Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8 145 7e-30 seq4 134 1e-26 seq9 122 8e-23 seq6 122 8e-23 seq3 116 3e-21 seq5 114 1e-20 seq1 111 1e-19 >seq8 Length=41758685 Score = 145 bits (160), Expect = 7e-30 Identities = 176/235 (75%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | || ||||| ||||| ||||||||| ||||| ||||||| Sbjct 33346265 CGCCCCCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 33346206 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCG 41752 ||| ||||| |||| ||||||||||| |||||||| ||||| ||||| ||||| | | Sbjct 33346205 CGAGCGTGCGTCCGTCTTCGAGCTGCTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAG 33346146 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACT 41810 ||| | || ||||||||| ||| || ||| || | || | |||||| |||| Sbjct 33346145 GGATCCCT-TCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAGGACT 33346089 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | ||||| | || || ||||| ||||| || || || ||||| |||||||| || Sbjct 33346088 CGACCTCGAGGGTGATTGTTTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 33346034 >seq4 Length=53719093 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| || || | || || || ||||| ||||||||| ||||| ||||||| Sbjct 24867154 CGCCACCGCGGAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 24867213 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 |||||| | |||| ||||||||||| |||||||| ||||| ||||| ||||||| | Sbjct 24867214 CGAGGGTCCTGCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCG 24867273 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || ||||||| | || | || || | ||| | | | |||||| || || Sbjct 24867274 GGATGCCTTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCG 24867332 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || ||||| || ||||| || || || ||||| |||||||| || Sbjct 24867333 ACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 24867385 Score = 120 bits (132), Expect = 3e-22 Identities = 167/230 (73%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||||| || || || |||||| |||||||| ||||| | Sbjct 28156520 GCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCCGC 28156461 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || | |||| || ||||||||||||||||| |||| | ||| ||||||| || Sbjct 28156460 CAATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 28156401 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT-CC 41812 || | |||||||| | || | ||||||| ||| | | | ||| ||| || || Sbjct 28156400 AATACCCTCCTTGT-CTTGGATCTTTGCTTTGACGTTGTCAATAGTATCGGAGCTCTCCC 28156342 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || ||||| || |||| |||||| || || |||||||| Sbjct 28156341 ACCTCCAATGTAATAGTTTTTCCAGTCAACGTCTTGACAAAGATCTGCAT 28156292 >seq9 Length=54679868 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||||| || || || ||| ||||||||||| ||||| | Sbjct 23042433 GCCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGC 23042492 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || | || |||||||||||||||||||| |||| ||||| ||||| | || Sbjct 23042493 CAAGGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGG 23042552 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||| | || | || |||| ||| | | | |||||| ||||| Sbjct 23042553 AATACCCTCCTTGT-CTTGGATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCA 23042611 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| ||||| |||||||| Sbjct 23042612 CCTCGAGTGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 23042660 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||||| ||| || || ||| ||||||||||| ||||| | Sbjct 23042205 GCCACCACGGAGACGCAACACCAAATGAAGAGTCGACTCTTTCTGAATGTTGTAGTCAGC 23042264 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || | || |||||||||||||| ||||| || || ||||| ||||| | || Sbjct 23042265 CAAGGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGG 23042324 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| | || || | ||| | | | |||||| ||| | Sbjct 23042325 GATTCCCTCCTTGTCC-TGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 23042383 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || ||||| || || || || ||||| || || ||||||||| Sbjct 23042384 CTTCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATG 23042433 Score = 98.7 bits (108), Expect = 9e-16 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||| || || || || ||||||||| || || || || | Sbjct 53991729 CCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCCGCA 53991670 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 || || || | || |||||||| || || ||||| || || | ||| ||||| | ||| Sbjct 53991669 AGCGTACGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGG 53991610 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTC---GCTCGACT 41810 | | || ||||||||| ||| | || || | || | || ||||| |||| | Sbjct 53991609 ATCCCT-TCCTTGTCC-TGAATCTTCGCCTTCACATTGTCAATCGTGTCAGAGCTC---T 53991555 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||| ||||| ||||| || || || ||||| || ||||||||||| Sbjct 53991554 CCACCTCCAAAGTTATTGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 53991503 >seq6 Length=39822476 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||||||||| || || || ||| ||||| ||||| ||||| | Sbjct 26071123 CCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCC 26071064 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||| |||||||| ||||| ||||| ||||| ||||||| ||| Sbjct 26071063 AAGGTGCGACCATCCTCGAGTTGCTTGCCTGCGAAGATCAGACGCTGCTGGTCCGGAGGA 26071004 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| || ||| ||| | || || | ||| | | | ||| || |||||| Sbjct 26071003 ATACCCTCTTTATCC-TGAATCTTGGCCTTCACGTTGTCAATAGTATCTGAACTCTCCAC 26070945 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || || |||| ||||| || |||||||||||| Sbjct 26070944 CTCCAAAGTGATTGTCTTCCCGGTCAATGTCTTAACAAAAATCTGCATG 26070896 >seq3 Length=64984695 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| ||||||||| ||||| ||||| | Sbjct 11141105 CCTCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCC 11141164 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||||||||| |||||||| || || ||||| ||||| | ||| Sbjct 11141165 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGA 11141224 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| ||| || |||| ||| | | | |||||| |||||| Sbjct 11141225 ATACCTTCCTTGTCTTGGATCTTGGCCTTC-ACGTTGTCAATGGTGTCGGAGCTCTCCAC 11141283 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || |||| ||||| |||||||||||||| Sbjct 11141284 CTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCAT 11141331 Score = 116 bits (128), Expect = 3e-21 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||||||||| || |||| || ||||| ||||||||| || || || || | Sbjct 34861610 GCCTCCGCGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGC 34861669 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| | |||| || | |||||| |||||||| || || | ||| || |||| || Sbjct 34861670 CAAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGG 34861729 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | |||||| ||| || | || |||| |||| | | | ||||| ||| || Sbjct 34861730 GATTCCCTCCTTATCC-TGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCT---CT 34861785 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||||| || || || || || |||| |||||| ||||||||||||||| Sbjct 34861786 CCACCTCCAAAGTGATAGTCTTTCCGGTCAACGTCTTGACGAAAATCTGCATG 34861838 Score = 114 bits (126), Expect = 1e-20 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || ||||||||||| ||||| || ||||| || ||||| ||||| ||||| | Sbjct 34861155 CCTCCACGTAGACGTAAGACCAGGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCT 34861214 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || | |||||||||||| || |||| | ||| ||||||| || Sbjct 34861215 AGAGTCCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 34861274 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||||| | || | || |||| ||| | | | |||||| ||| ||| Sbjct 34861275 ATCCCCTCCTTGT-CTTGGATCTTGGCTTTCACGTTGTCAATAGTGTCTGAGCT---CTC 34861330 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| || ||||| || ||||||| ||||| || ||||| |||||| Sbjct 34861331 CACCTCCAAAGTAATCGTCTTCCCCGTCAAGGTCTTGACAAAAATTTGCATG 34861382 Score = 114 bits (126), Expect = 1e-20 Identities = 168/233 (72%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||||| || || || ||||||||||||||| ||||||| Sbjct 59730869 GCCACCACGGAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGC 59730810 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 |||||||| | || || |||||||| || ||||| || || ||||| |||||| | || Sbjct 59730809 AAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 59730750 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA-CAGTGTCGCTCGA---C 41809 || | || |||||||| ||| || ||| |||| | || || | ||| | Sbjct 59730749 GATCCCT-TCCTTGTCTTGGATCTTGGCCTT----GACGTTATCAATGGTGTCCGAACTC 59730695 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||||| || || || || || || | ||||| || || |||||||| Sbjct 59730694 TCCACCTCCAGTGTGATGGTCTTTCCGGTTAAGGTCTTGACAAAGATCTGCAT 59730642 Score = 111 bits (122), Expect = 1e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||||||| || ||||| || || || ||| ||||||||||| ||||||| Sbjct 11141560 GCCTCCACGTAGACGCAAGACCAGGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCGGC 11141619 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| | | || || | |||||||||||| || |||| | ||| ||||||| || Sbjct 11141620 CAAGGTCCTGCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 11141679 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | |||||| ||| || | || || | |||| | | ||||| ||| || Sbjct 11141680 GATTCCCTCCTTATCC-TGGATCTTGGCCTTAACGTTATCGATGGTGTCAGAGCT---CT 11141735 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||| || ||||| || || || || ||||| ||||| |||||||| Sbjct 11141736 CCACCTCCAAAGTGATCGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 11141787 Score = 111 bits (122), Expect = 1e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| || || || ||||||||| ||||| || |||| Sbjct 34860698 GCCACCACGGAGACGAAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGC 34860757 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || ||||||||||| || || || || || ||||| || |||| || Sbjct 34860758 CAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGG 34860817 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | || ||||||| | ||| | || || | || | | | ||||| ||| || Sbjct 34860818 GATGCCTTCCTTGT-CTTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCT---CT 34860873 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| | ||| ||||| || || |||| ||||| |||||||||||||| Sbjct 34860874 CCACCTCAAGCGTGATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 34860925 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| |||||||| ||||| | | |||||| | || || ||||||||||| ||||| Sbjct 16418774 CTCCTTTTGAATGTTGTAGTCTGCTAAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 16418833 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||| ||||||| || | || || ||||| ||| || |||| ||| Sbjct 16418834 GATGAGACGCTGCTGGTCCGGAGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTC-ACGT 16418892 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | ||||||| ||||||||||| || || || || || || || ||||| | Sbjct 16418893 TATCAATAGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTGCCGGTAAGAGTCTTCA 16418952 Query 41850 CGAAAATCTGCATG 41863 |||| ||||||||| Sbjct 16418953 CGAAGATCTGCATG 16418966 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || ||||| ||||||||||| | | || || | || || ||||| ||||| ||||| Sbjct 11141369 TCTTTCTGGATGTTATAGTCAGCCAAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAG 11141428 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || || ||||| ||||||| |||| | ||| |||||| || |||| |||| ||| Sbjct 11141429 ATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCC-TGGATTTTGGCTTTCACGTT 11141487 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | |||||| ||||||||| | || ||||| || || || | ||||| || Sbjct 11141488 GTCAATGGTGTCGGAACTCTCCACCTCTAGAGTGATCGTCTTTCCTGTTAAAGTCTTCAC 11141547 Query 41851 GAAAATCTGCATG 41863 ||| || |||||| Sbjct 11141548 GAAGATTTGCATG 11141560 >seq5 Length=46902585 Score = 114 bits (126), Expect = 1e-20 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || ||||| | | || ||||| || || ||||||||| ||||| || || | Sbjct 33724868 GCCACCACGTAGCCTGAGGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGC 33724809 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | |||| ||||||||||| |||||||| || || | ||| || |||| || Sbjct 33724808 TAGGGTTCTCCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGG 33724749 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 || | |||||||| | ||| | || |||| ||| | | | ||||| ||| | Sbjct 33724748 AATACCCTCCTTGT-CTTGAATCTTGGCTTTAACATTGTCGATCGTGTCAGAGCT---TT 33724693 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| | || ||||| || ||||| || ||||| ||||| |||||||| Sbjct 33724692 CCACCTCAAGGGTGATCGTCTTTCCCGTGAGTGTCTTAACGAAGATCTGCAT 33724641 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||||||||| ||||| || || ||||||||||||||| || |||| Sbjct 33725096 GCCTCCACGCAGACGTAACACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCGGC 33725037 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || || | || || |||||||||||||| || |||| ||||| ||||| | || Sbjct 33725036 CAATGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGCGG 33724977 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||| | || | || || | ||| | | |||||| ||||| Sbjct 33724976 GATTCCCTCCTTGT-CTTGTATCTTGGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCA 33724918 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || |||||||| ||||| | ||||| || || ||||||||| Sbjct 33724917 CCTCGAGTGTGATCGTTTTTCCCGTTAAGGTCTTGACAAAGATCTGCATG 33724868 >seq1 Length=43764888 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| ||||||||||||||| || || | Sbjct 35467693 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCT 35467634 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||||||||| || ||||| || || ||||| ||||||| || Sbjct 35467633 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 35467574 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | || | || || | ||| | | | |||||| |||||| Sbjct 35467573 ATGCCTTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCAC 35467515 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || |||| ||||| || ||||||||||| Sbjct 35467514 CTCCAGTGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAAATCTGCAT 35467467 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||||||| | |||| || || || |||||||| ||||| || || | Sbjct 35467010 GCCTCCACGTAGACGCAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCTGC 35466951 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || ||||||||||| || || || |||| | ||| ||||| | || Sbjct 35466950 CAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGG 35466891 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||| |||| | || | || |||| || | | | ||||||| || | Sbjct 35466890 GATACCCTCTTTGT-CTTGGATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCAA 35466832 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || ||||| || ||||||| |||||| ||||| || ||||| Sbjct 35466831 CCTCCAAAGTGATCGTCTTTCCCGTCAACGTCTTAACGAATATTTGCAT 35466783 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || ||||| ||||||||||||||| || |||| | ||| | | || || Sbjct 35467219 ACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTGCCATCTTCC 35467160 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | ||||| || || || || || | ||| ||||| | |||| | |||||||||| || Sbjct 35467159 AATTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCC-TG 35467101 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 |||| |||| || | | | |||||| ||||||||| | ||| ||||| || Sbjct 35467100 GATTTTGGCTTTCACATTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTCTT 35467041 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || |||| ||||| ||||| || |||||| Sbjct 35467040 TCCTGTCAAAGTCTTGACGAAGATTTGCATG 35467010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462113958383200