Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 138 9e-28 seq9 136 3e-27 seq5 131 1e-25 seq1 125 6e-24 seq6 114 1e-20 seq4 109 5e-19 >seq3 Length=64984695 Score = 138 bits (152), Expect = 9e-28 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| ||||| || || ||||| || ||| |||| ||||| ||||| | | | Sbjct 34860926 GATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTC 34860867 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| || |||| || |||||||||||||| || || || || ||||| Sbjct 34860866 AGACACCATTGACAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCTCCGGATCA 34860807 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || ||||| || || ||| | |||||| |||||| | |||||||||| Sbjct 34860806 GCAGCGTCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCCGATTACAA 34860747 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || || ||| Sbjct 34860746 CATCCAGAAGGAGTCTACC 34860728 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || || ||||| || || |||| ||||| ||||| | | || Sbjct 11141331 ATGCAGATTTTCGTTAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGAGCTCC 11141272 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || ||||||||||| |||||||| || || || Sbjct 11141271 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAG 11141212 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | |||||| |||||| | | || |||||| Sbjct 11141211 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAAC 11141152 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || || |||||| | || || || | || | || |||||||| Sbjct 11141151 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTCCGTCTCCGTGGAGGTTT 11141102 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || |||||||| || || ||| ||||||| || ||||| | || Sbjct 11141559 ATGCAAATCTTCGTGAAGACTTTAACAGGAAAGACGATCACTCTAGAGGTGGAGAGTTCC 11141500 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| ||||| || ||||| ||||||||||| || || || Sbjct 11141499 GACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 11141440 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||||||| | |||||| || || | | || || ||| Sbjct 11141439 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCTGACTATAAC 11141380 Query 22399 ATTCAAAAAGAATCCAC 22415 || || |||||||| || Sbjct 11141379 ATCCAGAAAGAATCAAC 11141363 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || ||| | ||||| || || || | || Sbjct 59730414 ATGCAGATCTTTGTCAAGACACTGACGGGAAAGACGATTACTCTAGAGGTCGAGAGTTCC 59730473 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||| || || || || || || Sbjct 59730474 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 59730533 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || ||| | |||||| |||||| | |||| |||||| Sbjct 59730534 CAGCGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAAC 59730593 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || ||||| ||||| |||| |||||| Sbjct 59730594 ATCCAGAAGGAGTCTACTCTCCACTTAGTGTTGCGTCTGCGTGGAGGT 59730641 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || || || || || ||| | ||| | || ||||| | | | Sbjct 34861381 ATGCAAATTTTTGTCAAGACCTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCA 34861322 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | ||| || || |||||||||||||| || ||||| || || Sbjct 34861321 GACACTATTGACAACGTGAAAGCCAAGATCCAAGACAAGGAGGGGATCCCACCGGACCAG 34861262 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||||| |||||| | || | | || |||||| Sbjct 34861261 CAGAGGTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGGACTCTAGCTGACTACAAC 34861202 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || |||||||| || | || | || || || | || |||||| Sbjct 34861201 ATCCAGAAAGAATCTACGCTTCACCTGGTCTTACGTCTACGTGGAGGT 34861154 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || |||||||| || || |||| || || ||||| | | Sbjct 59730642 ATGCAGATCTTTGTCAAGACCTTAACCGGAAAGACCATCACACTGGAGGTGGAGAGTTCG 59730701 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || ||||||||||| || || || || || || Sbjct 59730702 GACACCATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 59730761 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||| |||||| Sbjct 59730762 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAAC 59730821 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 ||||| || || || || | || || || ||||| | || || || ||| Sbjct 59730822 ATTCAGAAGGAGTCTACTCTCCACTTGGTGTTGCGTCTCCGTGGTGGCTTT 59730872 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| ||||| | || ||||| | | | Sbjct 11141787 ATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACGATCACTTTGGAGGTGGAGAGCTCT 11141728 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || |||||||| || ||||| || || Sbjct 11141727 GACACCATCGATAACGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 11141668 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||||| |||||| | | ||| | |||| |||||| Sbjct 11141667 CAGAGGTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGCAGGACCTTGGCCGACTACAAC 11141608 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| ||||| || ||| | || | || ||||| | || ||||| Sbjct 11141607 ATTCAGAAAGAGTCGACCCTTCACCTGGTCTTGCGTCTACGTGGAGG 11141561 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| || || ||||| | | || Sbjct 16418965 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACCATCACACTGGAGGTGGAGAGCTCC 16418906 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || |||||||| || || || || || || || Sbjct 16418905 GACACTATTGATAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCTCCGGACCAG 16418846 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| | | || |||||| Sbjct 16418845 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTAGCAGACTACAAC 16418786 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || || ||| | || || || Sbjct 16418785 ATTCAAAAGGAGTCGACCCTTCACTTGGT 16418757 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || || ||||| | || || || | | || Sbjct 16419193 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACCATCACTTTGGAGGTTGAGAGCTCC 16419134 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | ||||| || || ||||||||||| || ||||| || || || Sbjct 16419133 GACACCATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAG 16419074 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| | || || || ||| | | || |||||| Sbjct 16419073 CAGAGATTGATCTTTGCCGGAAAGCAGCTTGAAGACGGTCGTACCTTAGCTGACTACAAC 16419014 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || || || |||| |||| || || Sbjct 16419013 ATCCAGAAGGAGTCTACGCTTCACTTGGTGCTGCGTCTGCGTGGTGG 16418967 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || ||||| | || ||||| | | | Sbjct 34861609 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACTATCACTTTGGAGGTGGAGAGCTCT 34861550 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || || || |||||||| || ||||| || || Sbjct 34861549 GACACTATTGATAATGTCAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 34861490 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||||| |||||| | || | | || |||||| Sbjct 34861489 CAGAGGTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGGACTCTTGCTGACTACAAC 34861430 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || |||||||| ||| | ||| Sbjct 34861429 ATCCAGAAAGAATCTACCCTCCAT 34861406 >seq9 Length=54679868 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| ||| | ||||| || || |||| || || ||||| | | || Sbjct 23042660 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACACTCGAGGTGGAGAGCTCC 23042601 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| || || |||||||||||||||||||| ||||| || Sbjct 23042600 GACACCATCGACAACGTGAAAGCTAAGATCCAAGACAAGGAGGGTATTCCTCCCGACCAG 23042541 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || |||||||| ||| | |||||| || ||| | | || |||||| Sbjct 23042540 CAGCGTTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAC 23042481 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| ||||| || ||| | || || || ||||| Sbjct 23042480 ATTCAGAAAGAGTCGACCCTTCACTTGGTGTTGCG 23042446 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || ||| |||| || ||||| || | | || Sbjct 23042432 ATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACGATCACCCTCGAAGTTGAGAGCTCC 23042373 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| || ||||| || || Sbjct 23042372 GACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCAGACCAG 23042313 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| || ||| | | || |||||| Sbjct 23042312 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAC 23042253 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 ||||| ||||| || || | ||||| || ||||| | || || || ||| Sbjct 23042252 ATTCAGAAAGAGTCGACTCTTCATTTGGTGTTGCGTCTCCGTGGTGGCTTT 23042202 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || || ||| | ||||| || || |||| ||||| ||||||| | Sbjct 23042890 AGATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCT 23042831 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| | |||| || || || ||||||||||| || ||||| |||| Sbjct 23042830 CGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGATC 23042771 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||| | ||||| || ||||| || || | |||||| || || || | ||||||| Sbjct 23042770 AGCAAAGGCTTATCTTCGCCGGGAAGCAACTCGAGGATGGACGTACTCTCGCTGATTACA 23042711 Query 22397 ACATTCAAAAAGAATCCACCATACAT 22422 |||| || || || || ||| | ||| Sbjct 23042710 ACATCCAGAAGGAGTCGACCCTTCAT 23042685 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||||||||| || |||||| | ||||| || || | ||||| || || || | | Sbjct 53991045 AGATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATTACTCTCGAGGTCGAGAGCT 53991104 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| | |||| || || || |||||||| || ||||| || || | Sbjct 53991105 CTGACACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACC 53991164 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | || || || ||||| || ||| | || ||| | || || | || |||| Sbjct 53991165 AGCAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACTCTCGCTGACTACA 53991224 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || || || || | ||| | ||| | | ||| | || ||| Sbjct 53991225 ACATCCAGAAGGAGTCAACTCTCCATCTGGTTCTCAGGTTGAGAGGTGGT 53991274 >seq5 Length=46902585 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || ||||| || |||||| |||| || || ||||| | | || Sbjct 33724869 ATGCAGATCTTTGTCAAGACCTTAACGGGAAAAACGATCACACTCGAGGTGGAGAGCTCC 33724928 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || |||||||||||||| || || || || || Sbjct 33724929 GACACCATCGATAACGTCAAGGCCAAGATACAAGACAAGGAGGGAATCCCGCCTGACCAG 33724988 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||||||||| ||| | |||||| || || | ||||||||||| Sbjct 33724989 CAGCGTTTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACATTGGCCGATTACAAC 33725048 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || | ||| | || || || |||| ||||| Sbjct 33725049 ATTCAGAAGGAGTCTACTCTTCATCTCGTGTTACGTCTGCGTGGAGG 33725095 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| || || ||||| || | || || || ||| |||| ||||| ||||||| Sbjct 33724636 TACAGATGCAGATCTTCGTTAAGACACTCACGGGAAAGACGATCACCCTTGAGGTGGAAA 33724695 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | || || | ||| || | ||| || ||||||||||||||||||||||| || | Sbjct 33724696 GCTCTGACACGATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGTATTCCTCCGG 33724755 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 |||| || | ||||| || ||||| || ||| | ||||| | ||| | | |||| Sbjct 33724756 ATCAGCAGAGGCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGGAGAACCCTAGCTGATT 33724815 Query 22394 ACAACATTCAAAAAGAATCCACCATACAT 22422 ||||||| || || || || || ||||| Sbjct 33724816 ACAACATCCAGAAGGAGTCGACTCTACAT 33724844 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || ||||| || |||| || || || || | | || Sbjct 33725097 ATGCAAATCTTTGTCAAGACGTTGACTGGTAAGACCATCACACTGGAGGTCGAGAGCTCC 33725156 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || ||||||||||| || || || || || || Sbjct 33725157 GACACGATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 33725216 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||| |||||| Sbjct 33725217 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTAGCCGACTACAAC 33725276 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || || || || || ||| | || || || ||||| | || || || ||| Sbjct 33725277 ATCCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGCTTT 33725327 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| ||||| |||| || || ||| | || | || || ||| | Sbjct 12956220 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCTTAGAGGTCGAATCA 12956279 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | ||| || | || || || || |||||||| || || ||||| ||| Sbjct 12956280 TCCGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGAT 12956339 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || ||||| || ||| | || || | || || |||||||| Sbjct 12956340 CAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACACTCGCCGATTAC 12956399 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || || || || Sbjct 12956400 AACATCCAGAAGGAGTCGAC 12956419 >seq1 Length=43764888 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || ||| |||| || || ||||| | || Sbjct 35467011 ATGCAAATCTTCGTCAAGACTTTGACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTCC 35467070 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | ||| ||||| || ||||||||||||||||| ||||| || Sbjct 35467071 GACACCATTGACAATGTGAAAGCCAAAATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 35467130 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| || || || || || ||| | | ||| | ||||||||||| Sbjct 35467131 CAGAGGCTTATCTTTGCTGGAAAGCAATTGGAAGATGGCAGGACCTTGGCCGATTACAAC 35467190 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 35467191 ATTCAGAAGGAGTCTAC 35467207 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || || || || || ||| ||||| | || || |||| | || Sbjct 35466783 ATGCAAATATTCGTTAAGACGTTGACGGGAAAGACGATCACTTTGGAGGTTGAAAGCTCC 35466842 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || ||||| || || |||||||| |||||||| ||||| || || Sbjct 35466843 GACACTATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 35466902 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || ||| | |||||| |||||| | | ||||||||| Sbjct 35466903 CAGAGGTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGATTACAAC 35466962 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| || | || || || |||| | || ||||| Sbjct 35466963 ATCCAGAAGGAATCTACTCTTCACTTGGTCCTGCGTCTACGTGGAGG 35467009 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || || ||||| || || |||| || || ||||| | | || Sbjct 35467467 ATGCAGATTTTTGTGAAGACCTTGACCGGCAAGACCATCACACTGGAGGTGGAGAGCTCC 35467526 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||| || || || || || || Sbjct 35467527 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAG 35467586 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | | ||||||||| Sbjct 35467587 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTAGCAGATTACAAC 35467646 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || |||||| | || || || Sbjct 35467647 ATTCAGAAGGAGTCCACCCTTCACTTGGT 35467675 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| |||||| | ||||| || || |||| || || ||||||| | Sbjct 35466553 AGATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCT 35466612 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | |||||| | ||| | | || || || || || |||||||| || ||||| || | Sbjct 35466613 CTGATACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACC 35466672 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | || || ||||||||||| ||||| |||||| | || | | || |||| Sbjct 35466673 AGCAGAGGCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTTGCGGACTACA 35466732 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| || || || || || Sbjct 35466733 ACATCCAGAAGGAGTCGAC 35466751 >seq6 Length=39822476 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||| || || ||||| || || ||||| | || ||||| | | Sbjct 26070897 ATGCAGATTTTTGTTAAGACATTGACCGGGAAGACAATCACTTTGGAGGTGGAGAGTTCA 26070956 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | | || || ||||| || || ||||||||||| || || || Sbjct 26070957 GATACTATTGACAACGTGAAGGCCAAGATTCAGGATAAAGAGGGTATTCCTCCGGACCAG 26071016 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| || | |||||| |||||| | | || |||||| Sbjct 26071017 CAGCGTCTGATCTTCGCAGGCAAGCAACTCGAGGATGGTCGCACCTTGGCTGACTACAAC 26071076 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || || ||||| || ||| | || || || || || | || || |||||| Sbjct 26071077 ATCCAGAAAGAGTCGACCCTTCACTTGGTGTTACGTCTCCGTGGTGGTTTT 26071127 >seq4 Length=53719093 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22206 TACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGA 22265 ||| | ||| ||||||||||||| || |||||| ||||||| || || | ||||| || Sbjct 7247884 TACTTGTGTGCAGATGCAAATTTTCGTGAAAACTCTAACCGGCAAGACCATTACTCTCGA 7247825 Query 22266 AGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTAT 22325 || || | | |||| || | ||| | |||| || || || |||||||| || || Sbjct 7247824 GGTCGAGAGCTCCGACACTATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCAT 7247765 Query 22326 TCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGT 22385 ||| || || || || | || || || ||||| || ||| | |||||| ||||| | Sbjct 7247764 TCCTCCGGACCAGCAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAGGATGGGCGCACGCT 7247705 Query 22386 CTCCGATTACAACATTCAAAAAGAATCCAC 22415 | | || ||||| ||||| ||||| || || Sbjct 7247704 CGCTGACTACAATATTCAGAAAGAGTCTAC 7247675 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| |||| || || ||| |||| || || || ||| | Sbjct 24867386 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAATC 24867327 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | |||| ||| | ||| | |||| || || ||||||||||| || || || || || Sbjct 24867326 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGA 24867267 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || || || || ||||| || ||| | ||||| | | ||| || |||| || Sbjct 24867266 CCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGCAGGACCCTCGCCGACTA 24867207 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| || || || || || Sbjct 24867206 CAACATCCAGAAGGAGTCGAC 24867186 Score = 105 bits (116), Expect = 6e-18 Identities = 161/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA-ACCAC 22277 ||||| || ||||| || || || || || ||||| | || | || |||| | | | | Sbjct 28156292 ATGCAGATCTTTGTCAAGACGTTGACTGGAAAAACTATTACATTGGAGGTGGGAGAGCTC 28156351 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | ||| | ||||| ||| || |||||||||||||||||||| || || || Sbjct 28156352 CGATACTATTGACAACGTCAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 28156411 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || || |||||||| ||| | || || | | || | | || ||||| Sbjct 28156412 GCAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCAGAACATTGGCGGACTACAA 28156471 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||||| || || || | || || || ||||| |||| ||||| Sbjct 28156472 CATTCAAAAGGAGTCTACACTTCACTTGGTGTTGCGTCTGCGTGGAGG 28156519 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | ||||| ||||| | ||| | || || |||| | | Sbjct 7247643 ATGCAGATTTTTGTCAAGACCCTCACCGGCAAAACCATTACTTTGGAGGTTGAAAGCTCA 7247584 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || |||||||| || || ||||| || || Sbjct 7247583 GACACAATAGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGGATCCCACCAGACCAG 7247524 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || || |||||| | |||||| ||||| | | ||||||||| Sbjct 7247523 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACTCTTGCGGATTACAAC 7247464 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || || || Sbjct 7247463 ATCCAAAAGGAGTCTAC 7247447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419559773804590