Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 152 1e-31 seq3 152 1e-31 seq8 143 6e-29 seq4 143 6e-29 seq9 141 2e-28 seq5 127 5e-24 seq1 127 5e-24 seq7 122 2e-22 >seq6 Length=39822476 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| ||| || || ||||| || ||||||||| Sbjct 23704413 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 23704354 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||||| || ||||||||||| ||||| || ||| Sbjct 23704353 AGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 23704294 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | ||| || || || Sbjct 23704293 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 23704234 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 23704233 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTAACGAAGATCTGCAT 23704187 Score = 122 bits (134), Expect = 2e-22 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| || | ||||| || || || | ||| || ||||||||| Sbjct 26071087 TCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTCGAGTTGCTTGCCTGCGAAG 26071028 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || || || || ||||||||||| || || || |||||||| Sbjct 26071027 ATCAGACGCTGCTGGTCCGGAGGAATACCCTCTTTATCCTGAATCTTGGCCTTCACGTTG 26070968 Query 288403 TCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 || |||| ||| | | ||| || || | ||||| ||||||||||||| ||||| | Sbjct 26070967 TCAATAGTATC--TGAACTCTCCACCTCCAAAGTGATTGTCTTCCCGGTCAATGTCTTAA 26070910 Query 288461 CGAATATCTGCAT 288473 | || |||||||| Sbjct 26070909 CAAAAATCTGCAT 26070897 >seq3 Length=64984695 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | || || || ||||| || ||||||||| Sbjct 15816646 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 15816587 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||||||||| || | || ||||| ||||||||||| ||||| || ||| Sbjct 15816586 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 15816527 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || || || || || | ||| ||||| ||| Sbjct 15816526 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACT 15816467 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 15816466 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 15816420 Score = 136 bits (150), Expect = 9e-27 Identities = 154/204 (75%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| ||||| || ||||| || || || || ||||| |||||| Sbjct 59730376 TCCTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCATCCTCCAACTGCTTTCCGGCGAAG 59730317 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| ||||| ||||| ||||||||||| || ||||| ||||| Sbjct 59730316 ATCAACCTCTGCTGATCGGGGGGGATGCCTTCCTTATCCTGGATCTTGGCTTTGACGTTG 59730257 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| ||||| ||||| ||||| |||||||| Sbjct 59730256 TCGATGGTGTCCGAGCTC---TCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTA 59730200 Query 288460 ACGAATATCTGCATTATGTTATTC 288483 ||||| ||||||| | ||| |||| Sbjct 59730199 ACGAAGATCTGCA-TCTGTAATTC 59730177 Score = 129 bits (142), Expect = 1e-24 Identities = 171/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || |||||||| | || |||||| ||||| || |||| Sbjct 34861379 CATG-CCACCACGGAGCCTGAGGACGAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGT 34861437 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | ||| || || || || || || || ||||||| | ||| || Sbjct 34861438 CAGCAAGAGTCCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCG 34861497 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||||||| || ||||||||||| || || || || || || |||| || |||| Sbjct 34861498 GTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTC- 34861556 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 34861557 --TCCACCTCCAAAGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 34861609 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | |||| || |||||| ||||| |||||||| || Sbjct 11141333 CCACCACGGAGCCTGAGCACCAAGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCC 11141392 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | ||||| || |||||||| |||||||| || || Sbjct 11141393 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 11141452 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || ||||| ||||||||||| ||||||||||| || || | ||| ||| || Sbjct 11141453 ATACCCTCTTTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTC---TCC 11141509 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || | |||||| ||||| || ||||| Sbjct 11141510 ACCTCTAGAGTGATCGTCTTTCCTGTTAAAGTCTTCACGAAGATTTGCAT 11141559 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || || || | || | |||||||| || || ||||| |||||| Sbjct 34861647 TCCTTCTGGATATTGTAATCAGCCAAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAG 34861706 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| ||| ||||||||| || ||||||||||| || ||||| ||||| Sbjct 34861707 ATGAGCCTCTGCTGATCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCTTTAACGTTG 34861766 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | ||||| ||||| ||||||| |||||| Sbjct 34861767 TCGATGGTGTCAGAGCTC---TCCACCTCCAAAGTGATAGTCTTTCCGGTCAACGTCTTG 34861823 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 34861824 ACGAAAATCTGCAT 34861837 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || | |||| ||| || || ||||| || ||||| || Sbjct 11141789 CCACCACGAAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCC 11141848 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | |||||||| || || ||||| || ||||| || | ||| ||| || Sbjct 11141849 AAGGTTCTCCCGTCTTCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 11141908 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || |||||||| || ||||| ||||| || || | || ||| ||| Sbjct 11141909 ATGCCTTCCTTGTCCTGGATCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCT---TTCC 11141965 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||||||||| ||||| || ||||| |||||||| Sbjct 11141966 ACCTCGAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| || || || ||||| || || ||||| Sbjct 34860699 CCACCACGGAGACGAAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCC 34860758 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || ||||| || ||||| |||||||| ||| ||| Sbjct 34860759 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGG 34860818 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || || || || || || || || || || || | || |||| || Sbjct 34860819 ATGCCTTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTC---TCC 34860875 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| ||||||| ||||| ||||| |||||||| Sbjct 34860876 ACCTCAAGCGTGATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 34860925 Score = 105 bits (116), Expect = 2e-17 Identities = 143/197 (73%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || | || || || || || | ||||| || |||||| Sbjct 34860963 TCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCGAGCTGTTTGCCAGCGAAG 34861022 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || |||||||| || ||||| ||| ||||| || || ||||| || || |||||| Sbjct 34861023 ATGAGACGCTGCTGG---TCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 34861079 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || |||| || ||| || || || | ||||| ||||| ||||| || ||| Sbjct 34861080 TTATCAATAGTGTCCGAACTC---TCAACCTCCAATGTGATGGTCTTGCCGGTAAGGGTC 34861136 Query 288457 TTGACGAATATCTGCAT 288473 ||||| ||||||||||| Sbjct 34861137 TTGACAAATATCTGCAT 34861153 Score = 105 bits (116), Expect = 2e-17 Identities = 155/217 (71%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 288260 TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGT 288319 |||| || || |||| ||| |||||| ||||| || ||||| || || || | ||| | Sbjct 34861169 TAAG-ACCAGGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCTAGAGTCCTTCCAT 34861227 Query 288320 CTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTAT 288379 | || || || || || || ||||||| | ||| || |||||| || || || | Sbjct 34861228 CCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGT 34861287 Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGA 288436 | ||||| || ||||||||||| || |||| || |||| || || || | || | Sbjct 34861288 CTTGGATCTTGGCTTTCACGTTGTCAATAGTGTCTGAGCTC---TCCACCTCCAAAGTAA 34861344 Query 288437 TCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||||| |||| |||||||| || || ||||| Sbjct 34861345 TCGTCTTCCCCGTCAAGGTCTTGACAAAAATTTGCAT 34861381 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || |||||||| | || | || || || || || || || || ||| Sbjct 11141597 TCTTTCTGAATGTTGTAGTCGGCCAAGGTCCTGCCATCCTCCAACTGCTTGCCGGCAAAG 11141656 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || ||||||||| || ||||||||||| || || || ||||| Sbjct 11141657 ATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTA 11141716 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | ||||||||||| ||||| || |||||| Sbjct 11141717 TCGATGGTGTCAGAGCTC---TCCACCTCCAAAGTGATCGTCTTTCCGGTAAGGGTCTTG 11141773 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 11141774 ACGAAGATCTGCAT 11141787 >seq8 Length=41758685 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || |||||||||| ||| || || ||||| || ||||||||| Sbjct 33346263 CCCCCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 33346204 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||||||||||||||| | || || || ||||| ||||| ||||| || ||| Sbjct 33346203 AGCGTGCGTCCGTCTTCGAGCTGCTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGG 33346144 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || || || || || | ||| || || || Sbjct 33346143 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 33346084 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| || || || || ||||| |||||||| Sbjct 33346083 TCGAGGGTGATTGTTTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 33346037 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| ||||| || ||||| || || || || || ||||| | |||||||| ||||||| Sbjct 28102507 CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGA 28102448 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 ||| ||||| ||| ||||| |||||||| || ||||| || || || || || | Sbjct 28102447 TCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 28102388 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | || | ||| || || || ||||| ||||| |||||||||||||| || || |||| Sbjct 28102387 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCACGA 28102328 Query 288464 ATATCTGCAT 288473 | |||||||| Sbjct 28102327 AGATCTGCAT 28102318 >seq4 Length=53719093 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| |||| ||| || || ||||| || ||||||||| Sbjct 24867156 CCACCGCGGAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 24867215 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || ||||||||||| ||||| || ||| Sbjct 24867216 AGGGTCCTGCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGG 24867275 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || ||||| || || | ||| ||||| || Sbjct 24867276 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACC 24867335 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||||||||| || || || || ||||| |||||||| Sbjct 24867336 TCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 24867382 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| ||||| || | ||| ||||| || ||||| ||||| ||| Sbjct 7247645 CCACCGCGGAGACGAAGCACGAGGTGGAGCGTAGACTCTTTCTGAATATTGTAGTCAGCG 7247704 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || |||||||| || | ||| || || Sbjct 7247705 AGCGTGCGCCCATCCTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 7247764 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || |||||||| || || || ||||| || |||| || |||| || Sbjct 7247765 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATAGTGTCGGAGCTC---TCG 7247821 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| ||||| ||||| || ||||| || ||||| Sbjct 7247822 ACCTCGAGAGTAATGGTCTTGCCGGTTAGAGTTTTCACGAAAATTTGCAT 7247871 >seq9 Length=54679868 Score = 141 bits (156), Expect = 2e-28 Identities = 177/240 (74%), Gaps = 7/240 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| || || |||||||||| || || || ||||| || || || ||| Sbjct 23042662 CCACCGCGGAGCCTGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCG 23042721 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| || || | ||| || || |||||||| || | || ||| |||| Sbjct 23042722 AGAGTACGTCCATCCTCGAGTTGCTTCCCGGCGAAGATAAGCCTTTGCTGATCCGGTGGG 23042781 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || || |||||||| || || || ||||| || || | || ||| ||| Sbjct 23042782 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCT---TTCC 23042838 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483 || || || ||||| ||||| ||||| |||||||| ||||| ||||||| | |||||||| Sbjct 23042839 ACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCA-TCTGTTATTC 23042897 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | || | ||||| || ||||| || || || ||||| || Sbjct 23042206 CCACCACGGAGACGCAACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCC 23042265 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | || || || |||||||| |||||||| || |||| Sbjct 23042266 AAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 23042325 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 ||||| || || ||||| || || || || ||||| || || | ||| ||| || Sbjct 23042326 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTC---TCA 23042382 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||||||||| ||||| |||||||| || || |||||||| Sbjct 23042383 ACTTCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 23042432 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || ||||| || | || || || || || | || || || |||||| Sbjct 23042470 TCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAAG 23042529 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| |||||| || || || || || || || ||||| || ||||||||||| Sbjct 23042530 ATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCTTGGATCTTAGCTTTCACGTTG 23042589 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| ||||| ||||| ||||| |||||||| Sbjct 23042590 TCGATGGTGTCGGAGCTC---TCCACCTCGAGTGTGATAGTCTTTCCGGTGAGAGTCTTA 23042646 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 23042647 ACGAAGATCTGCAT 23042660 >seq5 Length=46902585 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || || |||| ||| || || ||||| || || |||||||| || | ||||||| Sbjct 12956434 AGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGTGTCCTTCCGTCT 12956375 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||||||||| ||||| ||| |||||| ||||| || ||| Sbjct 12956374 TCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGGGATCCCTTCCTTGTCC 12956315 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || ||||| || || || | ||| ||||| || || | || |||||| Sbjct 12956314 TGGATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGACCTCTAAGGTTATCGTC 12956255 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || || || || || || ||||||||| Sbjct 12956254 TTCCCCGTTAGGGTTTTCACAAAGATCTGCATT 12956222 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || || || |||||||| | || || || ||||| || || | Sbjct 33724871 CATG-CCACCACGTAGCCTGAGGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAAT 33724813 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | ||||| || | || ||||| |||||||| || | ||| ||| Sbjct 33724812 CAGCTAGGGTTCTCCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCG 33724753 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 || || || || || || || || || ||||| || || || || | || ||| Sbjct 33724752 GAGGAATACCCTCCTTGTCTTGAATCTTGGCTTTAACATTGTCGATCGTGTCAGAGCT-- 33724695 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||||||||| || || || ||||| ||||| |||||||| Sbjct 33724694 -TTCCACCTCAAGGGTGATCGTCTTTCCCGTGAGTGTCTTAACGAAGATCTGCAT 33724641 >seq1 Length=43764888 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || |||||||||| || || || ||||| || ||||| || Sbjct 35466781 CCACCACGGAGCCTGAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCA 35466722 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || || || || || || ||||| || | ||| || |||| Sbjct 35466721 AGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 35466662 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || ||||||||||| || || || ||||| || || | ||| ||| ||| Sbjct 35466661 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTATCAGAGCT---TTCC 35466605 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| ||||| || || || |||||||| Sbjct 35466604 ACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 35466555 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || || | |||| ||| || || || || || || | Sbjct 35467241 CATG-CCACCACGGAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAAT 35467183 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | || | || ||||| ||||| ||||| || ||||| || | ||| || Sbjct 35467182 CGGCCAAGGTCCTGCCATCTTCCAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGG 35467123 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 || || || || || ||||||||||| |||||||| || || || | ||| ||| Sbjct 35467122 GAGGAATACCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTC- 35467064 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| || |||| |||||||||||| || ||||| Sbjct 35467063 --TCCACCTCTAGCGTGATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 35467011 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || || || || | ||||| || || || | || ||||| || || Sbjct 35466974 TTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAA 35466915 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| || |||||| || ||||| || ||||| || ||||| || || Sbjct 35466914 GATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTGACATT 35466855 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||| || || | ||||||||||| || |||| ||||| || Sbjct 35466854 GTCAATAGTGTCGGAGCTTTCAACCTCCAAAGTGATCGTCTTTCCCGTCAACGTCTTAAC 35466795 Query 288462 GAATATCTGCAT 288473 |||||| ||||| Sbjct 35466794 GAATATTTGCAT 35466783 >seq7 Length=48366697 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| |||||||| | |||||||| | || || || || ||| Sbjct 20455756 TCCTTCTGGATGTTGTAGTCCGCGAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAG 20455815 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || |||||| ||||| || ||||| || || || ||||| || Sbjct 20455816 ATCAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTG 20455875 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||||| || || || || ||||||||||| || || || || || Sbjct 20455876 TCGATCGTGTCGGATGATTCAACCTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACA 20455935 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 20455936 AAGATCTGCATT 20455947 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/169 (72%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 268486 TGGAACATGTACAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAGTT--CCTCTTA 268543 ||| | |||||||||||||| | || | || |||||| |||| ||||| ||||| Sbjct 33024485 TGGGAGATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAAGAAGTCGACCTCTC- 33024427 Query 268544 ACGCAGACGTTGCAGACTGGCGTGAGAAACTGAACAACGATGAACGACACTTCATCAAAC 268603 | |||| | |||||| ||||| || ||| ||| || |||||||||||||||| Sbjct 33024426 -CCAAGACAATCGCGACTGG---GAGAATCTCAACGACGGAGAGCGACACTTCATCAAAC 33024371 Query 268604 ATATTCTGGGGTTCTTTGCAGGCTCCGACGGTATCGTGATGGAAAATCT 268652 | | || | ||||| || | ||| ||||| ||||| |||| ||||| Sbjct 33024370 ACGTCCTCGCCTTCTTCGCCGCCTCAGACGGAATCGTTTTGGAGAATCT 33024322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179157350406708