Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 6e-12 >seq3 Length=64984695 Score = 84.2 bits (92), Expect = 6e-12 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 42281 GGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTG 42340 ||| || || ||||||||| | ||| ||| | ||||||||||| |||| ||| ||| Sbjct 30222003 GGGGTCGCTTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGGTTG 30221944 Query 42341 GTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGTTTTATTGTCGCTTTCATT 42399 || | |||||| ||||| || | | | || || || ||||||| |||| |||||| Sbjct 30221943 GTATTTTGATGA-TCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATT 30221885 Query 42400 GCTGCCCCTCCGGTAGACATTGATG 42424 ||||| ||||| ||||| | |||| Sbjct 30221884 GCTGCTCCTCCAGTAGAAAACGATG 30221860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143476747391528