Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3 120 2e-22 seq4 109 4e-19 seq6 102 7e-17 seq1 87.8 1e-12 seq9 86.0 5e-12 seq7 86.0 5e-12 >seq3 Length=64984695 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || ||||| |||||||| || ||||||||||| ||| Sbjct 11141789 CCACCACGAAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCC 11141848 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | |||| ||||| || || || ||| | ||||||| ||| || ||| ||| Sbjct 11141849 AAGGTTCTCCCGTCTTCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 11141908 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || |||||| || || | | | | ||||| | ||| Sbjct 11141909 ATGCCTTCCTTGTCCTGGATCTTTGCT--TTAACGTTGTCGATGGTGTCAGAGCTTTCCA 11141966 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || ||||| || || |||||||| Sbjct 11141967 CCTCGAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || ||||||||||| ||||||||||| || Sbjct 16418739 CCACCACGGAGCCTTAGGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCT 16418798 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || ||||| || | || || ||||| |||||| ||| Sbjct 16418799 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 16418858 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| || || || |||||| | | | ||||||| | |||| Sbjct 16418859 ATGCCTTCTTTGTCTTGGATCTTGGC--CTTCACGTTATCAATAGTGTCGGAGCTCTCCA 16418916 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || ||||| || || || || || |||||||| Sbjct 16418917 CCTCCAGTGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 16418965 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | || |||| || ||||| ||||||||||| ||||||||||||||| Sbjct 34861839 CCTCCACGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGCC 34861898 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || |||| || | || || || || | || |||| ||| || ||| ||| Sbjct 34861899 AAAGTCCTGCCGTCTTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGA 34861958 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || ||| || || | | | | ||||| | || Sbjct 34861959 ATGCCTTCCTTGTCCTGGATCTTGGCT--TTAACGTTGTCGATGGTGTCAGAGCTTTCAA 34862016 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| |||||||| || ||||| ||||| |||||||| Sbjct 34862017 CCTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 34862065 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | || |||| || || || ||||| || || ||||||||||||||| Sbjct 11141561 CCTCCACGTAGACGCAAGACCAGGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCGGCC 11141620 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | |||||||| || ||||| ||| | || | || ||| |||||| || Sbjct 11141621 AAGGTCCTGCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 11141680 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || ||| || | | | ||||| | |||| Sbjct 11141681 ATTCCCTCCTTATCCTGGATCTTGGC--CTTAACGTTATCGATGGTGTCAGAGCTCTCCA 11141738 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || |||||||| || || ||||| || |||||||| Sbjct 11141739 CCTCCAAAGTGATCGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 11141787 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | || |||| || ||||| |||||||| || || ||||| || ||| Sbjct 34861611 CCTCCGCGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGCC 34861670 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| ||||| || || || || | || |||| ||| || ||| || Sbjct 34861671 AAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGG 34861730 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || ||| || || | | | | ||||| | |||| Sbjct 34861731 ATTCCCTCCTTATCCTGGATCTTGGCT--TTAACGTTGTCGATGGTGTCAGAGCTCTCCA 34861788 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || |||||||||| ||| ||||| ||||||||||| Sbjct 34861789 CCTCCAAAGTGATAGTCTTTCCGGTCAACGTCTTGACGAAAATCTGCAT 34861837 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || ||||| || |||| || || || |||||||| || ||||||||||| || Sbjct 34860926 CCCACCACGAAGCCTGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGC 34860985 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | ||||| | |||||||| || | || || ||||| ||||| ||| Sbjct 34860986 CAAAGTACGACCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 34861045 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || || || |||||| | | | |||||| ||| Sbjct 34861046 GATGCCTTCCTTGTCTTGGATCTTGGC--CTTCACGTTATCAATAGTGTCCGAACTCTCA 34861103 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || ||||| || || |||||||| |||||||| Sbjct 34861104 ACCTCCAATGTGATGGTCTTGCCGGTAAGGGTCTTGACAAATATCTGCAT 34861153 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || ||||| |||||||| || ||||||||||| || Sbjct 16418967 CCACCACGCAGACGCAGCACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCT 16419026 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| || | || || || ||| | || | | ||| |||||| ||| Sbjct 16419027 AAGGTACGACCGTCTTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGA 16419086 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || ||| || || | | | | |||||| | ||| Sbjct 16419087 ATGCCTTCCTTGTCTTGGATCTTGGCT--TTGACGTTGTCGATGGTGTCGGAGCTCTCAA 16419144 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| |||||||||| || |||||||| |||||||| Sbjct 16419145 CCTCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 16419193 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| ||||| |||||||| || ||||||||||||||| Sbjct 16419195 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16419254 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || || || || |||| |||| ||| || || ||| Sbjct 16419255 AAAGTTCTGCCGTCTTCAAGCTGCTTTCCGGCGAAAATGAGCCTCTGCTGATCGGGAGGG 16419314 Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || ||| || || | | | | ||||| | ||| Sbjct 16419315 ATACCTTCCTTGTCCTGAATCTTGGCT--TTAACGTTGTCAATGGTGTCAGAGCTTTCCA 16419372 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| || || || || || || |||||||| Sbjct 16419373 CCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 16419421 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || ||||||||||| || ||||||||||| ||| Sbjct 11141105 CCTCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCC 11141164 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || || || || | || || ||||| ||||| ||| Sbjct 11141165 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGA 11141224 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || |||||| | | | | |||||| | |||| Sbjct 11141225 ATACCTTCCTTGTCTTGGATCTTGGC--CTTCACGTTGTCAATGGTGTCGGAGCTCTCCA 11141282 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||||| || || || ||||||||||| Sbjct 11141283 CCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCAT 11141331 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | | |||| || ||||| || || || || ||||||||||| || Sbjct 34861155 CCTCCACGTAGACGTAAGACCAGGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCT 34861214 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | |||||||| || ||||| ||| | || | || ||| |||||| || Sbjct 34861215 AGAGTCCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 34861274 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || ||| ||||| | | | | |||||| | |||| Sbjct 34861275 ATCCCCTCCTTGTCTTGGATCTTGGCT--TTCACGTTGTCAATAGTGTCTGAGCTCTCCA 34861332 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || || |||| || ||||||||||| ||||| Sbjct 34861333 CCTCCAAAGTAATCGTCTTCCCCGTCAAGGTCTTGACAAAAATTTGCAT 34861381 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| ||||||||| || Sbjct 15816622 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGC 15816563 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || ||||| |||||| ||| | ||| || ||||| || || Sbjct 15816562 TTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 15816503 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| || || ||| | |||||| || || || | Sbjct 15816502 GC--CTTGACATTGTCGATGGTGTCGGAGGATTCGACTTCGAGGGTGATTGTCTTCCCCG 15816445 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || || |||||||| || Sbjct 15816444 TTAGGGTTTTCACGAAGATCTGCATCTT 15816417 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || || || || || ||||||||||| || Sbjct 34861383 CCACCACGGAGCCTGAGGACGAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGCA 34861442 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | |||||||| || ||||| ||| | || | || ||| |||||| || Sbjct 34861443 AGAGTCCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 34861502 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || ||| || | | | |||||| | |||| Sbjct 34861503 ATTCCCTCCTTATCCTGGATCTTGGC--CTTGACATTATCAATAGTGTCAGAGCTCTCCA 34861560 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || |||||||||| || ||||| || |||||||| Sbjct 34861561 CCTCCAAAGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 34861609 >seq4 Length=53719093 Score = 109 bits (120), Expect = 4e-19 Identities = 164/230 (71%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || ||||||||||| ||||||||||| ||| Sbjct 28156519 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGCC 28156460 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || ||||| || | || | || ||| |||||| ||| Sbjct 28156459 AATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 28156400 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCT-CC 16885 | ||||| ||||| || |||||| || || | | | | ||| ||| | || || Sbjct 28156399 ATACCCTCCTTGTCTTGGATCTTTGCT--TTGACGTTGTCAATAGTATCGGAGCTCTCCC 28156342 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || |||||||| |||| ||| |||||||| |||||||| Sbjct 28156341 ACCTCCAATGTAATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || |||||||||||||| | ||| || ||||||| | || Sbjct 24867180 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCGTCCTCGAGCTGC 24867239 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || |||||||| |||||| || | ||| || ||||| || || Sbjct 24867240 TTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTG 24867299 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| || || || | |||||| || || || | Sbjct 24867300 GC--CTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTGATCGTCTTCCCCG 24867357 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || || |||||||| || Sbjct 24867358 TTAGGGTTTTCACGAAGATCTGCATCTT 24867385 >seq6 Length=39822476 Score = 102 bits (112), Expect = 7e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| ||||| |||||||| || |||||||||||||| | ||| | |||| Sbjct 23704398 AGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCT 23704339 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| ||||| || || | || || ||||| |||||| ||| | ||| || ||||| Sbjct 23704338 TCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 23704279 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | |||||| || ||| || | |||||||| Sbjct 23704278 TGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGG 23704221 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || ||||| || || |||||||| || Sbjct 23704220 TCTTCCCCGTTAGGGTTTTAACGAAGATCTGCATCTT 23704184 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 16727 ACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCC 16786 |||| || || || ||||| || || ||||||||||| |||| ||| | ||||| Sbjct 26071105 ACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTCG 26071046 Query 16787 AATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCA 16846 | ||| ||||| || | || || ||||| |||||| ||| | |||||||| || | Sbjct 26071045 AGTTGCTTGCCTGCGAAGATCAGACGCTGCTGGTCCGGAGGAATACCCTCTTTATCCTGA 26070986 Query 16847 ATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTT 16906 || | |||||| | | | | ||| || |||| |||| ||||| || || Sbjct 26070985 ATCTTGGCCTTCACGTTGTCAATAGTATCTGAACTCTCCACCTCCAAAGTGATTGTCTTC 26070926 Query 16907 CCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || || |||||||||||||| Sbjct 26070925 CCGGTCAATGTCTTAACAAAAATCTGCAT 26070897 >seq1 Length=43764888 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||| || || | ||| | ||| Sbjct 35467678 AGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCTAAGGTGCGACCATCC 35467619 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | || || ||||| |||||| ||| | ||| || ||||| Sbjct 35467618 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCT 35467559 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | |||||| | |||| |||| ||||||| Sbjct 35467558 TGGATCTTGGC--CTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGG 35467501 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||| || || |||||||||||||| Sbjct 35467500 TCTTGCCGGTCAAGGTCTTCACAAAAATCTGCAT 35467467 >seq9 Length=54679868 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| ||| || || ||||| || || ||||||||||| ||| Sbjct 23042206 CCACCACGGAGACGCAACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCC 23042265 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || ||||| || | || || ||||| ||||| || Sbjct 23042266 AAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 23042325 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | | |||||| | ||| | Sbjct 23042326 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACT 23042385 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || |||||||| || || || ||||| |||||||| Sbjct 23042386 TCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 23042432 >seq7 Length=48366697 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| |||| || |||| || ||||| |||||||| || ||||||||||| || Sbjct 20455720 CCTCCTCTCAGCCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 20455779 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| |||| || || || ||| | || || ||||| |||||| || Sbjct 20455780 AGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGG 20455839 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | |||||| | | | | |||||| | || Sbjct 20455840 ATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCAACC 20455899 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | || || || || || || || ||||| ||||| ||||||||||| Sbjct 20455900 TCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 20455949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404925641489140