Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 8e-12 >seq9 Length=54679868 Score = 84.2 bits (92), Expect = 8e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||| | | |||| ||| ||||||||| |||| ||||| || Sbjct 47621816 GTTGCGGAGACAGGATTTGAACCTGTGACCTCAAGGTTATGAGCCTTGCGACCTACCAAA 47621875 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 47621876 CTGCTCTACCCCGC 47621889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181532280091332