Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 152 1e-31 seq7 141 2e-28 seq8 132 1e-25 seq5 123 6e-23 seq4 122 2e-22 seq9 118 2e-21 seq1 118 2e-21 seq6 107 4e-18 >seq3 Length=64984695 Score = 152 bits (168), Expect = 1e-31 Identities = 167/221 (76%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | ||||| || ||||| || || ||||| | | |||||| Sbjct 16419204 AGCCTGAGAACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTTCTG 16419263 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| || || ||||| || ||||| |||||||| ||||| ||||| || ||||| Sbjct 16419264 CCGTCTTCAAGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGATCGGGAGGGATACCTTCC 16419323 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||||||||| ||||| || || || | ||| || ||| ||| ||||| || Sbjct 16419324 TTGTCCTGAATCTTGGCTTTAACGTTGTCAATGGTGTCAGAGCT---TTCCACCTCGAGG 16419380 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || || || |||||||| Sbjct 16419381 GTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 16419421 Score = 147 bits (162), Expect = 5e-30 Identities = 166/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | ||||| || ||||| || || ||||||| | ||||| Sbjct 11141798 AGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTC 11141857 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| | || ||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct 11141858 CCGTCTTCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCC 11141917 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||| ||||||||||| || || || | ||| || ||| ||| ||||| || Sbjct 11141918 TTGTCCTGGATCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCT---TTCCACCTCGAGG 11141974 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || ||||| || || |||||||| Sbjct 11141975 GTGATGGTCTTCCCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 Score = 122 bits (134), Expect = 2e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | |||||||||||||| || || ||||||| ||||| || Sbjct 34861392 AGCCTGAGGACGAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGCAAGAGTCCTT 34861451 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || | || || || ||||| || | |||||| || || || || ||||| || Sbjct 34861452 CCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCC 34861511 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 |||||||| ||||| || || ||||| || | || || || | || ||||| | || Sbjct 34861512 TTATCCTGGATCTTGGCCTTGACATTATCAATAGTGTC-AGAGCTCTCCACCTCCAAAGT 34861570 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || || | || || || || |||||||| Sbjct 34861571 GATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 34861609 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || ||||||||||| || |||||||||| | ||| | | Sbjct 11141342 AGCCTGAGCACCAAGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGA 11141401 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || ||||| ||||| || || || | ||| || || ||||| || || ||| Sbjct 11141402 CCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCCTCT 11141461 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| || || ||||| || || || | ||| ||| | || |||||||| || Sbjct 11141462 TTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTG 11141521 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || | || || || || || ||||| Sbjct 11141522 ATCGTCTTTCCTGTTAAAGTCTTCACGAAGATTTGCAT 11141559 Score = 109 bits (120), Expect = 1e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||||| || ||||| || || || || | | || | ||| || Sbjct 34860713 AAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCATC 34860772 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||||||||| || || | ||| ||||| ||||| || ||||| || || Sbjct 34860773 CTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTC 34860832 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 |||||||| || || ||||| || | ||| || || | || ||||| || || || | Sbjct 34860833 TTGAATCTTGGCCTTGACATTGTCAATGGTGTC-TGAGCTCTCCACCTCAAGCGTGATCG 34860891 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || | ||| || || || |||||||| Sbjct 34860892 TCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 34860925 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || || || ||||| || || ||||| | | ||| | | Sbjct 34860936 AGCCTGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGA 34860995 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || ||||| ||||| || || || | ||| || || ||||| || ||||| Sbjct 34860996 CCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCC 34861055 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || || ||||| || || || || || | || || | || ||||| | ||| Sbjct 34861056 TTGTCTTGGATCTTGGCCTTCACGTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTG 34861115 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| || || |||||||||||||| Sbjct 34861116 ATGGTCTTGCCGGTAAGGGTCTTGACAAATATCTGCAT 34861153 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||||||||| || || ||||||| |||||| || || || || | || || || Sbjct 34861185 GTAGATTCTTTCTGGATGTTGTAGTCAGCTAGAGTCCTTCCATCCTCCAACTGCTTGCCG 34861244 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || || || || || || || || || || ||||| ||||| Sbjct 34861245 GCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCTTTC 34861304 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || || | || ||||| | ||||| ||||| || || | || Sbjct 34861305 ACGTTGTCAATAGTGTC-TGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCCGTCAAGGT 34861363 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 34861364 CTTGACAAAAATTTGCAT 34861381 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||| | | || || || || || | || || || Sbjct 11141591 GTCGACTCTTTCTGAATGTTGTAGTCGGCCAAGGTCCTGCCATCCTCCAACTGCTTGCCG 11141650 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || || || || ||||| || |||||||| ||||| || || Sbjct 11141651 GCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTA 11141710 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || || | || ||||| | || || ||||| || ||||| || Sbjct 11141711 ACGTTATCGATGGTGTC-AGAGCTCTCCACCTCCAAAGTGATCGTCTTTCCGGTAAGGGT 11141769 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 11141770 CTTGACGAAGATCTGCAT 11141787 Score = 84.2 bits (92), Expect = 5e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||| || || || || || ||||| | | || || | ||| || || || | ||| || Sbjct 34698675 TGTTGACTCCTTTTGGATGTTATAATATGCAAGCGTGCGACCATCCTCGAGGTTTTTACC 34698734 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 |||||| | | |||||| | | || || | ||||| || || ||||||||||| || Sbjct 34698735 AGCAAACGTGATTCTCTGTCGGTTTGGTGGGAGCCCTTCCTTGTCTTGAATCTTTGCCTT 34698794 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 ||||| || || | || || | || || ||| ||||| || ||||||| || | Sbjct 34698795 CACATTCTCAACAATGTC-TGAGCTGTCAACTACTAAGGTAATGGTTTTACCAGAGAGCG 34698853 Query 104541 TTTTTACAAATATCTGCATT 104560 |||| |||||||| |||||| Sbjct 34698854 TTTTCACAAATATTTGCATT 34698873 >seq7 Length=48366697 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| |||| || || | || | || || || ||||| || || ||||| | Sbjct 20455719 TCCTCCTCTCAGCCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 20455778 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || || |||||||| || || || || ||||| || || | ||| || || || || Sbjct 20455779 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGG 20455838 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| || ||||||||||| || || ||||| || | || ||| | ||| || Sbjct 20455839 GATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCAAC 20455898 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||||||| || ||||| || || || ||||| ||||| ||||||||||| Sbjct 20455899 CTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 20455949 Score = 113 bits (124), Expect = 1e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || ||||| | || |||||||||||||||||||| || ||| Sbjct 15363300 GTGGACTCTTTCTGGATGTTGTAGTCCGCAAGGGTTCTACCGTCTTCTAGTTGCTTCCCA 15363241 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || || || |||||||| ||||| || |||||||||||||| ||||| Sbjct 15363240 GCGAAGATCAGCCTCTGCTGATCCGGCGGTATTCCTTCTTTGTCCTG 15363194 >seq8 Length=41758685 Score = 132 bits (146), Expect = 1e-25 Identities = 149/198 (75%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| || || ||||||| ||||| | || ||||| || ||||||||||| || | Sbjct 28102507 CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGA 28102448 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | | ||| ||||| ||||| || |||||||| || || ||||| || || ||||| | Sbjct 28102447 TCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 28102388 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | ||| ||| | || ||||| || || || ||||| || || || ||||| || | Sbjct 28102387 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCACGA 28102328 Query 104550 ATATCTGCAT-TTTGTGT 104566 | |||||||| ||||||| Sbjct 28102327 AGATCTGCATCTTTGTGT 28102310 Score = 122 bits (134), Expect = 2e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || || || ||||| || || | || | || || ||||||||||| || ||||||| | Sbjct 10683472 CCACCCCTAAGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCT 10683413 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || |||| ||| || || |||||||| |||||||| || ||||||||||||||||| ||| Sbjct 10683412 AGCGTTCGACCATCCTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCAGGTGGT 10683353 Query 104453 ATTCCTTCTTTATCCTG 104469 || || ||||| ||||| Sbjct 10683352 ATCCCCTCTTTGTCCTG 10683336 >seq5 Length=46902585 Score = 123 bits (136), Expect = 6e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| || | || || || || | || || || ||||| || || || || | Sbjct 12956450 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 12956391 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || || |||||||| || || || || || || || || | ||| ||||| || || Sbjct 12956390 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGG 12956331 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| || ||||| ||||| || || ||||| || | || ||| | ||| || Sbjct 12956330 GATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 12956271 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || ||||| || || || ||||| ||||| ||||||||||| Sbjct 12956270 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 12956220 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || ||||| | ||| || | ||| || || || || |||||| Sbjct 33725293 GTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCATCCTCAAGCTGCTTTCCA 33725234 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || ||||| || || || ||||| || || Sbjct 33725233 GCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 33725174 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || ||| || | || ||||| ||||| || ||||||||||| | || Sbjct 33725173 ACGTTATCAATCGTGTCGG-AGCTCTCGACCTCCAGTGTGATGGTCTTACCAGTCAACGT 33725115 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 33725114 CTTGACAAAGATTTGCAT 33725097 >seq4 Length=53719093 Score = 122 bits (134), Expect = 2e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||||| |||||||||||||| ||||||| || || | || || Sbjct 7247659 AAGCACGAGGTGGAGCGTAGACTCTTTCTGAATATTGTAGTCAGCGAGCGTGCGCCCATC 7247718 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || || || |||||||| || || ||||| || ||||| || || Sbjct 7247719 CTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTC 7247778 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| ||||| || || || || || | || ||| || | || ||||| || ||||| | Sbjct 7247779 CTGGATCTTAGCCTTGACGTTGTCAATAGTGTCG-GAGCTCTCGACCTCGAGAGTAATGG 7247837 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || || ||||| || || || ||||| Sbjct 7247838 TCTTGCCGGTTAGAGTTTTCACGAAAATTTGCAT 7247871 Score = 116 bits (128), Expect = 9e-21 Identities = 147/200 (74%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||| || || ||||| || ||||| | | ||||| |||||||| || || || || Sbjct 28156490 TGTAGACTCCTTTTGAATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGCTTGCC 28156431 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 || || || | |||||| || || ||||| || || || || || || ||||||||||| Sbjct 28156430 GGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTT 28156371 Query 104482 TACATTTTCTACGGTATCGCTAG--GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || || || | |||||| || | | ||||| | ||||||||| || ||||| | Sbjct 28156370 GACGTTGTCAATAGTATCG-GAGCTCTCCCACCTCCAATGTAATAGTTTTTCCAGTCAAC 28156312 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| |||||||| Sbjct 28156311 GTCTTGACAAAGATCTGCAT 28156292 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 |||||||| ||||| |||||||| || ||||| || | ||| || || || ||||| Sbjct 49158730 CCTTCTTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCACTGCTCTCAACCTCG 49158671 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || ||||| ||||| ||||| | ||||||||| ||||||||||| || Sbjct 49158670 AGGGTAATGGTCTTGCCAGTCAATGTTTTTACGAATATCTGCATCTT 49158624 >seq9 Length=54679868 Score = 118 bits (130), Expect = 2e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || |||| | ||| ||||| || || || ||||| ||| Sbjct 53991927 GTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTACCATCCTCAAGCTGTTTACCA 53991868 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || |||||||| || ||||| || ||||| || ||||||||||| || || Sbjct 53991867 GCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTG 53991808 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| |||| || || || | || || || | || |||||||| || || | || Sbjct 53991807 ACATTGTCTATCGTGTC-TGAGCTCTCAACTTCCAAGGTTATAGTCTTGCCTGTCAAAGT 53991749 Query 104542 TTTTACAAATATCTGCATT 104560 || |||||||| |||||| Sbjct 53991748 CTTCACAAATATTTGCATT 53991730 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||||| | || | ||| || || || || || ||| Sbjct 23042236 GTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATCCTCGAGCTGCTTGCCA 23042295 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || ||||| || || ||||||||||| || || Sbjct 23042296 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTG 23042355 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | || || || || || || ||||| || ||||| || Sbjct 23042356 ACGTTGTCAATGGTGTCG-GAGCTCTCAACTTCGAGGGTGATCGTCTTTCCGGTAAGAGT 23042414 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 23042415 CTTCACAAAGATCTGCAT 23042432 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||||| | || | ||| || || || || || || Sbjct 23042464 GTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATCCTCGAGCTGCTTGCCG 23042523 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| || || ||||| || || || || || || ||||| ||||| Sbjct 23042524 GCGAAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCTTGGATCTTAGCTTTC 23042583 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | || ||||| ||||| |||||||| || || || || Sbjct 23042584 ACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCGAGTGTGATAGTCTTTCCGGTGAGAGT 23042642 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 23042643 CTTAACGAAGATCTGCAT 23042660 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| ||||| || || | || || | ||| || || || ||||| ||| Sbjct 53991699 GTAGACTCCTTCTGGATATTGTAATCCGCAAGCGTACGACCATCCTCGAGCTGTTTCCCA 53991640 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || ||||| || || || || || ||||| || ||||||||||| || || Sbjct 53991639 GCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTCGCCTTC 53991580 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || ||||| | || || || || || || || || Sbjct 53991579 ACATTGTCAATCGTGTC-AGAGCTCTCCACCTCCAAAGTTATTGTTTTGCCGGTGAGGGT 53991521 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 53991520 CTTGACAAAAATCTGCAT 53991503 Score = 91.5 bits (100), Expect = 3e-13 Identities = 108/145 (74%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 104418 TTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTG 104477 ||||||| || || || | ||| ||||| ||||| || ||||| |||||||||||||| | Sbjct 23025706 TTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTGG 23025765 Query 104478 CTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAG 104534 | || || || || | || || ||| ||| ||||| || || || ||||| || | Sbjct 23025766 CCTTGACGTTATCAATCGTGTCTGAGCT---TTCAACCTCCAGGGTGATGGTCTTGCCGG 23025822 Query 104535 TAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || || || |||||||| Sbjct 23025823 TAAGGGTCTTCACGAAGATCTGCAT 23025847 >seq1 Length=43764888 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | ||||| || |||||||| || || || | | || || Sbjct 35467228 AGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTG 35467169 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| | ||| ||||||||||| || |||||||| || || ||||| || || || Sbjct 35467168 CCATCTTCCAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCC 35467109 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| || || ||||| ||||| || | ||| ||| | || |||||||| || Sbjct 35467108 TTGTCCTGGATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTG 35467049 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || | || || || || || ||||| Sbjct 35467048 ATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 35467011 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| || || || || | | || | ||| || || || || |||||| Sbjct 35466979 GTAGATTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCA 35466920 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || || || || || || ||||| || || ||||| ||||| Sbjct 35466919 GCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTG 35466860 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||| ||| ||||| | || || ||||| || || | || Sbjct 35466859 ACATTGTCAATAGTGTCGGAGCTTTCAACCTCCAAAGTGATCGTCTTTCCCGTCAACGTC 35466800 Query 104543 TTTACAAATATCTGCAT 104559 || || ||||| ||||| Sbjct 35466799 TTAACGAATATTTGCAT 35466783 >seq6 Length=39822476 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || ||||||| | || | ||| || || ||||| || || Sbjct 26071093 GTCGACTCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTCGAGTTGCTTGCCT 26071034 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || || ||||||||||||||||| || || Sbjct 26071033 GCGAAGATCAGACGCTGCTGGTCCGGAGGAATACCCTCTTTATCCTGAATCTTGGCCTTC 26070974 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||||| | || ||||| | || || ||||| || || | ||| Sbjct 26070973 ACGTTGTCAATAGTATCTGAACTCTCCACCTCCAAAGTGATTGTCTTCCCGGTCAATGTC 26070914 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 26070913 TTAACAAAAATCTGCAT 26070897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150913256125288