Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq9 183 6e-41 seq1 158 2e-33 seq3 152 1e-31 seq5 145 1e-29 seq7 132 9e-26 seq4 132 9e-26 seq8 105 1e-17 seq6 91.5 3e-13 seq362 86.0 1e-11 >seq9 Length=54679868 Score = 183 bits (202), Expect = 6e-41 Identities = 173/218 (79%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || | ||| ||||| || || ||||| || || ||||||| | | | ||||| Sbjct 53991946 ACGCAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTACC 53991887 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||| ||||| ||||| ||||| || ||||| || |||||||| Sbjct 53991886 ATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTT 53991827 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || |||||||| || || ||||| || ||||| || | || | || |||||||| |||| Sbjct 53991826 GTCCTGAATCTTAGCCTTGACATTGTCTATCGTGTC-TGAGCTCTCAACTTCCAAGGTTA 53991768 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | |||||||||||||| ||||| |||||||| |||||| Sbjct 53991767 TAGTCTTGCCTGTCAAAGTCTTCACAAATATTTGCATT 53991730 Score = 156 bits (172), Expect = 8e-33 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | ||| || || | ||| ||||| || |||||||| ||||| || |||| Sbjct 53991503 TACCACCTCTTAGACGAAGCACAAGGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCAG 53991444 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || ||||||||||| || || || || || |||| Sbjct 53991443 CGAGTGTGCGTCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGAG 53991384 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| || || |||||||| || ||||| ||||| || || | || | || Sbjct 53991383 GAATACCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTC-TGAGCTCTCA 53991325 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || |||||||||||||| ||||| ||||| |||||||| Sbjct 53991324 ACCTCGAGGGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAGATCTGCAT 53991275 Score = 154 bits (170), Expect = 3e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || | ||| || ||||| || ||||| ||||| ||||| | || | | ||| Sbjct 53991718 ACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCCGCAAGCGTACGACC 53991659 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||| ||||| ||||| || || ||||| || || |||||||| Sbjct 53991658 ATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTT 53991599 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || |||||||| || || ||||| |||||||| ||| || | || || |||||||||| Sbjct 53991598 GTCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCAG-AGCTCTCCACCTCCAAAGTTA 53991540 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || ||||| || | ||||| ||||| |||||||| Sbjct 53991539 TTGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 53991503 Score = 107 bits (118), Expect = 4e-18 Identities = 111/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 82669 TTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTG 82728 ||||||| ||||| || | || ||||||||||| || ||||||||||| |||||||| | Sbjct 23025706 TTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTGG 23025765 Query 82729 CTTTTACATTTTCAATCGTATCATTAG-GTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || || || |||||||| || | || ||| || |||| || || |||||||| || Sbjct 23025766 CCTTGACGTTATCAATCGTGTC-TGAGCTTTCAACCTCCAGGGTGATGGTCTTGCCGGTA 23025824 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 23025825 AGGGTCTTCACGAAGATCTGCAT 23025847 Score = 104 bits (114), Expect = 5e-17 Identities = 120/163 (74%), Gaps = 8/163 (5%) Strand=Plus/Plus Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707 |||| |||||||| ||||| || || |||||||| | || || || | || | Sbjct 23025897 TTCTGCCGTCTTCAAGTTGCTTGCCGGCAAAGATCAACCTCTGCTG--------GGATAC 23025948 Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767 | ||||| ||||||||||| ||||| ||||||||||| ||| | | || || |||| Sbjct 23025949 CCTCCTTGTCTTGAATCTTGGCTTTGACATTTTCAATAGTAACTGAACTCTCAACCTCCA 23026008 Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || ||||| || ||||| ||||| || || || ||||| Sbjct 23026009 AAGTAATGGTCTTTCCCGTCAAAGTCTTAACGAAGATTTGCAT 23026051 >seq1 Length=43764888 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | |||||| || ||||| ||||||||||| ||||| || || ||||| | Sbjct 35467009 CCTCCACGTAGACGCAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCTGCC 35466950 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||| || || || || |||||||||||||| | || || || ||||| || Sbjct 35466949 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 35466890 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || ||||| ||||| ||||| ||||| ||||| || || ||| || Sbjct 35466889 ATACCCTCTTTGTCTTGGATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCAACC 35466830 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| |||||||| || ||||||||||| || ||||| ||||| Sbjct 35466829 TCCAAAGTGATCGTCTTTCCCGTCAACGTCTTAACGAATATTTGCAT 35466783 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| || ||||| || ||||| || || ||||| | | | || || ||| Sbjct 35467222 AGGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTGCCATCT 35467163 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | ||| |||||||||||||| || || || || || ||||| || || ||||| || Sbjct 35467162 TCCAATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCC 35467103 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || ||||| ||||| ||||| || || | || || || | || |||||| Sbjct 35467102 TGGATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTC 35467043 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| ||||| || || || ||||| Sbjct 35467042 TTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 35467011 >seq3 Length=64984695 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||||| || ||||| || ||||| || ||||| ||||| ||||||| Sbjct 34861611 CCTCCGCGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGCC 34861670 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | || |||||||| | || ||||| || ||||| || || || ||||| || || Sbjct 34861671 AAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGG 34861730 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 ||||| |||||||| || ||||| ||||| || || || || || ||| || | || || Sbjct 34861731 ATTCCCTCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAG-AGCTCTCCAC 34861789 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || ||||| || ||||||||||| || || |||||||| Sbjct 34861790 CTCCAAAGTGATAGTCTTTCCGGTCAACGTCTTGACGAAAATCTGCAT 34861837 Score = 141 bits (156), Expect = 2e-28 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || ||||| || ||||| || || ||||| | | | | ||| Sbjct 34860710 ACGAAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACC 34860769 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || |||||||||||||| || | || ||||| ||||| || |||||||| Sbjct 34860770 ATCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTT 34860829 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||||||||| || || ||||| ||||| || || | || | || || || | || | Sbjct 34860830 GTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTC-TGAGCTCTCCACCTCAAGCGTGA 34860888 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| ||||| ||||| || || |||||||| Sbjct 34860889 TCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 34860925 Score = 141 bits (156), Expect = 2e-28 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | ||| | || | ||| || |||||||||||||| || || || |||| Sbjct 34861153 TACCTCCACGTAGACGTAAGACCAGGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAG 34861212 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 |||| | || || || || | || || || |||||||| | || || || || || | Sbjct 34861213 CTAGAGTCCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTG 34861272 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || || ||||| ||||| ||||| ||||| || || ||||| || || | || | || Sbjct 34861273 GGATCCCCTCCTTGTCTTGGATCTTGGCTTTCACGTTGTCAATAGTGTC-TGAGCTCTCC 34861331 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| |||||||| || ||||| ||||| ||||| || ||||| Sbjct 34861332 ACCTCCAAAGTAATCGTCTTCCCCGTCAAGGTCTTGACAAAAATTTGCAT 34861381 Score = 131 bits (144), Expect = 3e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| ||||| || || ||||| || || || || | | | | | ||| || Sbjct 34860942 AGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCC 34861001 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| ||||| ||||| || | || || |||||||| || |||||||| ||| Sbjct 34861002 TCGAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 34861061 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| || || || || ||||| || || | || || ||||| || || ||| Sbjct 34861062 TGGATCTTGGCCTTCACGTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTC 34861121 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || | ||||| |||||||||||||| Sbjct 34861122 TTGCCGGTAAGGGTCTTGACAAATATCTGCAT 34861153 Score = 131 bits (144), Expect = 3e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || |||||||||||||| || || || |||| ||| | || || || || | || Sbjct 34861407 TGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAACTGC 34861466 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| | || || || || || || ||||| |||||||| || ||||| Sbjct 34861467 TTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTG 34861526 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || ||||| ||||| || ||| || | || || |||||||| || ||||| || || Sbjct 34861527 GCCTTGACATTATCAATAGTGTCA-GAGCTCTCCACCTCCAAAGTGATAGTCTTTCCGGT 34861585 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| || || |||||||| Sbjct 34861586 CAAGGTCTTGACGAAGATCTGCAT 34861609 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| || ||||| || ||||| || || || |||| | |||| |||||| Sbjct 11141804 AGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCGTCT 11141863 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | || |||||||||||||| || || || ||||| ||||| || |||||||| || Sbjct 11141864 TCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 11141923 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||||||||| || || || || || ||| ||| || || | || || ||| Sbjct 11141924 TGGATCTTTGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTC 11141983 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | || || || || |||||||| Sbjct 11141984 TTCCCGGTGAGAGTTTTCACGAAGATCTGCAT 11142015 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| ||||| ||||||||||| || ||||| |||| | | | | ||| || Sbjct 11141348 AGCACCAAGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGACCATCC 11141407 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| ||||| ||||| || | || || || ||||| || || || || || Sbjct 11141408 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCC 11141467 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || ||||| || || ||||| || || | || || || | ||| |||||| Sbjct 11141468 TGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTGATCGTC 11141527 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || ||||| || || || ||||| Sbjct 11141528 TTTCCTGTTAAAGTCTTCACGAAGATTTGCAT 11141559 Score = 107 bits (118), Expect = 4e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||||| || ||||| |||||||| || ||||| || || || |||| Sbjct 59730412 CCTCCACGTAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 59730353 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || || || | || ||||| || ||||| | || || ||||| || || Sbjct 59730352 AGAGTACGTCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCGGGGGGG 59730293 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || ||||||||||| || ||||| ||||| || || || || || || || | || || Sbjct 59730292 ATGCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTC-CGAGCTCTCCAC 59730234 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || || | ||||| || || |||||||| Sbjct 59730233 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 59730186 Score = 96.9 bits (106), Expect = 7e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670 || || || || || || || ||||||| | || | | ||| || || |||||| | Sbjct 34130388 AGTGTTGAATCCTTTTGGATGTTATAATATGCAAGCGTACCACCATCCTCGAGTTGTCTA 34130329 Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| || | ||| ||| | | | | || || |||||||| |||||||||||| Sbjct 34130328 CCAGCAAACATGATTCTCTGTAGGTTTTGTGGGATCCCTTCCTTGTCTTGAATCTTTATC 34130269 Query 82731 TTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 |||||||| |||| | || | || | || |||||||| | || | || || || | Sbjct 34130268 TTTACATTCTCAACAATGTC-TAAGCTGTCAACTTCCAAGGCAATGATTTTACCAGTGAG 34130210 Query 82790 CGTCTTTACAAATATCTGCATT 82811 ||| || |||||||| |||||| Sbjct 34130209 CGTTTTCACAAATATTTGCATT 34130188 Score = 87.8 bits (96), Expect = 4e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670 || || || || || || || ||||||| | || | | ||| || || || | ||| Sbjct 34698673 AGTGTTGACTCCTTTTGGATGTTATAATATGCAAGCGTGCGACCATCCTCGAGGTTTTTA 34698732 Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| | | ||| ||| | | ||| || | |||||||| |||||||||||||| Sbjct 34698733 CCAGCAAACGTGATTCTCTGTCGGTTTGGTGGGAGCCCTTCCTTGTCTTGAATCTTTGCC 34698792 Query 82731 TTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 || ||||| |||| | || | || | || ||| | || || || || || || | | Sbjct 34698793 TTCACATTCTCAACAATGTC-TGAGCTGTCAACTACTAAGGTAATGGTTTTACCAGAGAG 34698851 Query 82790 CGTCTTTACAAATATCTGCATT 82811 ||| || |||||||| |||||| Sbjct 34698852 CGTTTTCACAAATATTTGCATT 34698873 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 82586 TCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAG 82645 ||| ||||| | ||||| ||||| ||||| || ||||| || ||||| ||||||| | Sbjct 34699782 TCCGCTCAACCTGAGAACCAAGTGGAGAGTTGAGTCTTTTTGGATATTGTAATCAGCCAC 34699841 Query 82646 AATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTAT 82705 | | || || | || ||||| ||||||| ||||| || || || ||| | Sbjct 34699842 GGTACGGTGATCCTCCATCTGATTTCCGACAAAGATAAGTCTCTGCTGGTCGCTAGGGAC 34699901 Query 82706 TCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 |||||||||||||| ||| |||| || || || ||||| || || Sbjct 34699902 TCCTTCCTTATCTTCTATCATTGCCTTGACGTTGTCAATGGTGTC 34699946 >seq5 Length=46902585 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||| ||| ||||| | ||| || || || || ||||| || || ||||| | Sbjct 12956449 CCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 12956390 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || |||||||| || || || || || ||||| |||| || ||||| || || Sbjct 12956389 AGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGGG 12956330 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| || || ||||| || ||||| || | ||| || Sbjct 12956329 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGACC 12956270 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || ||||||||||| || || | || || ||||| ||||||||| Sbjct 12956269 TCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATT 12956222 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || ||||| || || ||||||| ||| |||| ||||| || || || Sbjct 33724843 TGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTCCCGTCCTCGAGCTGC 33724784 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || ||||| || || || ||||| ||||| || || ||||| ||||||||||| Sbjct 33724783 TTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTTG 33724724 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||| || ||||| ||| ||| || || | || |||||||| || || Sbjct 33724723 GCTTTAACATTGTCGATCGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCCGTG 33724664 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 33724663 AGTGTCTTAACGAAGATCTGCAT 33724641 Score = 136 bits (150), Expect = 8e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || ||||| || ||||| || ||||| || || || || | ||| | | ||| Sbjct 33725312 ACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACC 33725253 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || |||||||| ||||| || | || || |||||||| || |||||||| Sbjct 33725252 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTT 33725193 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||| ||||| || || || || |||||||| || || | || || |||| || | Sbjct 33725192 GTCTTGGATCTTGGCCTTGACGTTATCAATCGTGTCGG-AGCTCTCGACCTCCAGTGTGA 33725134 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || ||||||||||| ||||| || ||||| Sbjct 33725133 TGGTCTTACCAGTCAACGTCTTGACAAAGATTTGCAT 33725097 >seq7 Length=48366697 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||| || || || ||||| || || || || ||||| || || || || | Sbjct 20455720 CCTCCTCTCAGCCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 20455779 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || |||||||| || || || || |||||||| || | || || || || || Sbjct 20455780 AGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGG 20455839 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || |||||||| || || ||||| || ||||| || | ||| || Sbjct 20455840 ATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCAACC 20455899 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || | ||||||||||| || || | || || ||||| ||||||||| || Sbjct 20455900 TCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTTT 20455950 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||| ||||| || |||||||| || || || || | || |||||||||||||| Sbjct 15363312 ACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCCGCAAGGGTTCTACCGTCTTCT 15363253 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTG 82720 ||||| || ||||| ||||| || || || ||||| || ||||||||||| || || || Sbjct 15363252 AGTTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGCGGTATTCCTTCTTTGTCCTG 15363194 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 82618 ATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAA 82677 |||| ||||| || || ||||||| | | | | || ||||| ||||||||||| ||| Sbjct 1147795 ATTCCTTCTGAATCTTGTAATCAGCAACAGTGCATCCATCTTCAAGTTGTTTTCCTTCAA 1147854 Query 82678 AGATTAGTCTTTGTTGAT----CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733 |||| | || || |||| || | || ||| ||| || ||||||||| ||||||| Sbjct 1147855 AGATCAACCTCTGATGATGGTACT-GTGGAATT-TTTCTTTGTCTTGAATCATTGCTTTA 1147912 Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793 || ||| || || | | | ||||||||| | || ||||| ||| |||| || Sbjct 1147913 ACCCTTTGTATGGTGTTGGAGGATAGCACTTCCAAAATAATAGTCTTCCCTTTCAAATTC 1147972 Query 82794 TTTACAAATATCTG 82807 || ||||| ||||| Sbjct 1147973 TTGACAAAGATCTG 1147986 >seq4 Length=53719093 Score = 132 bits (146), Expect = 9e-26 Identities = 168/229 (73%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | || ||||| || ||||| || ||||| || || || || || || || | Sbjct 28156519 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGCC 28156460 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | |||| |||||||| || || || || || ||||| | || || || || ||||| Sbjct 28156459 AATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 28156400 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG--GTTCTA 82761 || || ||||| ||||| ||||||||||| || || ||||| ||||| || | | | Sbjct 28156399 ATACCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCAATAGTATC-GGAGCTCTCCCA 28156341 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || || || || ||||||||||| ||||| |||||||| Sbjct 28156340 CCTCCAATGTAATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 >seq8 Length=41758685 Score = 105 bits (116), Expect = 1e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 |||||| ||||| ||||| || |||||||| || || || |||| ||| ||| ||| || Sbjct 10683458 CAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTTCGACCATC 10683399 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || |||||||| ||||||||||| || || |||||||| || ||||| || || || || Sbjct 10683398 CTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCAGGTGGTATCCCCTCTTTGTC 10683339 Query 82718 TTG 82720 || Sbjct 10683338 CTG 10683336 Score = 105 bits (116), Expect = 1e-17 Identities = 144/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670 ||| |||| ||||||| || || || |||| ||| | | || ||||| || |||||| Sbjct 28102516 AGATTAGAC-CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTT 28102458 Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 ||||| ||||| | || || ||||| ||||| || ||||| || ||||| ||||| || Sbjct 28102457 CCAGCGAAGATCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCC 28102398 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| || || || || | || || || | || || ||||| || |||| Sbjct 28102397 TTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGG 28102338 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || || || |||||||| Sbjct 28102337 GTTTTCACGAAGATCTGCAT 28102318 >seq6 Length=39822476 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||||| || ||||| || || || || ||||| || || ||||||| Sbjct 26070895 CCTCCACGTAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 26070836 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | || |||||||| || || |||||||||||||| || || || || || || || Sbjct 26070835 AATGTCCTGCCGTCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 26070776 Query 82704 ATTCCTTCCTTATCTTGAATCTT 82726 || || ||||| || |||||||| Sbjct 26070775 ATACCCTCCTTGTCCTGAATCTT 26070753 >seq362 Length=20426 Score = 86.0 bits (94), Expect = 1e-11 Identities = 162/230 (70%), Gaps = 9/230 (4%) Strand=Plus/Plus Query 82587 CCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGA 82646 ||||| || | |||| | ||| ||||| || | ||| || |||| |||| | |||| Sbjct 16394 CCTCTAAACCTGAGAATCATGTGGAGAGTTGAATTTTTTTGGATATAGTAATTAAATAGC 16453 Query 82647 -ATTCTACCG---TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | || | || || || |||| | |||||| || | || || | || ||| Sbjct 16454 CAAGGGACGGCATTCCTCAAGCATTTTTTCCCCAAAGACAAGCATCTGCTGGTATGTAGG 16513 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAA-TCGTATCATTAG-GTTCT 82760 ||||||||||||||||| |||||| |||| || ||| ||| | || || | || ||| Sbjct 16514 GATTCCTTCCTTATCTTGTATCTTTTCTTTGAC-TTTGCAAGTGGTGTC-TGAGCTTTCG 16571 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | ||||| ||||||||||| ||| || ||||||| || ||||| Sbjct 16572 ACCTCAAGAGTTAAGGTCTTGCCTGTAAACATC-TTACAAAGATTTGCAT 16620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981413505268354