Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5 132 4e-26 seq3 132 4e-26 seq1 127 2e-24 seq9 111 1e-19 seq4 100 2e-16 >seq5 Length=46902585 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | |||||| || | |||||| ||||| || || || || ||||||||||| Sbjct 33725095 CCTCCACGCAGACGTAACACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCGGCC 33725036 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||||| || ||||| ||||||||||| || || ||||| Sbjct 33725035 AATGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGCGGG 33724976 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || ||||| || || || || | || | ||||| || | ||||| Sbjct 33724975 ATTCCCTCCTTGTCTTGTATCTTGGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACC 33724916 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || |||| |||||| || ||||| || || ||||| ||||||||| Sbjct 33724915 TCGAGTGTGATCGTTTTTCCCGTTAAGGTCTTGACAAAGATCTGCATG 33724868 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301 ||||||||| | ||| | ||| | ||||| || || || || || || ||||||||||| Sbjct 12956450 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 12956391 Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 || || || | || |||| ||||| || || || |||| ||||| ||||| || || Sbjct 12956390 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGG 12956331 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 || ||||| || || || || || || ||| | || | ||||| || | ||| || Sbjct 12956330 GATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 12956271 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | ||| || || |||| ||||| ||||| |||||||| Sbjct 12956270 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 12956223 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || || ||||||||||| || || || || ||||| ||||| | || | | Sbjct 33725312 ACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACC 33725253 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || || || || | |||||| || || || || |||||||| || Sbjct 33725252 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTT 33725193 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || || || | || | ||||| || | || || || || |||| Sbjct 33725192 GTCTTGGATCTTGGCCTTGACGTTATCAATCGTGTCGGAGCTCTCGACCTCCAGTGTGAT 33725133 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || || || || || ||||| || |||||| Sbjct 33725132 GGTCTTACCAGTCAACGTCTTGACAAAGATTTGCATG 33725096 >seq3 Length=64984695 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || || ||||||||||| | || | |||| || | ||| Sbjct 34860723 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCATCCTCGAGCTGC 34860782 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | |||||| ||||| || || |||||||| || |||||||| || Sbjct 34860783 TTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGAATCTTG 34860842 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||||| ||||| |||| ||| |||||||| Sbjct 34860843 GCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCAAGCGTGATCGTCTTGCCGGTC 34860902 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || || || |||||||| Sbjct 34860903 AATGTCTTAACGAAAATCTGCAT 34860925 Score = 131 bits (144), Expect = 1e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| |||||||||||||| || || ||||| || || | ||| || |||| ||||| || Sbjct 34861406 ATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAACTG 34861465 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| ||||| | ||| || || || || || || || ||||| || || || Sbjct 34861466 CTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTT 34861525 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||||||| | ||||| || | ||||| || || ||||| Sbjct 34861526 GGCCTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCCAAAGTGATAGTCTTTCCGGT 34861585 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || || || || || ||||||||| | |||| ||| Sbjct 34861586 CAAGGTCTTGACGAAGATCTGCATGCCTCCGCGTAGA 34861622 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || |||||| || | ||||| ||||||||||| || || ||||| || || Sbjct 34861155 CCTCCACGTAGACGTAAGACCAGGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCT 34861214 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| || |||| ||||| ||||| || ||||| ||||| | ||| || || || || Sbjct 34861215 AGAGTCCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 34861274 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || ||||| || || ||| || | || | |||||| || | ||||| Sbjct 34861275 ATCCCCTCCTTGTCTTGGATCTTGGCTTTCACGTTGTCAATAGTGTCTGAGCTCTCCACC 34861334 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | ||| | ||| || || || || || || ||||| || |||||| Sbjct 34861335 TCCAAAGTAATCGTCTTCCCCGTCAAGGTCTTGACAAAAATTTGCATG 34861382 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| || || || || ||||| || || | ||||| | || ||| Sbjct 11141807 ACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCGTCTTCC 11141866 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || ||||| || ||||| || | | ||| ||||| || ||||||||||| || || || Sbjct 11141867 AACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGG 11141926 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||| ||| || | || | |||||||| ||||||| || || |||| || || Sbjct 11141927 ATCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTC 11141986 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | |||||| || || |||||||| Sbjct 11141987 CCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || ||| || || || || || ||||| || ||||| || ||||| ||||| Sbjct 34861839 CCTCCACGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGCC 34861898 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| ||| | || || | ||||| || || || || | | ||| ||||| || ||| Sbjct 34861899 AAAGTCCTGCCGTCTTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGA 34861958 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| || | || | |||||||| |||| || Sbjct 34861959 ATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCAACC 34862018 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || || ||||| | ||||| ||||| |||||||| Sbjct 34862019 TCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 34862065 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || ||| || || || || || ||||| || || || ||||||||||| || Sbjct 34861611 CCTCCGCGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGCC 34861670 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || ||| | || ||||| ||||| || || || || | | ||| ||||| || || Sbjct 34861671 AAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGG 34861730 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || ||||| || || || ||| || | || | |||||||| | ||||| Sbjct 34861731 ATTCCCTCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTCTCCACC 34861790 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | ||||| || || ||||| || || || || || ||||||||| Sbjct 34861791 TCCAAAGTGATAGTCTTTCCGGTCAACGTCTTGACGAAAATCTGCATG 34861838 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||| || || ||||| || ||||| || || | || | |||| || Sbjct 16418757 ACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCTAAGGTGCGACCATCCTCA 16418816 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | |||||| || || || || ||||||||||| ||||| Sbjct 16418817 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCTTTGTCTTGG 16418876 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | |||||| || | ||||| || || |||| || ||| Sbjct 16418877 ATCTTGGCCTTCACGTTATCAATAGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTG 16418936 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| | ||| || || || ||||||||| Sbjct 16418937 CCGGTAAGAGTCTTCACGAAGATCTGCATG 16418966 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| || || || || ||||| || || | || | | || || Sbjct 16418985 ACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCTAAGGTACGACCGTCTTCA 16419044 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| ||||| | ||| || || || ||||||||||| || ||||| Sbjct 16419045 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGG 16419104 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| || | || | ||||| || | || || || | ||||| || || Sbjct 16419105 ATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTT 16419164 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| |||||||| Sbjct 16419165 CCGGTCAAGGTCTTGACAAAGATCTGCAT 16419193 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||| || || | ||| | |||| || Sbjct 34860945 ACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCG 34861004 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || || || || | |||||| || || || || |||||||| || ||||| Sbjct 34861005 AGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGG 34861064 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | |||||| || | || || || | |||| || ||| Sbjct 34861065 ATCTTGGCCTTCACGTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTCTTG 34861124 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || |||||||||||||| Sbjct 34861125 CCGGTAAGGGTCTTGACAAATATCTGCAT 34861153 >seq1 Length=43764888 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| || || || || ||||||||||| | || ||| |||| ||| Sbjct 35467219 ACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTGCCATCTTCC 35467160 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||||| || ||||| || | | ||| || ||||| ||||| || || || || || Sbjct 35467159 AATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGG 35467100 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| | || | ||||| || | ||||| || || |||| ||| || Sbjct 35467099 ATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTCTTT 35467040 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || ||||| || || || || |||||| Sbjct 35467039 CCTGTCAAAGTCTTGACGAAGATTTGCATG 35467010 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| || || || || || || ||||| || || | ||| | |||| || Sbjct 35467447 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGACCATCCTCA 35467388 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | |||||| || || || ||||||||||| || || || Sbjct 35467387 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 35467328 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | || || || | |||| || ||| Sbjct 35467327 ATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAATGTGATAGTCTTG 35467268 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| | || || |||||||| |||||| Sbjct 35467267 CCGGTAAGGGTCTTCACAAATATTTGCATG 35467238 >seq9 Length=54679868 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || || |||||||| || ||||| || || ||||| || || | || | | Sbjct 23042445 ACGCAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACC 23042504 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || || || ||||||||||| || ||||| ||||| || || || Sbjct 23042505 ATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTT 23042564 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || ||| || | || | ||||| || | ||||| || || |||| Sbjct 23042565 GTCTTGGATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGAT 23042624 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| | ||| || || || |||||||| Sbjct 23042625 AGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 23042660 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | | ||| | ||| || || || || || || || ||||| || ||| Sbjct 53991273 CCACCTCTCAACCTGAGAACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCG 53991214 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| || |||| || | |||||||| || || || | | ||| || || || ||| Sbjct 53991213 AGAGTCCTTCCATCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 53991154 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || | || | |||||||| | || || Sbjct 53991153 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACC 53991094 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | || |||||||| | |||||| || || || ||||| Sbjct 53991093 TCGAGAGTAATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 53991047 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || | | ||| || || | ||||||||||| || || || ||||||||||| | Sbjct 53991731 TTCCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCCG 53991672 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | || | |||| || | || || || || || || | | ||| || || || | Sbjct 53991671 CAAGCGTACGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTG 53991612 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| || || ||||| || || ||| | || | |||||||| | |||| Sbjct 53991611 GGATCCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCAGAGCTCTCCA 53991552 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | ||| | ||||||||||| | || || ||||| |||||||| Sbjct 53991551 CCTCCAAAGTTATTGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 53991503 >seq4 Length=53719093 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || ||||| ||||| || |||||||| || |||| || | |||| || | ||| Sbjct 7247669 TGGAGCGTAGACTCTTTCTGAATATTGTAGTCAGCGAGCGTGCGCCCATCCTCAAGCTGC 7247728 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || || | | ||| || || || ||||||||||| || || || || || Sbjct 7247729 TTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTA 7247788 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||| || | || || || ||||| | || ||||||||| Sbjct 7247789 GCCTTGACGTTGTCAATAGTGTCGGAGCTCTCGACCTCGAGAGTAATGGTCTTGCCGGTT 7247848 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | |||||| || || || ||||| Sbjct 7247849 AGAGTTTTCACGAAAATTTGCAT 7247871 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || ||||| || ||||| || |||||||| || | ||| | |||| || | || Sbjct 7247440 ATGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCAAGCTG 7247499 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || || || || | | ||| || || || || || ||||| || || || || || Sbjct 7247500 TTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATCTT 7247559 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | |||| ||||| || |||| || || | ||| | ||||||||||| Sbjct 7247560 CGCCTTGACATTGTCTATTGTGTCTGAGCTTTCAACCTCCAAAGTAATGGTTTTGCCGGT 7247619 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 7247620 GAGGGTCTTGACAAAAATCTGCAT 7247643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396119572360302