Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 seq1 116 4e-21 seq4 105 7e-18 seq8 104 2e-17 seq9 89.7 5e-13 >seq3 Length=64984695 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||||| |||||||| || || ||||| |||||| Sbjct 34860698 GCCACCACGGAGACGAAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGC 34860757 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| || |||||||| || |||||| |||| ||||| |||||||| ||||| Sbjct 34860758 CAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGG 34860817 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCA 139715 |||||||| ||||| ||| | || | || | | || || |||| | | ||||| Sbjct 34860818 GATGCCTTCCTTGTCT-TGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCA 34860876 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| || | ||||||||||||||| || || ||||| || ||||| Sbjct 34860877 CCTCAAGCGTGATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 34860925 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| || ||||| || || ||||| || || | Sbjct 11141105 CCTCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCC 11141164 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || |||||||| || || || |||| ||||| ||||| || ||||| Sbjct 11141165 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGA 11141224 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| || || | | || | ||||||| | ||||||| Sbjct 11141225 ATACCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACC 11141284 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | |||||||||||||| || || ||||| || |||||| Sbjct 11141285 TCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCATA 11141332 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGAGTCTTC 139614 || ||||||| || ||||| ||||||||||| || || ||| | |||| || || Sbjct 16418757 ACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCTAAG-GTGCGACCATCCTC 16418815 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 ||||| || ||||| |||| ||||| ||||| || ||||| |||||||||||||| Sbjct 16418816 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCTTTGTCTTG 16418875 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| || || | | || | ||||||| | ||||||||| | || | ||||| Sbjct 16418876 GATCTTGGCCTTCACGTTATCAATAGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTT 16418935 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| | || || ||||| || ||||| Sbjct 16418936 GCCGGTAAGAGTCTTCACGAAGATCTGCAT 16418965 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| |||||| || ||||| | ||||||||| || || || || ||||| Sbjct 34861610 GCCTCCGCGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGC 34861669 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || || |||||| | ||| || || || |||| || | |||||||| || || Sbjct 34861670 CAAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGG 34861729 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || ||| || ||| | | || | ||||| | | |||||| Sbjct 34861730 GATTCCCTCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTCTCCAC 34861789 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||| ||||||||||| || ||||| || ||||| Sbjct 34861790 CTCCAAAGTGATAGTCTTTCCGGTCAACGTCTTGACGAAAATCTGCAT 34861837 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||||||| || || ||||| || ||| || || || |||||| ||||| Sbjct 16419219 TGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTTCTGCCGTCTTCAAGCTGC 16419278 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || | || || | |||||||||||||| || ||||| ||||| ||| | || Sbjct 16419279 TTTCCGGCGAAAATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTC-CTGAATCTT 16419337 Query 139682 TGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | |||| | | || | ||||| | | |||||||| | ||| | ||||| || || Sbjct 16419338 GGCTTTAACGTTGTCAATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCGT 16419397 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | || || ||||| || ||||| Sbjct 16419398 GAGAGTCTTAACGAAGATCTGCAT 16419421 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| |||||| || ||||| | |||||||| || || ||||| || || Sbjct 59730413 GCCTCCACGTAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGC 59730354 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | || | || | || || | ||| || || || |||||| | ||||||||||| | Sbjct 59730353 GAGAGTACGTCCA-TCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCGGGGG 59730295 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | |||||||| || || ||| || ||| | | || | ||||| | | ||||| Sbjct 59730294 GGATGCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCCGAGCTCTCCA 59730235 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | ||||| ||||| | || || ||||| || ||||| Sbjct 59730234 CCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 59730186 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || ||||| || || ||||| || || || || | || ||| Sbjct 34860945 ACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCG 34861004 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 |||||||| ||||| |||| ||||| ||||| || ||||| |||||||| ||||| | Sbjct 34861005 AGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGG 34861064 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||| | ||| ||||| | || | |||||| Sbjct 34861065 ATCTTGGCCTTCACGTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTCTTG 34861124 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||||| | || || || ||||| |||||| || Sbjct 34861125 CCGGTAAGGGTCTTGACAAATATCTGCATACCT 34861157 >seq1 Length=43764888 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| ||||| || ||||||| ||||| || || || ||||| ||||| Sbjct 35467010 GCCTCCACGTAGACGCAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCTGC 35466951 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| || |||||||| || |||||| |||||| | ||||| || || || Sbjct 35466950 CAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGG 35466891 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| ||| || ||| | | || | ||||||| | || || Sbjct 35466890 GATACCCTCTTTGTCTTGGATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCAAC 35466831 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | |||||| || |||||||| || ||||||||||||||| Sbjct 35466830 CTCCAAAGTGATCGTCTTTCCCGTCAACGTCTTAACGAATATTTGCATA 35466782 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || || || | ||| | || ||||||| || ||||| || |||||||| ||||| ||| Sbjct 35467693 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCT 35467634 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || |||||||| || ||||| |||| ||||| ||||| || ||||| Sbjct 35467633 AAG-GTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 35467575 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| || || | | || | ||||||| | |||||| Sbjct 35467574 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCAC 35467515 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | |||||||||||||| || || || || || |||||| Sbjct 35467514 CTCCAGTGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAAATCTGCATA 35467466 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || ||||| || || ||||| || || | |||| || || Sbjct 35467447 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGACCATCCTCA 35467388 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || ||||| |||| ||||| ||||| || ||||| |||||||| ||||| | Sbjct 35467387 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 35467328 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||| | | ||| ||||| | || | |||||| Sbjct 35467327 ATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAATGTGATAGTCTTG 35467268 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || || || ||||||||||| Sbjct 35467267 CCGGTAAGGGTCTTCACAAATATTTGCAT 35467239 >seq4 Length=53719093 Score = 105 bits (116), Expect = 7e-18 Identities = 162/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||||| || ||||||| |||||||| ||||||||||| || || Sbjct 28156520 GCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGC 28156461 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || ||| || |||||| ||||| || || || |||||| | ||||| || ||||| Sbjct 28156460 CAATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 28156401 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCT-CCA 139715 || || || ||||| ||| ||| ||| | | || | || |||| | || ||| Sbjct 28156400 AATACCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCAATAGTATCGGAGCTCTCCCA 28156341 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | || | || || || |||||||| || || || || |||||| Sbjct 28156340 CCTCCAATGTAATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCATA 28156291 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||| | |||||||||||| ||||| || || || Sbjct 7247645 CCACCGCGGAGACGAAGCACGAGGTGGAGCGTAGACTCTTTCTGAATATTGTAGTCAGCG 7247704 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| | || || ||||| ||||| || |||| || | ||||| || ||||| Sbjct 7247705 AGCGTGCGCCCATCCTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 7247764 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | ||||||| | ||| ||| Sbjct 7247765 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCGACC 7247824 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||||||||| | ||||| ||||| |||||||| Sbjct 7247825 TCGAGAGTAATGGTCTTGCCGGTTAGAGTTTTCACGAAAATTTGCAT 7247871 >seq8 Length=41758685 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 |||||||||||||| ||||| |||||| || |||||||| ||||| || ||||||||| Sbjct 28102472 TCTTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCCGGAGGGATACCTTCTTTG 28102413 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| || ||| ||||| | ||| | Sbjct 28102412 TCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATG 28102353 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||||||| ||||| ||||| || ||||| Sbjct 28102352 GTCTTCCCGGTCAGGGTTTTCACGAAGATCTGCAT 28102318 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| ||||| || || ||||| || ||| | |||| |||||||||||| Sbjct 33346239 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCGAGCTGC 33346180 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || | ||||| || ||||| |||||||| || ||||| ||||| ||| || Sbjct 33346179 TTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTG 33346120 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||||| || ||| ||||| | ||| | || || || || Sbjct 33346119 GCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTCCCCGTT 33346060 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 33346059 AGGGTTTTCACGAAGATCTGCAT 33346037 >seq9 Length=54679868 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| || | ||||| || ||||| || || ||||| ||||| | Sbjct 53991957 CCACCACGAAGACGCAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 53991898 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || |||||||||||||| |||| || | || || || ||||| Sbjct 53991897 AAAGTCCTACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 53991838 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | || | | || | ||||| | | ||| || Sbjct 53991837 ATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTGTCTATCGTGTCTGAGCTCTCAAC 53991779 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||| ||||| || || || ||||||||||| Sbjct 53991778 TTCCAAGGTTATAGTCTTGCCTGTCAAAGTCTTCACAAATATTTGCAT 53991731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495860080491200