Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9 158 1e-33 seq4 143 3e-29 seq3 140 3e-28 seq1 134 1e-26 seq8 129 6e-25 seq5 129 6e-25 seq6 114 1e-20 seq442 86.0 6e-12 seq2 84.2 2e-11 >seq9 Length=54679868 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||||||| | || |||||||| ||||| ||||| || || Sbjct 23042206 CCACCACGGAGACGCAACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCC 23042265 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || |||||| |||| | |||||||| || || || Sbjct 23042266 AAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 23042325 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||||| |||| || | |||||| | ||||| || Sbjct 23042326 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTG-TCAATGGTGTCGGAGCTCTCAAC 23042384 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||| ||| | ||| || ||||| ||||| || ||||| ||||||||| Sbjct 23042385 TTCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATG 23042433 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || |||||||| ||||| ||||| || || Sbjct 23042434 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCC 23042493 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || || ||| ||||||| |||||||| |||||||| Sbjct 23042494 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGA 23042553 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| ||| || || | |||| |||| |||||| | ||||| || Sbjct 23042554 ATACCCTCCTTGTCTTGGATCTTAGCTTTCACGTTG-TCGATGGTGTCGGAGCTCTCCAC 23042612 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||| ||||| || || || |||||||| Sbjct 23042613 CTCGAGTGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 23042660 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||||||| | || | |||||||| || || ||||||||||| | Sbjct 53991730 TCCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCCGC 53991671 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||| ||| ||| || |||||||| |||||| |||| | || |||||| || || || Sbjct 53991670 AAGCGTACGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGG 53991611 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| || ||| ||| | | || | ||||| | ||||| || Sbjct 53991610 GATCCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCAGAGCTCTCCAC 53991551 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||||||||| || || || |||||||||||||| Sbjct 53991550 CTCCAAAGTTATTGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 53991503 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | || || ||| || || || || || Sbjct 23042692 GTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTACGTCCATCCTCGAGTTGCTTCCCG 23042751 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | |||||||| || || || |||||||||||| ||| || |||| Sbjct 23042752 GCGAAGATAAGCCTTTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 23042811 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||||| || || || || | ||| | || || ||||| ||||| Sbjct 23042812 ACGTTG-TCGATGGTGTCCGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGT 23042870 Query 127096 TTTTACAAAAATCTGCATGGCTTATT 127121 || || || |||||||| ||||| Sbjct 23042871 CTTCACGAAGATCTGCATCTGTTATT 23042896 >seq4 Length=53719093 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | || | |||||||||||| ||||||||||| || | Sbjct 7247645 CCACCGCGGAGACGAAGCACGAGGTGGAGCGTAGACTCTTTCTGAATATTGTAGTCAGCG 7247704 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || ||| |||| | | |||||| || ||||| Sbjct 7247705 AGCGTGCGCCCATCCTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 7247764 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| ||| || ||||| |||| || | ||||| | |||||||| Sbjct 7247765 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTG-TCAATAGTGTCGGAGCTCTCGAC 7247823 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| |||||||| || ||||| ||||| Sbjct 7247824 CTCGAGAGTAATGGTCTTGCCGGTTAGAGTTTTCACGAAAATTTGCAT 7247871 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||| | ||| | ||||||||| ||||| || |||||||| | Sbjct 7247416 TCCACCACGAAGACGAAGCACAAGATGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGC 7247475 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || |||||||| |||||| |||| | || |||||| || || || Sbjct 7247476 AAGAGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGG 7247535 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| ||| ||||| | || | ||||| | || || || Sbjct 7247536 GATCCCTTCCTTGTCCTGGATCTTCGCCTTGACATTGTCTATTGTGTCTGAGCTTTCAAC 7247595 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||||||||| || || || |||||||||||||| Sbjct 7247596 CTCCAAAGTAATGGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 7247643 Score = 105 bits (116), Expect = 6e-18 Identities = 158/218 (72%), Gaps = 5/218 (2%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | |||||||| |||||||| ||||| || ||| || | Sbjct 28156507 CGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGCCAATGTTCTGCCG 28156448 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| ||||||| | |||||| || ||||| || ||||||||| Sbjct 28156447 TCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTG 28156388 Query 127019 TCCGTGATTTTCTGC-TTGA-GTTGTTCGACGGTGTCCGTACTCT-CGACTTCGACGGTC 127075 || ||| || ||| |||| |||| || | || || | |||| | || || | || Sbjct 28156387 TCTTGGATCTT-TGCTTTGACGTTG-TCAATAGTATCGGAGCTCTCCCACCTCCAATGTA 28156330 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||| || |||| || || ||||| |||||||| Sbjct 28156329 ATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 >seq3 Length=64984695 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||||| || ||||| ||||| ||| | Sbjct 59730868 CCACCACGGAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCA 59730809 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 59730808 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 59730749 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || ||||| | || | |||||||| |||||| || Sbjct 59730748 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCCGAACTCTCCACC 59730689 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| | || || ||||| |||||||| Sbjct 59730688 TCCAGTGTGATGGTCTTTCCGGTTAAGGTCTTGACAAAGATCTGCAT 59730642 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||||||||| || | |||||||| || || || ||||| || | Sbjct 59730412 CCTCCACGTAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 59730353 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | ||| ||||| ||| ||||||| | |||||||||||| || Sbjct 59730352 AGAGTACGTCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCGGGGGGG 59730293 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||| ||| ||| || |||| |||| |||| |||||||| ||||| || Sbjct 59730292 ATGCCTTCCTTATCCTGGATCTTGGCTTTGACGTTG-TCGATGGTGTCCGAGCTCTCCAC 59730234 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || ||||| ||||| || || || |||||||| Sbjct 59730233 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 59730186 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||||||| ||| |||||| ||| || ||||| |||||| Sbjct 34860729 GTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCA 34860788 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | ||||||||||| ||||| ||||| |||||||| || || |||| Sbjct 34860789 GCAAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGAATCTTGGCCTTG 34860848 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||||| || || | || | ||| |||||||||| || Sbjct 34860849 ACATTGTCAATGGTGTCTGAGCTCTCCACCTCAAGCGTGATCGTCTTGCCGGTCAATGTC 34860908 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 34860909 TTAACGAAAATCTGCAT 34860925 Score = 122 bits (134), Expect = 8e-23 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||||| ||||| ||||| || | ||||||||| || || ||||||||||| || Sbjct 34861611 CCTCCGCGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGCC 34861670 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || | ||| ||||| ||| |||| | | ||||||||| || || Sbjct 34861671 AAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGG 34861730 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||| ||| ||| || |||| | |||| |||| |||||| | ||||| | Sbjct 34861731 ATTCCCTCCTTATCCTGGATCTT-GGCTTTAACGTTG-TCGATGGTGTCAGAGCTCTCCA 34861788 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | || | || | || || ||||||| || || || |||||||||||| || Sbjct 34861789 CCTCCAAAGTGATAGTCTTTCCGGTCAACGTCTTGACGAAAATCTGCATGCCT 34861841 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || || || ||||| || ||| |||||| ||| || Sbjct 11141123 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAAGGTGCGACCATCCTCG 11141182 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| ||||| ||| |||| | |||||||| || ||||| || || |||||||| | Sbjct 11141183 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGG 11141242 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | ||||| | | |||||| | ||||| || || | || | || || Sbjct 11141243 ATCTTGGCCTTCACGTTGT-CAATGGTGTCGGAGCTCTCCACCTCAAGTGTGATGGTCTT 11141301 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || || || ||||||||||| Sbjct 11141302 GCCGGTCAAGGTCTTAACGAAAATCTGCAT 11141331 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||| | ||||||||| || || || ||||| ||| ||| || | || || ||||| Sbjct 16419218 ATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTTCTGCCGTCTTCAAGCTG 16419277 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 ||||| ||| | || | | ||||||||||||||| || || ||||||||| ||| | | Sbjct 16419278 CTTTCCGGCGAAAATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCC-TGAATCT 16419336 Query 127030 CTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 |||| | |||| || | |||||| | || || || |||| ||| | || || || Sbjct 16419337 TGGCTTTAACGTTG-TCAATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCC 16419395 Query 127088 GTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || || |||||||| Sbjct 16419396 GTGAGAGTCTTAACGAAGATCTGCAT 16419421 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| || || |||| || | |||||| ||||| || || ||||| || | Sbjct 34861155 CCTCCACGTAGACGTAAGACCAGGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCT 34861214 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | ||| || || || ||||||| | |||||| || || || Sbjct 34861215 AGAGTCCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 34861274 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| ||| || || | |||| || | ||||| | ||||| || Sbjct 34861275 ATCCCCTCCTTGTCTTGGATCTTGGCTTTCACGTTG-TCAATAGTGTCTGAGCTCTCCAC 34861333 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||| || || |||| || || |||||||| |||||| Sbjct 34861334 CTCCAAAGTAATCGTCTTCCCCGTCAAGGTCTTGACAAAAATTTGCATG 34861382 >seq1 Length=43764888 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || ||||| |||||||| | Sbjct 35467693 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCT 35467634 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 35467633 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 35467574 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| |||||||| ||| || ||||| ||||| | | |||||| | ||||| || Sbjct 35467573 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGT-CAATGGTGTCGGAGCTCTCCAC 35467515 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||||| || || |||||||||||||| Sbjct 35467514 CTCCAGTGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAAATCTGCAT 35467467 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | ||||||||| || ||||| ||||||||| ||| || | ||| || Sbjct 35467219 ACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTGCCATCTTCC 35467160 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | || |||||||| |||| | | |||||| |||||||| || |||||||||||| | Sbjct 35467159 AATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGG 35467100 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| || | | || | |||||| | |||||| || || | || | ||| || Sbjct 35467099 ATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTCTTT 35467040 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || |||| ||| || || || || |||||| || Sbjct 35467039 CCTGTCAAAGTCTTGACGAAGATTTGCATGCCT 35467007 >seq8 Length=41758685 Score = 129 bits (142), Expect = 6e-25 Identities = 147/196 (75%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 126918 TAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAG 126977 ||||| |||| || || ||||| || ||| || || ||| || ||||||||||||| Sbjct 28102512 TAGAC-CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAG 28102454 Query 126978 CGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA 127037 || ||||||||||||||||||| ||||| || || || ||||| ||| || ||||| Sbjct 28102453 CGAAGATCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGA 28102394 Query 127038 GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTT 127097 | |||| |||||| | |||||| |||| ||| | || || |||||||| |||| Sbjct 28102393 CATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTT 28102334 Query 127098 TTACAAAAATCTGCAT 127113 | || || |||||||| Sbjct 28102333 TCACGAAGATCTGCAT 28102318 >seq5 Length=46902585 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 || ||||| | ||| | |||||||| || ||||| ||||||||| ||| || ||| | Sbjct 33725083 CGTAACACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCGGCCAATGTACGACCA 33725024 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || ||||||| |||||||| || || || || ||||||||| Sbjct 33725023 TCCTCAAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGCGGGATTCCCTCCTTG 33724964 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || || || ||||| | |||| |||||| | ||||| || |||| || | | Sbjct 33724963 TCTTGTATCTTGGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGATC 33724904 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||| || || | || || ||||| ||||||||| Sbjct 33724903 GTTTTTCCCGTTAAGGTCTTGACAAAGATCTGCATG 33724868 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||||| || || || ||||| ||| | Sbjct 33725323 CCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCT 33725264 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 33725263 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 33725204 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| |||||||| ||| || ||||| | || | ||||| | |||||||| Sbjct 33725203 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCGACC 33725144 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || || || |||| || || ||||| || |||||| || Sbjct 33725143 TCCAGTGTGATGGTCTTACCAGTCAACGTCTTGACAAAGATTTGCATGCCT 33725093 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| || | ||| ||||| || || || ||||||||| | | || | || || Sbjct 12956431 ACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGTGTCCTTCCGTCTTCC 12956372 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || ||| |||||| |||||||||||| || || || || ||||||||| | Sbjct 12956371 AGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGGGATCCCTTCCTTGTCCTGG 12956312 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | |||| ||||| | ||||| || | ||| | ||| || Sbjct 12956311 ATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGACCTCTAAGGTTATCGTCTTC 12956252 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || ||||| ||||| |||||||| Sbjct 12956251 CCCGTTAGGGTTTTCACAAAGATCTGCAT 12956223 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| | | || | ||||| || ||||| || || || |||||||| | Sbjct 33724867 CCACCACGTAGCCTGAGGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT 33724808 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || ||||| ||||| ||| |||| | | ||||||||| ||||| Sbjct 33724807 AGGGTTCTCCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 33724748 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||||| | ||| | | |||| | ||| |||| ||||| | || || | Sbjct 33724747 ATACCCTCCTTGT-CTTGAATCTTGGCTTTAACATTG-TCGATCGTGTCAGAGCTTTCCA 33724690 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | ||| || || || || || || || || |||||||| Sbjct 33724689 CCTCAAGGGTGATCGTCTTTCCCGTGAGTGTCTTAACGAAGATCTGCAT 33724641 >seq6 Length=39822476 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || |||||||| || | || |||||||| || || ||||| || || Sbjct 26071123 CCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCC 26071064 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || || || || ||| |||||| |||||||| || ||||| Sbjct 26071063 AAGGTGCGACCATCCTCGAGTTGCTTGCCTGCGAAGATCAGACGCTGCTGGTCCGGAGGA 26071004 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| || ||| || || ||| | ||||| | | || || | |||||| || Sbjct 26071003 ATACCCTCTTTATCCTGAATCTTGGCCTTCACGTTGT-CAATAGTATCTGAACTCTCCAC 26070945 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || || ||||||| || || ||||||||||||||| || Sbjct 26070944 CTCCAAAGTGATTGTCTTCCCGGTCAATGTCTTAACAAAAATCTGCATGCCT 26070893 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||||||||| || | || ||||| || || || |||||||| || Sbjct 26070895 CCTCCACGTAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 26070836 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || ||||| |||||||| |||||| | |||||| ||||| || Sbjct 26070835 AATGTCCTGCCGTCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 26070776 Query 127007 ATGCCCTCCTTGTCC 127021 || |||||||||||| Sbjct 26070775 ATACCCTCCTTGTCC 26070761 >seq442 Length=16173 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| || || || | || || || || ||||| ||||| ||| ||| ||| || | Sbjct 9900 CGCAGTACTAAGTGAAGGGTCGAGTCCTTCTGAATGTTGTAGTCGGCCAAGGTGTGACCA 9841 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || | ||||| ||||||| ||||||||||| |||||| || || || || || |||||| Sbjct 9840 TCCGCAAGCTGCTTTCCAGAGTAGATCAATCTCTGCTGGTCCGGTGGGATACCTTCCTTG 9781 Query 127019 TCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTC 127053 || ||| || |||| ||||| || | |||||| Sbjct 9780 TCTTGGATCTTGGCCTTGAAGTTG-TCAATGGTGTC 9746 >seq2 Length=52886895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 47061 GAGAGCATGCCCTGCGT-GCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGA 47119 |||| ||| || ||||| ||| |||| |||| | ||||||||||||| || || || Sbjct 45187201 GAGACCATCCCTTGCGTCGCGAAGAA-GGCCCAATGGGCCATGAAGTGGATCGA---CGG 45187146 Query 47120 AAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTC 47179 | ||| | ||||| | | | || ||||| |||||| || |||||||||| Sbjct 45187145 ATCTCAGACTTTCGCCGAGAGGATCGTGGCGTTCGCTTGCGTCGAAGGGATCTTCTTCTC 45187086 Query 47180 GGGCAGCTT-TGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238 || ||||| ||| |||| || | | || | || | ||||| || ||||| | Sbjct 45187085 CGGTAGCTTCTGCT-CGATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCGGGGCTCACCT 45187027 Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT 47293 | ||||||||| |||||| ||||||||||||| ||| | |||| || || || Sbjct 45187026 TCTCCAACGAGCTGATCTCGCGAGACGAAGGCCTTCACTGCGACTTCGCGTGCCT 45186972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475305333508640