGTCTTGACAAATATCTGCAT 34861153 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| ||||| |||||| || |||||||||||| || | |||| Sbjct 34861854 AAGACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGCCAAAGTCCTGCCGTCT 34861913 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||||||||| || | || ||| || || ||||| | || ||||||||| Sbjct 34861914 TCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 34861973 Query 45245 GCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | | || |||| | || | | | | |||| | || ||||| | ||| || || Sbjct 34861974 TGGA-TCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGT 34862032 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || || || || ||||||||||| ||||| Sbjct 34862033 CTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 34862065 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| |||||||| ||| || |||| | || || Sbjct 34860717 ACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCATCCTCG 34860776 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || || || | ||||| || || ||||| | || |||||||| | Sbjct 34860777 AGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGA 34860836 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | || ||||||||| Sbjct 34860837 ATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCAAGCGTGATCGTCTTG 34860896 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| || || || ||||| Sbjct 34860897 CCGGTCAATGTCTTAACGAAAATCTGCAT 34860925 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| ||||| ||||||||| || ||||| || || | |||| Sbjct 34861626 AAGACCAAGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGCCAAGGTCCTGCCGTCT 34861685 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| || ||||||||||| || | || ||| || || || || | |||||||| ||| Sbjct 34861686 TCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGGATTCCCTCCTTATCC 34861745 Query 45245 GCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | | || |||| | || | | | | |||| | ||||||||||| || || || Sbjct 34861746 TGGA-TCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTGATAGT 34861804 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||| || |||| ||||| || || || |||||| Sbjct 34861805 CTTTCCGGTCAACGTCTTGACGAAAATCTGCATG 34861838 >seq9 Length=54679868 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||| ||||||||||||||||| || ||| | || Sbjct 23042449 AACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATCC 23042508 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| ||||| ||||| ||||||||||| | |||||||||||| Sbjct 23042509 TCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCT 23042568 Query 45245 GCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | | || |||| || | | | | |||| | ||||||||| | || || || Sbjct 23042569 TGGA-TCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGATAGT 23042627 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || || |||||||| || ||||| ||||| Sbjct 23042628 CTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 23042660 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||| || || || ||| ||||||||||||||||| || ||| | || Sbjct 23042221 AACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATCC 23042280 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || || ||||| || | ||||| ||||| || || | |||||||||||| Sbjct 23042281 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 23042340 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||| || | | | |||| | ||| || || | ||| |||||| Sbjct 23042341 TGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACTTCGAGGGTGATCGTC 23042400 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||||||||||||||| |||||| Sbjct 23042401 TTTCCGGTAAGAGTCTTCACAAAGATCTGCATG 23042433 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| || | |||| || || || ||||||||| ||||||||||| Sbjct 53991273 CCACCTCTCAACCTGAGAACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCG 53991214 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | || || || || || |||||||| || | || ||| ||||| ||||| Sbjct 53991213 AGAGTCCTTCCATCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 53991154 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | |||| | ||| ||| Sbjct 53991153 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACC 53991094 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||||| |||||||| || ||||| ||||| || |||||||| Sbjct 53991093 TCGAGAGTAATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 53991047 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||| || || | | | || || || ||||| || ||||| Sbjct 53991922 CTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTACCATCCTCAAGCTGTTTACCAGCGAA 53991863 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | | ||||||||| ||||| | || ||||||||| ||| || ||| || Sbjct 53991862 GATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATT 53991803 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | ||| || |||| ||| || |||||||| |||| ||||||||| Sbjct 53991802 GTCTATCGTGTCTGAGCTCTCAACTTCCAAGGTTATAGTCTTGCCTGTCAAAGTCTTCAC 53991743 Query 45325 AAAGATTTGCAT 45336 ||| |||||||| Sbjct 53991742 AAATATTTGCAT 53991731 >seq6 Length=39822476 Score = 102 bits (112), Expect = 6e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183 ||| |||||||| || || ||| ||||| ||||||||||| || |||| | || Sbjct 26071109 TAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATC 26071050 Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || ||||| || || ||||| |||| ||||| ||||| ||||| | |||||| || || Sbjct 26071049 CTCGAGTTGCTTGCCTGCGAAGATCAGACGCTGCTGGTCCGGAGGAATACCCTCTTTATC 26070990 Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | ||| || ||| || | | | || || ||||||||||| || || || Sbjct 26070989 CTGAATCTTGGCCTTCACGTTGTCAATAGTATCTGAACTCTCCACCTCCAAAGTGATTGT 26070930 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||| || |||| ||||| ||||| || |||||| Sbjct 26070929 CTTCCCGGTCAATGTCTTAACAAAAATCTGCATG 26070896 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || || |||| ||||| ||| Sbjct 23704389 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGT 23704330 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| |||| ||||| ||||| ||||| | || ||||||||| || || Sbjct 23704329 TTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 23704270 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| ||| ||||| | ||| || ||||| ||||| Sbjct 23704269 GCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCCGTT 23704210 Query 45314 AGAGTCTTCACAAAGATTTGCATGTT 45339 || || || || ||||| ||||| || Sbjct 23704209 AGGGTTTTAACGAAGATCTGCATCTT 23704184 >seq4 Length=53719093 Score = 100 bits (110), Expect = 2e-16 Identities = 153/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || |||||| |||||||||||||| || | | |||| Sbjct 28156504 AACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGCCAATGTTCTGCCGTCT 28156445 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| ||||||| ||| ||||| ||||| | |||||||||||| Sbjct 28156444 TCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCT 28156385 Query 45245 GCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCT-CCACCTCCACGGTAATCG 45302 | | ||||||| || | | | | || | || ||||||||| ||||| | Sbjct 28156384 TGGA-TCTTTGCTTTGACGTTGTCAATAGTATCGGAGCTCTCCCACCTCCAATGTAATAG 28156326 Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || |||| ||||| |||||||| ||||| Sbjct 28156325 TTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 >seq8 Length=41758685 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || ||| |||| || || || Sbjct 33346239 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCGAGCTGC 33346180 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| |||| ||||| ||||||||||| | || ||||||||| || || Sbjct 33346179 TTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTG 33346120 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| ||| ||||| | ||| || || || ||||| Sbjct 33346119 GCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTCCCCGTT 33346060 Query 45314 AGAGTCTTCACAAAGATTTGCATGTT 45339 || || ||||| ||||| ||||| || Sbjct 33346059 AGGGTTTTCACGAAGATCTGCATCTT 33346034 >seq5 Length=46902585 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||| ||| || | ||| | || || || || || ||||| || Sbjct 33725060 CTCCTTCTGAATGTTGTAATCGGCCAATGTACGACCATCCTCAAGCTGCTTGCCGGCAAA 33725001 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||| ||||| ||||| || || | ||||||||||| || || ||| || Sbjct 33725000 GATCAAACGCTGCTGGTCAGGCGGGATTCCCTCCTTGTCTTGTATCTTGGCCTTGACGTT 33724941 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | ||||||||| | || ||||| || ||||| | ||||| || Sbjct 33724940 ATCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGATCGTTTTTCCCGTTAAGGTCTTGAC 33724881 Query 45325 AAAGATTTGCATG 45337 |||||| |||||| Sbjct 33724880 AAAGATCTGCATG 33724868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394916854600606