Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 152 4e-32 seq4 131 1e-25 seq3 125 6e-24 seq6 123 2e-23 seq9 120 2e-22 seq7 114 1e-20 seq5 105 5e-18 seq8 100 2e-16 >seq1 Length=43764888 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| ||||| ||||| || ||||| || || ||||| ||||| || Sbjct 35467009 CCTCCACGTAGACGCAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCTGCC 35466950 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| ||||| || || |||||| | ||||| || ||||| || || || Sbjct 35466949 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 35466890 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || ||||||| | || | |||||| || ||| || Sbjct 35466889 ATACCCTCTTTGTCTTGGATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCAACC 35466830 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || || || ||||| ||||| ||||| Sbjct 35466829 TCCAAAGTGATCGTCTTTCCCGTCAACGTCTTAACGAATATTTGCAT 35466783 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| |||||||| || || || |||||||| ||||| || | ||| | ||| Sbjct 35467222 AGGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTGCCATCT 35467163 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || |||||| | || | || ||||| || || ||||||||||| ||||| Sbjct 35467162 TCCAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCC 35467103 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||| ||| | || | ||||| ||| || || || || || || || Sbjct 35467102 TGGATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTC 35467043 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || ||||| Sbjct 35467042 TTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 35467011 >seq4 Length=53719093 Score = 131 bits (144), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||||| |||||| ||||| || || || ||||||||||| || ||||| Sbjct 28156519 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGCC 28156460 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || || || ||||| || | ||||| || ||||| ||||| ||| Sbjct 28156459 AATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 28156400 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT--- 29736 |||||||| |||||||| | ||| |||||| | || | ||| || | || ||| Sbjct 28156399 ATACCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCAATAGTATCGG--AGCTCTCCC 28156342 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | || |||||||| ||||| || || || ||||| |||||||| Sbjct 28156341 ACCTCCAATGTAATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 >seq3 Length=64984695 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| ||||| || |||||||| || |||||||| || || | || ||| ||| Sbjct 11141348 AGCACCAAGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGACCATCC 11141407 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || ||||||||||| | || | | ||||| ||||| ||||||||||||||||| Sbjct 11141408 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCC 11141467 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||| || | || | ||||| ||| || || || ||||| || || Sbjct 11141468 TGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTGATCGTC 11141527 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || || || ||||| Sbjct 11141528 TTTCCTGTTAAAGTCTTCACGAAGATTTGCAT 11141559 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||||||||| |||||||| || || || || ||||| || || || Sbjct 16418967 CCACCACGCAGACGCAGCACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCT 16419026 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || || || || || || ||| | |||||||| ||||| ||||| ||| Sbjct 16419027 AAGGTACGACCGTCTTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGA 16419086 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | || |||||| | || | ||||| || || || Sbjct 16419087 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCAACC 16419146 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || ||||| || ||||| |||||||| Sbjct 16419147 TCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 16419193 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||||| || || || || || ||||| ||||| || | ||||||| Sbjct 34860710 ACGAAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACC 34860769 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || |||||| | || | | ||||||||||| || || || || || Sbjct 34860770 ATCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTT 34860829 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | |||||| | || | ||||| || || || ||||| || | Sbjct 34860830 GTCTTG-AATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCAAGCGTGA 34860888 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || || || ||||| || |||||||| Sbjct 34860889 TCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 34860925 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || || || ||||||||||| || || || | ||||||| ||| Sbjct 16418754 AGGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCTAAGGTGCGACCATCC 16418813 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || |||||||| | || | | ||||| ||||| || || || ||||||||| Sbjct 16418814 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCTTTGTCT 16418873 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || || || | || | |||||| || || || || || || || || Sbjct 16418874 TGGATCTTGGCCTTCACGTTATCAATAGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTC 16418933 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | || || || || |||||||| Sbjct 16418934 TTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 16418965 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || || || || || || ||||| || ||||| | || ||| ||| Sbjct 34860942 AGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCC 34861001 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| ||||||||||| | || | | ||||| || || || || || || |||||| Sbjct 34861002 TCGAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 34861061 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || || || | || | |||||| ||| || || || | || || || Sbjct 34861062 TGGATCTTGGCCTTCACGTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTC 34861121 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | ||| || |||||||||||||| Sbjct 34861122 TTGCCGGTAAGGGTCTTGACAAATATCTGCAT 34861153 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| || ||||| || || ||||| ||||| || || || Sbjct 34861839 CCTCCACGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGCC 34861898 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || || || || || || | || | || ||||||||||| ||| Sbjct 34861899 AAAGTCCTGCCGTCTTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGA 34861958 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||| || | || | |||||||| ||| || Sbjct 34861959 ATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCAACC 34862018 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 ||||| || || || || || || | |||||| ||||| |||||||| | |||| Sbjct 34862019 TCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCATCTGAAAA 34862072 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| |||||||| || || || || ||||| || || || | ||| | || Sbjct 11141804 AGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCGTCT 11141863 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || || |||||| | || | || ||||||||||| ||||| || || ||||| Sbjct 11141864 TCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 11141923 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||| || | || | |||||||| ||| || || || || || || Sbjct 11141924 TGGATCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTC 11141983 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792 || || || | ||||| || || |||||||| | ||| Sbjct 11141984 TTCCCGGTGAGAGTTTTCACGAAGATCTGCATCTGAAA 11142021 >seq6 Length=39822476 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| | |||||| ||||| || || ||||| || ||||| || || || | ||||||| Sbjct 26071112 ACGTAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACC 26071053 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| |||||||| ||||| || | |||| | ||||| ||||| |||||||||||||| Sbjct 26071052 ATCCTCGAGTTGCTTGCCTGCGAAGATCAGACGCTGCTGGTCCGGAGGAATACCCTCTTT 26070993 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | || || | || | ||| || ||| || || || | ||| | Sbjct 26070992 ATCCTG-AATCTTGGCCTTCACGTTGTCAATAGTATCTGAACTCTCCACCTCCAAAGTGA 26070934 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || || |||||||| |||||||| Sbjct 26070933 TTGTCTTCCCGGTCAATGTCTTAACAAAAATCTGCAT 26070897 >seq9 Length=54679868 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||| ||||| || || ||||| |||||||| || || || | ||| ||| Sbjct 23042445 ACGCAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACC 23042504 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || ||||| || | ||||| | ||||| || || ||||||||||| || Sbjct 23042505 ATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTT 23042564 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||| || | || | ||||| || || || || || || || Sbjct 23042565 GTCTTGGATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGAT 23042624 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || | || ||||| || |||||||| Sbjct 23042625 AGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 23042660 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||||||||| || || ||||| |||||||| || || || | ||| ||| Sbjct 23042217 ACGCAACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTACGACC 23042276 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || |||||||| | || | | ||||| || || || || ||||| || Sbjct 23042277 ATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTT 23042336 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||||| | || | ||||| || || ||||| || || | Sbjct 23042337 GTCCTG-AATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACTTCGAGGGTGA 23042395 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | || || ||||| |||||||| Sbjct 23042396 TCGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 23042432 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || || || || ||||| ||||| || | || || ||| Sbjct 23042677 AGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTACGTCCATCC 23042736 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 |||||||| || || || | || | |||||||||||||| || || ||||| ||||| Sbjct 23042737 TCGAGTTGCTTCCCGGCGAAGATAAGCCTTTGCTGATCCGGTGGGATTCCCTCCTTGTCC 23042796 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | ||||| || ||| || ||||| || || || Sbjct 23042797 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTTTCCACCTCAAGGGTGATGGTC 23042856 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || || || || |||||||| Sbjct 23042857 TTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 23042888 >seq7 Length=48366697 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| || |||||||| |||||||| || || || || ||||| || ||||| Sbjct 20455719 TCCTCCTCTCAGCCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 20455778 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || || || || || || ||| | |||| | ||||| ||||| || Sbjct 20455779 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGG 20455838 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||| || ||| || | || ||| | || | ||||| || ||| | Sbjct 20455839 GATCCCTTCCTTGTCCTG-AATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCAA 20455897 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || ||||| || || || |||| |||||| ||||| ||||||||||| Sbjct 20455898 CCTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 20455949 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | | || ||||| ||||| ||||| ||||| || ||||| || |||||| Sbjct 15363330 CCACCCCTAAGCCTCAAGACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCCGCA 15363271 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || ||||| || ||||| | |||| || |||||||||||||| Sbjct 15363270 AGGGTTCTACCGTCTTCTAGTTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGCGGT 15363211 Query 29680 ATACCCTCTTTGTCTTGT 29697 || || |||||||| ||| Sbjct 15363210 ATTCCTTCTTTGTCCTGT 15363193 >seq5 Length=46902585 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| ||| || |||| |||||||| || || || || ||||| ||||| || Sbjct 12956450 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 12956391 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || || || || || || || | |||| || ||||||||||| || Sbjct 12956390 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGG 12956331 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || | || || ||| | || | ||||| || ||| || Sbjct 12956330 GATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 12956271 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | ||||| || || || |||| |||||| ||||| ||||||||||| Sbjct 12956270 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 12956220 Score = 102 bits (112), Expect = 6e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | ||| || || || || || || ||||| ||||| || | ||| | || Sbjct 33724852 AGGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTCCCGTCC 33724793 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || || || || | || | || ||||||||||| ||||||||||| |||||| Sbjct 33724792 TCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCT 33724733 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||| ||| | || | |||||||| ||| || ||||| || || || Sbjct 33724732 TG-AATCTTGGCTTTAACATTGTCGATCGTGTCAGAGCTTTCCACCTCAAGGGTGATCGT 33724674 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || ||||| || |||||||| Sbjct 33724673 CTTTCCCGTGAGTGTCTTAACGAAGATCTGCAT 33724641 >seq8 Length=41758685 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||| || || || | || || ||| ||||| ||||| ||||| | | Sbjct 28102507 CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGA 28102448 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 |||||| ||||||||||| || ||||| ||||||||||| | || |||||| | | Sbjct 28102447 TCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 28102388 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 | | ||||| || || || || || || || || || || || | |||||| || | Sbjct 28102387 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCACGA 28102328 Query 29777 ATATCTGCATTTT 29789 | |||||||| || Sbjct 28102327 AGATCTGCATCTT 28102315 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | | ||| ||||| ||||| ||||| ||||| |||||||| || || || Sbjct 10683472 CCACCCCTAAGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCT 10683413 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || |||||||| |||||| | || | || || ||||| || || Sbjct 10683412 AGCGTTCGACCATCCTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCAGGTGGT 10683353 Query 29680 ATACCCTCTTTGTCTTGT 29697 || ||||||||||| ||| Sbjct 10683352 ATCCCCTCTTTGTCCTGT 10683335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385064804866926