Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq9 118 7e-22 seq1 105 4e-18 seq7 102 5e-17 seq6 98.7 6e-16 seq3 98.7 6e-16 seq8 95.1 8e-15 seq5 89.7 3e-13 >seq9 Length=54679868 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| ||||| |||| || |||||||||||||| ||||| | | | | || |||| Sbjct 23042220 CAACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATC 23042279 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || || || || || || || ||||||||| | || | ||||||||||| Sbjct 23042280 CTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTC 23042339 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| |||||| | || | || | |||||| |||| ||| || || Sbjct 23042340 CTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACTTCGAGGGTGATCGT 23042399 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || ||||||||||||||||||||||| Sbjct 23042400 CTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 23042432 Score = 102 bits (112), Expect = 5e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || |||||||||||||| ||||| | | | | || |||| Sbjct 23042448 CAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACCATC 23042507 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || ||||| || || | || |||||||| | || | ||||||||||| Sbjct 23042508 CTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTTGTC 23042567 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||| ||| | || | || | ||| || |||| || || || Sbjct 23042568 TTGGATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGATAGT 23042627 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| ||||||||||| || |||||||||||| Sbjct 23042628 CTTTCCGGTGAGAGTCTTAACGAAGATCTGCATA 23042661 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| || || ||||| | || | ||| |||| |||||||| || || ||||| Sbjct 53991465 TCTTTCTGGATATTGTAGTCAGCGAGTGTGCGTCCATCCTCCAGCTGCTTACCAGCAAAG 53991406 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | || |||||||| ||||| ||||| Sbjct 53991405 ATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTTGCCTTGACATTG 53991346 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| |||| ||| ||||| || || || | |||||| ||| Sbjct 53991345 TCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCTGTCAAAGTCTTGACA 53991286 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 53991285 AAGATCTGCATA 53991274 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | || | ||| |||| || || || || ||||| || Sbjct 23042698 TCCTTCTGGATGTTGTAATCAGCGAGAGTACGTCCATCCTCGAGTTGCTTCCCGGCGAAG 23042757 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||| || | || | ||||||||||| ||||| |||||| Sbjct 23042758 ATAAGCCTTTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGT-- 23042815 Query 34911 GCTATCGAT--TCACCGGCCT--CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| || | || || | ||| ||||| ||||| ||||||||||| Sbjct 23042816 --TGTCGATGGTGTCCGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTT 23042873 Query 34967 CACAAAGATCTGCAT 34981 ||| ||||||||||| Sbjct 23042874 CACGAAGATCTGCAT 23042888 >seq1 Length=43764888 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| ||| | |||| |||| ||| || |||||||| Sbjct 35466745 TCCTTCTGGATGTTGTAGTCCGCAAGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAG 35466686 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | |||||||| || ||||| || ||| Sbjct 35466685 ATGAGCCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTG 35466626 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | || || |||| ||| ||||| ||||| |||||||| |||||| Sbjct 35466625 TCGATGGTATCAGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACA 35466566 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 35466565 AAGATCTGCAT 35466555 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||| ||||| | ||| | || |||| || Sbjct 35467447 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGACCATCCTCA 35467388 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || || |||||||| | || | || |||||||| Sbjct 35467387 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 35467328 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | |||||| || | || || || || Sbjct 35467327 ATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAATGTGATAGTCTTG 35467268 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||||||||| || ||||| Sbjct 35467267 CCGGTAAGGGTCTTCACAAATATTTGCAT 35467239 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||||||||| || || | | | | || |||| || Sbjct 35467675 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCTAAGGTGCGACCATCCTCG 35467616 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || || |||||||| | || | || |||||||| Sbjct 35467615 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGG 35467556 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | || ||||| || Sbjct 35467555 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTG 35467496 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||||||||| ||||||||| Sbjct 35467495 CCGGTCAAGGTCTTCACAAAAATCTGCATA 35467466 >seq7 Length=48366697 Score = 102 bits (112), Expect = 5e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 |||||| |||| || | |||||||||| || || ||||| ||||| ||||||| Sbjct 20455719 TCCTCCTCTCAGCCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 20455778 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 || | | | || |||||||| || |||||||| || || || |||||||| | || Sbjct 20455779 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGG 20455838 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | ||| |||||||| |||||| || || | |||| || | ||||| Sbjct 20455839 GATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCAAC 20455898 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | ||||| || || ||||| || || ||||||||||||||||| || Sbjct 20455899 CTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 20455949 >seq6 Length=39822476 Score = 98.7 bits (108), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || ||||||||||| ||||| || Sbjct 23704377 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAG 23704318 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | || |||||||| ||||| |||||| Sbjct 23704317 ATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 23704258 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| ||||| || ||||| || || || || Sbjct 23704257 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTAACG 23704198 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 23704197 AAGATCTGCATCTT 23704184 >seq3 Length=64984695 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || | ||| || ||||| | || || ||||| ||||| ||||| | | Sbjct 59730640 CCTCCACGCAGACGCAACACTAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCA 59730581 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || ||||| ||||||||||| || || || |||||||| | || Sbjct 59730580 AGGGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCCGGAGGG 59730521 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||| |||||||| ||||| |||||| | || | || ||| || Sbjct 59730520 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAACTCTCGACC 59730461 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || || || |||||||| || ||||| |||||||||||||| Sbjct 59730460 TCTAGAGTAATCGTCTTTCCCGTCAGTGTCTTGACAAAGATCTGCAT 59730414 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | ||| | || |||||||| |||||||| || Sbjct 15816610 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAG 15816551 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | || |||||||| ||||| ||||| || Sbjct 15816550 ATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT 15816493 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || || || |||| ||| || || || ||||| || || || Sbjct 15816492 --TGTCGATGGTGTCGGAGGATTCGACTTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTT 15816435 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 15816434 CACGAAGATCTGCATCTT 15816417 Score = 95.1 bits (104), Expect = 8e-15 Identities = 153/218 (70%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||||||||| ||||| | |||| | || |||| Sbjct 59730854 CAACACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACCATC 59730795 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| || || || || || |||||||| | || | ||| |||||||| Sbjct 59730794 CTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTC 59730735 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTA 34944 ||||| ||||| | |||| || | ||| ||| || || | || | Sbjct 59730734 TTGGATCTTGGCCTTGAC----GTTATCAATGGTGTCCGAACTCTCCACCTCCAGTGTGA 59730679 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| || | ||||| ||||||||||||||| Sbjct 59730678 TGGTCTTTCCGGTTAAGGTCTTGACAAAGATCTGCATA 59730641 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | ||| |||| Sbjct 59730398 CAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCATC 59730339 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| ||| |||||||| || || | | ||||| || | || | || ||||| || Sbjct 59730338 CTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCGGGGGGGATGCCTTCCTTATC 59730279 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTA 34944 ||||| ||||||| | ||||| | ||| || ||| || |||| ||| | Sbjct 59730278 CTGGATCTTGGCTTTGACGT----TGTCGATGGTGTCCGAGCTCTCCACCTCGAGGGTGA 59730223 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||||| ||||||||||| || ||||||||||| Sbjct 59730222 TGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 59730186 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| ||||| | | | | || | || || Sbjct 16418985 ACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCTAAGGTACGACCGTCTTCA 16419044 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || | || |||||||| | || | || |||||||| Sbjct 16419045 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGG 16419104 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | || | || | |||||| || | || ||||| ||| Sbjct 16419105 ATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTT 16419164 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| ||||||||||||||| Sbjct 16419165 CCGGTCAAGGTCTTGACAAAGATCTGCATA 16419194 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848 || ||||| ||||| ||||| | |||| ||| | || || ||||| |||||||| | Sbjct 16419231 TCCTTCTGGATGTTGTAGTCGGCCAAAG--TTCTGCCGTCTTCAAGCTGCTTTCCGGCGA 16419288 Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908 | || || | ||||| || | || | || |||||||| |||||| ||| ||| Sbjct 16419289 AAATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTGAATCTTGGCTTTAACGT 16419348 Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 | || | ||| | || || |||| ||| ||||| ||||||||||||||||| | Sbjct 16419349 TGTCAATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAA 16419408 Query 34969 CAAAGATCTGCAT 34981 | ||||||||||| Sbjct 16419409 CGAAGATCTGCAT 16419421 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| ||||| | | | ||| | || ||| Sbjct 11141807 ACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCGTCTTCC 11141866 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| ||||| ||||| || || | ||||| || | || | || |||||||| Sbjct 11141867 AACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGG 11141926 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| ||| | || | ||| | || || |||| ||| ||||| || Sbjct 11141927 ATCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTC 11141986 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||| ||||| ||||||||||| Sbjct 11141987 CCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 >seq8 Length=41758685 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | ||| | || || ||||| || ||||| || Sbjct 33346227 TCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCGAGCTGCTTCCCGGCGAAA 33346168 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | ||| |||||||| ||||| ||||| || Sbjct 33346167 ATCAGTCGCTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT 33346110 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || |||| ||| || ||||| ||||| || || || Sbjct 33346109 --TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTCCCCGTTAGGGTTTT 33346052 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 33346051 CACGAAGATCTGCATCTT 33346034 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| | ||||| ||||||||||| ||| |||||||||||||| ||||| | Sbjct 10683472 CCACCCCTAAGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCT 10683413 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| |||| || || ||||| || ||||| || || | || || || | || Sbjct 10683412 AGCGTTCGACCATCCTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCAGGTGGT 10683353 Query 34875 ACCCCCTCCTTGTC 34888 | |||||| ||||| Sbjct 10683352 ATCCCCTCTTTGTC 10683339 >seq5 Length=46902585 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || || | | | || |||| || ||||| || |||||||| Sbjct 33725059 TCCTTCTGAATGTTGTAATCGGCCAATGTACGACCATCCTCAAGCTGCTTGCCGGCAAAG 33725000 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| |||| | ||||||||||| ||||| ||||| Sbjct 33724999 ATCAAACGCTGCTGGTCAGGCGGGATTCCCTCCTTGTCTTGTATCTTGGCCTTGAC---- 33724944 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| || | ||| || |||| || || ||||||||||| | ||||| Sbjct 33724943 GTTATCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGATCGTTTTTCCCGTTAAGGTCTT 33724884 Query 34967 CACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 33724883 GACAAAGATCTGCAT 33724869 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | ||| ||| | || || ||||| |||||||| || Sbjct 33724831 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCTCCCGTCCTCGAGCTGCTTTCCGGCGAAG 33724772 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | || | ||||||||||| |||||| ||| || Sbjct 33724771 ATAAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTTGGCTTTAACATTG 33724712 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | || || || | ||| || || ||||||||||| ||||| || Sbjct 33724711 TCGATCGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCCGTGAGTGTCTTAACG 33724652 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 33724651 AAGATCTGCAT 33724641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324503487461808