Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 118 4e-21 seq4 111 6e-19 seq3 105 3e-17 seq6 102 3e-16 seq7 96.9 1e-14 seq9 93.3 2e-13 >seq1 Length=43764888 Score = 118 bits (130), Expect = 4e-21 Identities = 269/401 (67%), Gaps = 9/401 (2%) Strand=Plus/Minus Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || || || ||||| ||| ||| || || |||| || || || || |||||||| Sbjct 25997272 GTCAACTACAAAGGCGAAGAGAAACAGTTCGCCGCTGAGGAGATCTCTTCCATGGTTCTC 25997213 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGT-TCTCCAGTTACTGATGCAGTAAT 451329 | ||| ||| || | || ||| || ||||| || ||| | | | || || | Sbjct 25997212 ATTAAGATGCGTGAGATCGCTGAAGCTTACCTTGGTGTCACCA-TCAAAAACGCTGTGGT 25997154 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 |||||||||||||| ||||| || | || || ||||| || || || || || || Sbjct 25997153 CACTGTTCCCGCTTACTTCAACGACTCTCAGCGTCAAGCCACAAAGGACGCTGGTGTCAT 25997094 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||||||| ||||| | || || || || || || ||||||||||| | || ||||| Sbjct 25997093 CGCTGGTTTGAATGTCATGCGTATCATCAACGAGCCCACAGCAGCTGCCATTGCCTATGG 25997034 Query 451450 ACTAGGAAAATCAAAAGAAACA-----GAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || | | | || | || | ||| || ||| | || | |||||| ||||| Sbjct 25997033 TCTTG--ACAAGAAGGCGACCAGTGTTGGAGAGAAGAATGTCTTGATTTTTGATCTTGGT 25996976 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| ||| | || | |||||||| || | ||||| || || || Sbjct 25996975 GGTGGTACTTTTGATGTCTCTCTTCTCACCATTGAAGAAGGTATTTTTGAGGTCAAAGCT 25996916 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||| || |||||||| || || |||||| |||| || Sbjct 25996915 ACTGCTGGAGACACTCATCTTGGTGGCGAAGATTTTGACAA 25996875 Score = 91.5 bits (100), Expect = 6e-13 Identities = 136/191 (71%), Gaps = 9/191 (5%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || ||||| ||||| || | || || ||| ||||||||||| Sbjct 11603975 GCTGTCATCACGGTGCCTGCTTACTTCAACGACTCGCAGAGGACAGCTACTAAAGATGCG 11604034 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || | ||||||||||| |||||||||| ||||| ||||| || || || ||| | | Sbjct 11604035 GGTCGCATTGCTGGTTTGGATGTTCTTCGTATTATCAATGAGCCCACTGCTGCTTCCTTG 11604094 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || ||||| | | ||| ||||| ||| |||| | ||| | || |||||| || Sbjct 11604095 GCTTATGGTTTTG--AAAGGAAAAGCAAC----GAAACA---ATTCTTGTCTTTGATCTT 11604145 Query 451502 GGTGGAGGAAC 451512 ||||| || || Sbjct 11604146 GGTGGTGGTAC 11604156 >seq4 Length=53719093 Score = 111 bits (122), Expect = 6e-19 Identities = 533/833 (64%), Gaps = 57/833 (7%) Strand=Plus/Plus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 |||||||| ||||| ||||| || | || || ||||| || || || || || || Sbjct 19018990 ACTGTTCCTGCTTACTTCAACGACTCTCAGCGTCAAGCCACAAAGGACGCTGGTGTCATC 19019049 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||||| ||||| | || || || || || || || |||||||| | || ||||| Sbjct 19019050 GCTGGTTTGAATGTGATGCGTATCATCAACGAGCCCACTGCAGCTGCCATTGCTTATGGT 19019109 Query 451451 CTAGGAAAATCAAAAGAAACA------GAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || ||| || || | | | ||| || || | || | |||||| ||||| Sbjct 19019110 CT-GGACAAG--AAGGCGTCTAGTGTTGGAGAGAAGAACGTCTTGATCTTTGATCTTGGT 19019166 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| || ||| | || | |||||||| || | ||||| || || || Sbjct 19019167 GGTGGTACTTTCAATGTCTCTCTTCTCACCATTGAAGAAGGTATCTTTGAGGTCAAAGCT 19019226 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTG 451624 ||| ||| || |||||||| || || |||||| |||| || || |||||||| Sbjct 19019227 ACCGCTGGAGACACTCATCTTGGTGGCGAAGATTTTGACAA--CA------GAATGGTTA 19019278 Query 451625 AAAACTGATGTTCAACG----AAAACTAAAAGTA-----GATATTTCTACTAACCAAAAA 451675 | | | ||||||| || | || || | || ||| | ||||| | | Sbjct 19019279 ACCATTT-TGTTCAAGAGTTTAAGAGGAAGAGCAAGAAGGACATTAGTGGTAACCCCAGA 19019337 Query 451676 GCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTCAACA--- 451732 || | || | | | || | || | |||||| | || ||| ||| || Sbjct 19019338 GCTTTGAGGAGGTTGAGGACGGCCTGTGAGAGAGCTAAGAGGACTCTCTCTTCCACCGCG 19019397 Query 451733 CAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTT 451792 ||||| || | | | |||||| | | |||| ||| | || | | || |||| Sbjct 19019398 CAAACCACCATTG---AGATTGATTCTCTCTTTGAGGGAGTTGACTTCTATTCTGCTCTC 19019454 Query 451793 ACCCGTGCTAAATTTGAA----TCAATTTGTTCCAGTATTTTTGCACGGGTAATGAAACC 451848 |||||||||| |||||| |||| || | ||| | | | ||| || | || Sbjct 19019455 ACCCGTGCTAGGTTTGAAGAACTCAACATGGATCT---TTTCAGGAAGTGTA-TGGAGCC 19019510 Query 451849 TGTTGATCAAGTAT-TACATGATTCTAAAATTAGTAAAGATAAAA-TTGATGAAATTGTG 451906 ||| | |||| | | | |||| |||| || | |||| | | || |||| |||| Sbjct 19019511 TGTCAAG-AAGTGTCTCCGTGATGCTAAGATG-GACAAGAGCACAGTTCATGATGTTGTC 19019568 Query 451907 CTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTC------TTCTTAT 451960 ||||| || ||||||||||| || || ||| |||| ||| || || ||||| Sbjct 19019569 CTTGTTGGTGGTTCTACACGTATCCCCAAAGTTCA--ATAGCTTCTCCAAGATTTCTTCA 19019626 Query 451961 TTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCT 452020 | || ||| | || || ||| | | || ||||| || ||||| || ||||||||| Sbjct 19019627 AT----GGTAAAGAGCTCTGCAAGTCCATTAACCCTGACGAGGCTGTGGCTTATGGTGCT 19019682 Query 452021 GCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTA 452080 | ||||| | |||||||||| ||| || |||| | | ||| |||| | Sbjct 19019683 GTGGTTCAGGGTGCTATTCTAAGCGGTGAAGGGAATGAGATGGTGCAAGACCTTCTTCTC 19019742 Query 452081 GTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGAC 452133 | || || || ||||| |||||||| |||||||||| |||||| | ||||| Sbjct 19019743 TTGGACGTGACTCCTCTTTCTCTTGGTCTTGAAACAGCCGGTGGAGTCATGAC 19019795 Score = 107 bits (118), Expect = 8e-18 Identities = 160/226 (71%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA-TC 391108 ||| | || || || || || ||||||| ||||||||||| | || || | | || Sbjct 28156292 ATGCAGATCTTTGTCAAGACGTTGACTGGAAAAACTATTACATTGGAGGTGGGAGAGCTC 28156351 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| | ||| ||| || ||||| ||||| || |||||||| || || Sbjct 28156352 CGATACTATTGACAACGTCAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 28156411 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | || || ||| | || || || |||||||| || ||||| |||||||| || || Sbjct 28156412 GCAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCAGAACATTGGCGGACTACAA 28156471 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | ||||| | ||||||||||| || || | ||| | ||| Sbjct 28156472 CATTCAAAAGGAGTCTACACTTCACTTGGTGTTGCGTCTGCGTGGA 28156517 Score = 89.7 bits (98), Expect = 2e-12 Identities = 241/365 (66%), Gaps = 9/365 (2%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 || ||| | || || ||||| || |||||||| | ||| ||| || | ||||| Sbjct 46617522 TTCGCTGCGGAGGAGATTTCCTCCATGGTTCTCATTAAGATGCGTGAGATTGCAGAGGCT 46617463 Query 451298 TATATTGGT-TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGC 451356 || | ||| || ||| | | | ||||| | ||||| || || || ||||| || | Sbjct 46617462 TACCTCGGTGTCACCA-TCAAGAACGCAGTTGTCACTGTCCCTGCCTACTTCAACGACTC 46617404 Query 451357 ACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTAT 451416 || || || || || || || || || ||||||||||| || ||| | || || || Sbjct 46617403 TCAGCGTCAGGCTACAAAGGACGCTGGTGTGATTGCTGGTTTGAACGTTATGCGTATCAT 46617344 Query 451417 TAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA----- 451471 || || || ||||| |||||| | || || || || | ||| || || || Sbjct 46617343 CAACGAGCCCACAGCCGCTGCTATTGCTTACGGTCTTGACAAA--AAGGCAACCAGCGTT 46617286 Query 451472 GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTT 451531 | ||| || || | || | |||||| ||||||| || ||| |||| || | || Sbjct 46617285 GGAGAGAAGAACGTGTTGATCTTTGATCTTGGTGGTGGGACTTTTGATGTCTCCCTTCTC 46617226 Query 451532 TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGT 451591 | ||||| || || | ||||| || ||||| || ||| || || ||||| || ||| Sbjct 46617225 ACTATTGAGGAAGGTATCTTTGAGGTTAAGGCGACTGCTGGAGACACACATCTTGGTGGT 46617166 Query 451592 GAAGA 451596 || || Sbjct 46617165 GAGGA 46617161 >seq3 Length=64984695 Score = 105 bits (116), Expect = 3e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || || || || || || || ||| ||| Sbjct 16419421 ATGCAGATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 16419362 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| ||||| || ||||| || |||||||| || ||||| ||||| Sbjct 16419361 GACACCATTGACAACGTTAAAGCCAAGATTCAGGACAAGGAAGGTATCCCTCCCGATCAG 16419302 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | |||||| | || || || |||||||| || ||||||||||| || || || Sbjct 16419301 CAGAGGCTCATTTTCGCCGGAAAGCAGCTTGAAGACGGCAGAACTTTGGCCGACTACAAC 16419242 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | || ||||| Sbjct 16419241 ATCCAGAAGGAGTCTACGCTTCA 16419219 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| ||| |||| || || || || || ||||| || || || Sbjct 34860925 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTCA 34860866 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || || |||||||| |||||||| || ||||| ||||| Sbjct 34860865 GACACCATTGACAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCTCCGGATCAG 34860806 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || || || ||||| | || ||||| ||||| || Sbjct 34860805 CAGCGTCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCCGATTACAAC 34860746 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 34860745 ATCCAGAAGGAGTCTACCCTTCAC 34860722 Score = 91.5 bits (100), Expect = 6e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || || || || |||||||| ||||||||| || | || | || | | || Sbjct 1999364 GTGCTGACGAAGATGAAAGAGACAGCAGAAGCTTACTTGGGGAAGTCTGTGAAGAAAGCT 1999423 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | |||||||| ||||| || |||||||| || ||||||| ||||||||||| || Sbjct 1999424 GTTGTCACTGTTCCGGCTTACTTTAATGATGCTCAGAGGCAAGCTACTAAAGATGCTGGT 1999483 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || |||||||| |||| | ||||||||||| || || || |||||||| | Sbjct 1999484 AGGATCGCTGGTTTGGATGTGGAGAGGATTATTAATGAGCCGACGGCTGCTGCTCTTTCT 1999543 Query 451445 TATGG 451449 ||||| Sbjct 1999544 TATGG 1999548 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 || || || |||||||| || |||| || ||||| ||||||||| | ||||| |||| Sbjct 9390054 ATAGGGATAGATCTTGGTACTACCTACTCTTGTGTTGGTGTTTACAAGAATGGTCATGTT 9389995 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || || || || |||||||||||| || | |||||||| ||||| |||| || || Sbjct 9389994 GAGATCATTGCCAATGACCAAGGAAACCGTATCACTCCTTCGTGGGTTGGTTTCACTGAC 9389935 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA 451065 || || ||| | || | |||||||| Sbjct 9389934 AATGAGAGGCTTATTGGTGAGGCTGCTAA 9389906 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || || || || ||||| || || || Sbjct 11141331 ATGCAGATTTTCGTTAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGAGCTCC 11141272 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || ||||| |||||||| |||||||| || || Sbjct 11141271 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAG 11141212 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || ||||| | || ||||| || || || Sbjct 11141211 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAAC 11141152 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 11141151 ATCCAGAAGGAGTCCACCCTTCACTTGGT 11141123 >seq6 Length=39822476 Score = 102 bits (112), Expect = 3e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 || || || |||||||| ||||||| || ||||| || |||||| | ||||| |||| Sbjct 18077242 ATAGGGATAGATCTTGGTACCACCTACTCTTGTGTTGGGGTTTACAAGAATGGTCATGTT 18077183 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||| || || ||||||||||| || | ||||||||||||||| ||| || || Sbjct 18077182 GAAATCATTGCCAATGACCAAGGCAACCGTATTACTCCTTCATGGGTTGCTTTCACCGAC 18077123 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA 451065 || ||||| || | || | |||||||| Sbjct 18077122 TCCGAAAGGCTCATTGGTGAGGCTGCTAA 18077094 >seq7 Length=48366697 Score = 96.9 bits (106), Expect = 1e-14 Identities = 142/201 (71%), Gaps = 9/201 (4%) Strand=Plus/Plus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||| ||| | || || |||| || || ||||| || ||||| | || || ||| || Sbjct 43344189 AGTGACTAAGGCTGTTGTTACGGTGCCTGCTTACTTTAATGACTCGCAGAGGACAGCTAC 43344248 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||||||||| || | ||||||||||| | |||||||| ||||| |||||||| || || Sbjct 43344249 TAAAGATGCTGGTCGCATTGCTGGTTTGGAAGTTCTTCGTATTATCAATGAACCCACGGC 43344308 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491 ||| || | || ||||| | | | ||||| || | | | | |||| |||| Sbjct 43344309 TGCTTCTTTGGCTTATGGTTTTG--------AGAGAAAAAGCA-ATGAGACTATTCTAGT 43344359 Query 451492 ATTTGATTTTGGTGGAGGAAC 451512 |||||| ||||||| || || Sbjct 43344360 CTTTGATCTTGGTGGTGGTAC 43344380 Score = 93.3 bits (102), Expect = 2e-13 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || || || || || || || ||||||||||| Sbjct 20455947 AATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACACTAGAGGTTGAATCATC 20455888 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | || || ||||| || |||||||| || || || || || Sbjct 20455887 CGACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCGGACCA 20455828 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || || | ||||| || || ||||| || || || | ||||| || || Sbjct 20455827 GCAGCGTCTGATCTTTGCCGGGAAGCAGCTGGAAGACGGGAGGACGCTCGCGGACTACAA 20455768 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || |||||||| || | | ||||||||| Sbjct 20455767 CATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGGCTGAGAGGA 20455722 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 || || || |||||||| ||||||| || || || ||||||||| | || || |||| Sbjct 12882305 ATAGGGATAGATCTTGGTACCACCTACTCTTGCGTTGGTGTTTACAAGAACGGTCATGTT 12882246 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||| || || ||||||||||| || | ||||||||| ||||| ||| || || Sbjct 12882245 GAAATCATTGCCAATGACCAAGGCAACCGTATTACTCCTTCCTGGGTTGCTTTCACCGAC 12882186 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA 451065 || || || || | || | |||||||| Sbjct 12882185 TCCGAGAGGCTCATTGGTGAGGCTGCTAA 12882157 >seq9 Length=54679868 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || || |||||||| || || || ||| Sbjct 53991047 ATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATTACTCTCGAGGTCGAGAGCTCT 53991106 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || || || |||||||| |||||||| || || Sbjct 53991107 GACACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAG 53991166 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || || |||||||||||||| ||| | || || || || Sbjct 53991167 CAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACTCTCGCTGACTACAAC 53991226 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| |||| || || | || | || ||||||| Sbjct 53991227 ATCCAGAAGGAGTCAACTCTCCATCTGGTTCTCAGGTTGAGAGG 53991270 Score = 89.7 bits (98), Expect = 2e-12 Identities = 241/365 (66%), Gaps = 9/365 (2%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| | || || ||||| || |||||||| | || ||| || | ||||| Sbjct 54269354 TTTGCCGCCGAGGAGATTTCCTCCATGGTTCTCATCAAGATGCGTGAGATTGCAGAGGCT 54269413 Query 451298 TATATTGGT-TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGC 451356 || |||| || ||| | | | ||||| | ||||| || || || ||||| || | Sbjct 54269414 TACCTTGGCGTCACCA-TCAAGAACGCAGTCGTCACTGTCCCTGCCTACTTCAACGACTC 54269472 Query 451357 ACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTAT 451416 || || || || |||||||| || || ||||| ||||| || ||| | || || || Sbjct 54269473 TCAGCGTCAGGCTACTAAAGACGCTGGTGTGATTGCCGGTTTGAACGTTATGCGTATCAT 54269532 Query 451417 TAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGA--- 451473 || || || || || |||||| | || || || || | || || || ||| Sbjct 54269533 CAACGAGCCCACCGCTGCTGCTATTGCCTACGGTCTTGACAAG--AAGGCAACCAGCGTT 54269590 Query 451474 --AGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTT 451531 ||| || || | || | |||||| ||||||| || ||| |||| || | || Sbjct 54269591 GGAGAGAAGAACGTGTTGATCTTTGATCTTGGTGGTGGTACTTTTGATGTCTCCCTTCTC 54269650 Query 451532 TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGT 451591 | ||||| || || | ||||| || ||||| || ||| ||||||||||| || ||| Sbjct 54269651 ACTATTGAGGAAGGTATCTTTGAGGTTAAGGCGACTGCTGGAGATACTCATCTTGGTGGT 54269710 Query 451592 GAAGA 451596 || || Sbjct 54269711 GAGGA 54269715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974885927347688