Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 >seq1 Length=43764888 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 41004 CGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCT 41063 || || || ||| ||| || ||||| || | ||| | | ||||||| | || || Sbjct 2358871 CGGCGGATTATAATGTCGGCTTGGAATCCTTCTGACCTTAAGGCGATGGCACTTCCTCCA 2358930 Query 41064 TGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAA 41123 || || |||| ||||||||||||| ||||| || || ||||||||| ||||||| Sbjct 2358931 TGCCACATGTTTGCTCAGTTTTACGTTGCAAATGGAGAGCTTTCATGTCAAATGTATCAG 2358990 Query 41124 AGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGC 41164 | |||| ||| ||||| || || || ||||||||||| || Sbjct 2358991 CGCTCAGCTGATATGGGTCTTGGTGTACCGTTTAACATCGC 2359031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397296700380430