Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_
202014-05-27] 32,886 sequences; 488,954,160 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq9 140 3e-28
seq3 131 1e-25
seq1 127 2e-24
seq4 125 6e-24
seq5 122 8e-23
seq7 116 3e-21
seq6 113 4e-20
seq8 95.1 1e-14
>seq9
Length=54679868
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||| ||| |||| || || || ||||| |||
Sbjct 23042660 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACACTCGAGGTGGAGAGCTCC 23042601
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || |||||||| || || || || ||||| ||
Sbjct 23042600 GACACCATCGACAACGTGAAAGCTAAGATCCAAGACAAGGAGGGTATTCCTCCCGACCAG 23042541
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||||||||| || | || || || ||| | | || ||||||
Sbjct 23042540 CAGCGTTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAC 23042481
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||||||| | || ||||| |||||| | || ||||||||
Sbjct 23042480 ATTCAGAAAGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGCAT 23042431
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || ||||| ||||| ||| | || || || ||||| || ||
Sbjct 23042433 CATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACGATCACCCTCGAAGTTGAGAGCTC 23042374
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | ||||| || ||||| ||||| || || || ||||| || ||
Sbjct 23042373 CGACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCAGACCA 23042314
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| ||||| || | || || || ||| | | || |||||
Sbjct 23042313 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAA 23042254
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||| || |||||||| | |||||||| |||||| | || ||||||
Sbjct 23042253 CATTCAGAAAGAGTCGACTCTTCATTTGGTGTTGCGTCTCCGTGGTGGC 23042205
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| || ||| |||| |||||| |||| || | ||||| || ||
Sbjct 53991731 ATGCAAATATTTGTGAAGACTTTGACAGGCAAGACTATAACCTTGGAAGTTGAGAGCTCA 53991790
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | ||||| || ||||| ||||| ||||| || || || || |||
Sbjct 53991791 GACACGATAGACAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAA 53991850
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || ||||| | || || || ||| | | |||||||||
Sbjct 53991851 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTAGGACTTTGGCTGATTACAAC 53991910
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | || | || ||||| | || |||||
Sbjct 53991911 ATCCAGAAGGAGTCGACTCTTCACCTTGTGCTGCGTCTTCGTGGTGG 53991957
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||| ||| | || || ||||| |||||| ||
Sbjct 23042888 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCG 23042829
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| || || || ||||| |||||
Sbjct 23042828 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGATCAG 23042769
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | |||||| || ||| | || || | || | | |||||||||
Sbjct 23042768 CAAAGGCTTATCTTCGCCGGGAAGCAACTCGAGGATGGACGTACTCTCGCTGATTACAAC 23042709
Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191
|| || |||||||||||| | |||
Sbjct 23042708 ATCCAGAAGGAGTCGACCCTTCAT 23042685
>seq3
Length=64984695
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||||| ||||||||| | || || || || ||||| ||
Sbjct 16418966 CATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACCATCACACTGGAGGTGGAGAGCTC 16418907
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | || || || || ||||||||||||||||| || || || ||
Sbjct 16418906 CGACACTATTGATAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCTCCGGACCA 16418847
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| ||||| || | || || || ||| | | || |||||
Sbjct 16418846 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTAGCAGACTACAA 16418787
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||||||||||||||||||| | || |||||
Sbjct 16418786 CATTCAAAAGGAGTCGACCCTTCACTTGGT 16418757
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || ||||| ||| | || || ||||| || ||| ||
Sbjct 34862065 ATGCAGATCTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTTGAGGTTGAAAGCTCT 34862006
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || || ||||| |||||||| || || |||||
Sbjct 34862005 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 34861946
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| || || | |||||| | ||| | |||| ||||||
Sbjct 34861945 CAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCAGGACTTTGGCCGACTACAAC 34861886
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || ||||| |||||| | || || |||||
Sbjct 34861885 ATCCAAAAGGAGTCTACGCTCCACTTGGTCTTGCGTCTACGTGGAGGCAT 34861836
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||||||| | || || ||||| ||||| ||
Sbjct 34860925 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTCA 34860866
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| |||||||| || || |||||
Sbjct 34860865 GACACCATTGACAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCTCCGGATCAG 34860806
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || || || | || || || ||| | |||||||||||
Sbjct 34860805 CAGCGTCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCCGATTACAAC 34860746
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || |||||||| ||| | || |||| | ||| | || ||||||
Sbjct 34860745 ATCCAGAAGGAGTCTACCCTTCACCTGGTCCTTCGTCTCCGTGGTGGC 34860698
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || | ||||| ||| | || || || || ||||| ||
Sbjct 59730642 ATGCAGATCTTTGTCAAGACCTTAACCGGAAAGACCATCACACTGGAGGTGGAGAGTTCG 59730701
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || |||||||| ||||| || || || || ||
Sbjct 59730702 GACACCATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 59730761
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || | || || || ||| || |||| ||||||
Sbjct 59730762 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAAC 59730821
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||||| |||||||| || | || ||||| |||||| | || ||||||
Sbjct 59730822 ATTCAGAAGGAGTCTACTCTCCACTTGGTGTTGCGTCTCCGTGGTGGC 59730869
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || ||||| ||| | |||
Sbjct 15816420 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAAGTCGAATCCTCC 15816479
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| |||||||| || || || ||
Sbjct 15816480 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 15816539
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || || |||| ||| | ||| | |||| ||||||
Sbjct 15816540 CAGCGACTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTCGCCGACTACAAC 15816599
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || ||||||||||| | || | || | ||| | || ||||||
Sbjct 15816600 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGGTGGC 15816647
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||||||| | || || ||||| ||||| |||
Sbjct 11141331 ATGCAGATTTTCGTTAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGAGCTCC 11141272
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || |||||||| ||||| || || || || ||
Sbjct 11141271 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAG 11141212
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || | || || || ||| | | || ||||||
Sbjct 11141211 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAAC 11141152
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| ||| | || ||||| | ||| | || || ||
Sbjct 11141151 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTCCGTCTCCGTGGAGG 11141105
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||| ||| | || ||| | || ||||| ||
Sbjct 11141787 ATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACGATCACTTTGGAGGTGGAGAGCTCT 11141728
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || || || || || || ||||| || ||
Sbjct 11141727 GACACCATCGATAACGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 11141668
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||||| || ||||| || | |||| | |||| ||||||
Sbjct 11141667 CAGAGGTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGCAGGACCTTGGCCGACTACAAC 11141608
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||||||| | || |||| |||||| | || || |||||
Sbjct 11141607 ATTCAGAAAGAGTCGACCCTTCACCTGGTCTTGCGTCTACGTGGAGGCAT 11141558
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || ||||||||| | || || | || || || ||
Sbjct 34861153 ATGCAGATATTTGTCAAGACCCTTACCGGCAAGACCATCACATTGGAGGTTGAGAGTTCG 34861094
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || |||||||| |||||||| || || || ||
Sbjct 34861093 GACACTATTGATAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 34861034
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| |||||||| | || || || || | | || ||||||
Sbjct 34861033 CAGCGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGTCGTACTTTGGCGGACTACAAC 34860974
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| || |||||||| || | || |||||
Sbjct 34860973 ATCCAGAAGGAGTCAACTCTCCACTTGGT 34860945
>seq1
Length=43764888
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||||||| | || || || || ||||| |||
Sbjct 35467467 ATGCAGATTTTTGTGAAGACCTTGACCGGCAAGACCATCACACTGGAGGTGGAGAGCTCC 35467526
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || |||||||| |||||||| || || || ||
Sbjct 35467527 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAG 35467586
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || | || || || ||| | | |||||||||
Sbjct 35467587 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTAGCAGATTACAAC 35467646
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | || ||||| | ||| | || ||||| ||
Sbjct 35467647 ATTCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTAT 35467696
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || || ||| |||| || ||| | || || || || ||||| ||
Sbjct 35467010 CATGCAAATCTTCGTCAAGACTTTGACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTC 35467069
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | || ||| ||||| || ||||| || || || || ||||| ||
Sbjct 35467070 CGACACCATTGACAATGTGAAAGCCAAAATCCAGGACAAGGAGGGTATTCCTCCCGACCA 35467129
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || || ||||||||||| | |||| | ||||||||||
Sbjct 35467130 GCAGAGGCTTATCTTTGCTGGAAAGCAATTGGAAGATGGCAGGACCTTGGCCGATTACAA 35467189
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | || ||||| | | | || ||||||||
Sbjct 35467190 CATTCAGAAGGAGTCTACGCTTCACTTGGTCCTCAGGCTCCGTGGTGGCAT 35467240
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| ||||| || || || |||| || ||| | || ||| | || || ||| |||
Sbjct 35466783 ATGCAAATATTCGTTAAGACGTTGACGGGAAAGACGATCACTTTGGAGGTTGAAAGCTCC 35466842
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || || ||||||||||| || || ||||| || ||
Sbjct 35466843 GACACTATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 35466902
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || | || || || ||| | | |||||||||
Sbjct 35466903 CAGAGGTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGATTACAAC 35466962
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | || ||||| ||||| | || || |||||
Sbjct 35466963 ATCCAGAAGGAATCTACTCTTCACTTGGTCCTGCGTCTACGTGGAGGCAT 35467012
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| |||||||| || || || ||||||||| |||| || | || || || ||
Sbjct 35467238 CATGCAAATATTTGTGAAGACCCTTACCGGCAAGACTATCACATTGGAGGTTGAGAGCTC 35467297
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | ||||| || || || ||||| |||||||| || || || ||
Sbjct 35467298 AGACACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCA 35467357
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || | || || || || || | || |||||
Sbjct 35467358 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTTGCTGACTACAA 35467417
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||| || ||||||||||| | || |||||
Sbjct 35467418 CATCCAGAAGGAGTCGACACTTCACTTGGT 35467447
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||| ||||| ||| | || || || || |||||| ||
Sbjct 35466555 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 35466614
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || || || || || || || || ||||| || ||
Sbjct 35466615 GATACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 35466674
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||||| || ||||| || | || || | || ||||||
Sbjct 35466675 CAGAGGCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTTGCGGACTACAAC 35466734
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||||||
Sbjct 35466735 ATCCAGAAGGAGTCGAC 35466751
>seq4
Length=53719093
Score = 125 bits (138), Expect = 6e-24
Identities = 167/231 (72%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG-TC 27046
|||||||| ||||| || || |||| || || ||||||| | || |||| | | ||
Sbjct 28156292 ATGCAGATCTTTGTCAAGACGTTGACTGGAAAAACTATTACATTGGAGGTGGGAGAGCTC 28156351
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | |||||| ||| || |||||||| || || || || || || ||
Sbjct 28156352 CGATACTATTGACAACGTCAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 28156411
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||| || | |||||| | || | | || |||||
Sbjct 28156412 GCAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCAGAACATTGGCGGACTACAA 28156471
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||||||| || | || ||||| |||||| |||| || |||||
Sbjct 28156472 CATTCAAAAGGAGTCTACACTTCACTTGGTGTTGCGTCTGCGTGGAGGCAT 28156522
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || ||| | |||
Sbjct 24867382 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAATCCTCC 24867323
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||| |||||||| || || || ||
Sbjct 24867322 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAG 24867263
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || || | || ||| | |||| | |||| ||||||
Sbjct 24867262 CAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGCAGGACCCTCGCCGACTACAAC 24867203
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||||||
Sbjct 24867202 ATCCAGAAGGAGTCGAC 24867186
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || |||||||| | |||||| | || || ||| ||
Sbjct 7247643 ATGCAGATTTTTGTCAAGACCCTCACCGGCAAAACCATTACTTTGGAGGTTGAAAGCTCA 7247584
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| ||||| || ||||| || ||
Sbjct 7247583 GACACAATAGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGGATCCCACCAGACCAG 7247524
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || ||||| | || || || || || | |||||||||
Sbjct 7247523 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACTCTTGCGGATTACAAC 7247464
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| || | ||| | || | ||| | || |||||
Sbjct 7247463 ATCCAAAAGGAGTCTACGCTCCATCTTGTGCTTCGTCTTCGTGGTGG 7247417
>seq5
Length=46902585
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | || || | || || ||| | |||
Sbjct 12956223 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCTTAGAGGTCGAATCATCC 12956282
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || || || || ||||| ||||| || ||||| |||||
Sbjct 12956283 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGATCAG 12956342
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || || |||||||| | ||| | |||||||||||
Sbjct 12956343 CAGCGACTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACACTCGCCGATTACAAC 12956402
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | || ||||| | ||| || | || ||
Sbjct 12956403 ATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCCGTCTGAGAGGAGG 12956449
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || | || || || | || || || || ||||| ||
Sbjct 33724868 CATGCAGATCTTTGTCAAGACCTTAACGGGAAAAACGATCACACTCGAGGTGGAGAGCTC 33724927
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | ||||| || || |||||||| || || || || || || ||
Sbjct 33724928 CGACACCATCGATAACGTCAAGGCCAAGATACAAGACAAGGAGGGAATCCCGCCTGACCA 33724987
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||||| || | |||||||| || | || || || || | ||||||||||
Sbjct 33724988 GCAGCGTTTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACATTGGCCGATTACAA 33725047
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | ||| | || || ||| |||| || |||||
Sbjct 33725048 CATTCAGAAGGAGTCTACTCTTCATCTCGTGTTACGTCTGCGTGGAGGCAT 33725098
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | || || ||||| |||||| ||
Sbjct 33724641 ATGCAGATCTTCGTTAAGACACTCACGGGAAAGACGATCACCCTTGAGGTGGAAAGCTCT 33724700
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || ||| || ||||||||||| || || || || || |||||
Sbjct 33724701 GACACGATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAG 33724760
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| || || | || ||| | ||| | | |||||||||
Sbjct 33724761 CAGAGGCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGGAGAACCCTAGCTGATTACAAC 33724820
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||||||| ||||| | || | | | || ||||||||
Sbjct 33724821 ATCCAGAAGGAGTCGACTCTACATCTCGTCCTCAGGCTACGTGGTGGCAT 33724870
>seq7
Length=48366697
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | || || || || || ||| | |||
Sbjct 20455946 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACACTAGAGGTTGAATCATCC 20455887
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || || ||||| ||||| ||||| || ||||| || ||
Sbjct 20455886 GACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAG 20455827
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||| || || |||||||| | ||| | | || ||||||
Sbjct 20455826 CAGCGTCTGATCTTTGCCGGGAAGCAGCTGGAAGACGGGAGGACGCTCGCGGACTACAAC 20455767
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| || ||||||||||| | || |||||
Sbjct 20455766 ATCCAGAAGGAGTCGACGCTTCACTTGGT 20455738
>seq6
Length=39822476
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || || | |||
Sbjct 23704187 ATGCAGATCTTCGTTAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTCGAGTCCTCC 23704246
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| |||||||| || || || ||
Sbjct 23704247 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 23704306
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| ||||| |||||||| | ||| | |||| ||||||
Sbjct 23704307 CAGCGACTGATCTTCGCCGGGAAACAGCTGGAAGACGGCCGTACCCTCGCCGACTACAAC 23704366
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | ||| | || | ||| | || |||||
Sbjct 23704367 ATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGTCTCCGTGGTGG 23704413
>seq8
Length=41758685
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| |||||||| ||| | || || || || || || | |||
Sbjct 28102318 ATGCAGATCTTCGTGAAAACCCTGACCGGGAAGACCATCACCCTCGAGGTCGAGTCCTCC 28102377
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||||||||| || || || |||||
Sbjct 28102378 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAG 28102437
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142
||||| || || | ||| || ||||| | |||||
Sbjct 28102438 CAGCGATTGATCTTCGCTGGAAAACAGCTCGAAGA 28102472
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || || | || || || || || || | |||
Sbjct 33346037 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAAACAATCACCCTCGAGGTCGAGTCCTCC 33346096
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| ||||| || || ||||| ||
Sbjct 33346097 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCTCCCGACCAG 33346156
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || || | |||||| | || | |||| ||||||
Sbjct 33346157 CAGCGACTGATTTTCGCCGGGAAGCAGCTCGAAGACGGACGCACGCTCGCCGACTACAAC 33346216
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || ||||||||||| | ||| | || | ||| | || || |||
Sbjct 33346217 ATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGTCTCCGTGGGGGC 33346264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434739615918720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |