Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 118 2e-21 seq2 102 2e-16 seq10 98.7 2e-15 seq9 98.7 2e-15 seq8 98.7 2e-15 seq5 98.7 2e-15 seq4 98.7 2e-15 seq3 98.7 2e-15 seq1 98.7 2e-15 seq7 95.1 3e-14 >seq6 Length=26286742 Score = 118 bits (130), Expect = 2e-21 Identities = 567/884 (64%), Gaps = 27/884 (3%) Strand=Plus/Plus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| |||||| ||||| || || | || ||||| |||||||||||||| | ||| Sbjct 22599079 TCTGCATGTTCCCGATCCACTAACCGCAGATCTGGGAGATGTACAAGAAGGCCGAGGCCT 22599138 Query 229811 CTTTCTGGACCACTGAGGAAGTTCCTCTGAACGC-AGAC-GTCGTCGACTGGCGTGAGAA 229868 ||||||||||| | || ||||| ||| ||| |||| ||| ||||||| ||||| Sbjct 22599139 CTTTCTGGACCGCCGAAGAAGTCGATCT-CTCGCAAGACACTCG-CGACTGG---GAGAA 22599193 Query 229869 ACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGA 229928 ||||| |||| || || || |||||||||||| |||| | || ||||| | |||||| Sbjct 22599194 TCTCAACGACGGAGAGCGCCACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCCGA 22599253 Query 229929 TGGTATTGTGATGGAAAATCTGCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAGG 229987 || || || | || ||||| || || | ||| || || || | |||| Sbjct 22599254 CGGAATCGTTTTAGAGAATCTCGCCTCCCGGTTCA-TGTCCGACGTGCAAGTCTCCGAGG 22599312 Query 229988 CACGGCAATTTTATGCTTACCAAA----CATTCAACGAATCTATCCATTCTGAACAATAT 230043 | || || || | | ||| | ||| | ||| |||||| || || || Sbjct 22599313 CGCGTGCCTTCTACGGGTTCCAGATCGCGATTGA--GAA--TATCCACTCAGAGATGTAC 22599368 Query 230044 GCTCTGCTTATCGACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGATGCC 230103 || || ||||| || || ||| | |||| || || | || || || Sbjct 22599369 AGCCTCCTGCTCGACACGTACATCAAGGACAACAAAGAGAGGGACCACCTCTTCCGCGCG 22599428 Query 230104 ATTGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACCT 230163 ||||||| |||||| || || ||||| | ||||| ||| ||| | || Sbjct 22599429 ATTGAAACCATCCCTTGCGTCGCGAAGAAGGCCCAATGGGCCATGAAGTGGATCGACGGA 22599488 Query 230164 GGTAAATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCC 230223 | | | || |||||| | |||| || | | || || ||||| || | || ||| Sbjct 22599489 TCTCAGACTTTCGCCGAGAGGATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCC 22599548 Query 230224 GGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTG 230283 || || |||||| ||||||| |||||| ||| ||| | ||||| || | | Sbjct 22599549 GGAAGCTTCTGCTCCATCTTCTGGCTGAAGAAGCGAGGGCTCATGCCGGGTTTAACCTTC 22599608 Query 230284 TCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTAT 230343 || |||||||| ||| ||| ||||| || || || | |||| | || || ||| Sbjct 22599609 TCCAACGAGTTGATCTCTCGAGACGAAGGCCTTCACTGCGACTTCGCCTGCCTGATCTAT 22599668 Query 230344 --TCAAAGCTCCAGAAC-AAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCA 230400 || | | || || ||||| | ||| || || || | || || Sbjct 22599669 ACTCTA---TTGAGGACGAAGCTCACGGAGGAGCGCGTGAAGTCGATTGTCTGCGACGCG 22599725 Query 230401 GTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTT-ATTGGCATGAA 230459 || || | ||| | |||||| | || ||||| |||| || ||| || | || ||||| Sbjct 22599726 GTGGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTG-CGCGTTGGTGGGGATGAA 22599784 Query 230460 CGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGG 230519 | ||| | ||| | ||||| || || || || || || | |||| | || ||||| Sbjct 22599785 CCGTGATTTGATGAGTCAGTATATTGAGTTTGTGGCGGATAGGCTTTTGGGCGCGCTTGG 22599844 Query 230520 TTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCA 230579 || | ||| |||||| ||| || |||| | |||||| | ||||||||||| Sbjct 22599845 GTAGGGGAAGGTGTACGGTGTGGCGAATCCGTTTGATTGGATGGAGTTGATTTCGCTTCA 22599904 Query 230580 AGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 ||||| || |||||||| || ||| | || | || || |||| Sbjct 22599905 GGGGAAAACGAACTTCTTTGAGAAGAGAGTTGGGGATTACCAGA 22599948 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 6225703 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6225644 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6225643 CCCACGGTGGGC 6225632 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 8093966 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8094025 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 8094026 CCCACGGTGGGC 8094037 >seq2 Length=27864329 Score = 102 bits (112), Expect = 2e-16 Identities = 147/202 (73%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| |||||| ||||| || || | || ||||| ||||||||||| || | || Sbjct 22153002 TCTGCATGTTCCCGATCCACTACCCTCAGATCTGGGAGATGTACAAGAAAGCCGAAGCCT 22153061 Query 229811 CTTTCTGGACCACTGAGGAAGTT--CCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAA 229868 | ||||||||| | |||||||| ||||| | |||| | ||||||| | || | Sbjct 22153062 CCTTCTGGACCGCCGAGGAAGTCGACCTCTC--CCAAGACACCCGCGACTGG-GAGACCA 22153118 Query 229869 AC-TCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCG 229927 || |||| |||| ||| || || |||||||||||| |||| | || ||||| | ||||| Sbjct 22153119 ACCTCAACGACGGCGAGCGCCACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCCG 22153178 Query 229928 ATGGTATTGTGATGGAAAATCT 229949 | || || || | || ||||| Sbjct 22153179 ACGGAATCGTCCTCGAGAATCT 22153200 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 23413206 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 23413265 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 23413266 CCCCACGGTGGGC 23413278 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 1656575 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1656516 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1656515 CCCACGGTGGGC 1656504 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 16633888 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16633829 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 16633828 CCCACGGTGGGC 16633817 >seq10 Length=17599535 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4132494 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4132435 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4132434 CCCACGGTGGGC 4132423 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 13833871 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13833812 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13833811 CCCACGGTGGGC 13833800 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 17374885 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 17374944 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 17374945 CCCACGGTGGGC 17374956 >seq9 Length=37155481 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 1116681 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1116622 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1116621 CCCACGGTGGGC 1116610 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 18089041 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 18088982 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 18088981 CCCACGGTGGGC 18088970 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 29839418 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 29839359 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 29839358 CCCACGGTGGGC 29839347 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 33471417 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 33471476 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 33471477 CCCACGGTGGGC 33471488 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 36769244 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 36769185 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 36769184 CCCACGGTGGGC 36769173 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 2240427 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2240486 Query 165769 CCCCACGATGGGC 165781 ||||| | ||||| Sbjct 2240487 CCCCATGGTGGGC 2240499 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/65 (89%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 165258 CCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCACCGGTTCGAACCCG 165317 |||||||||||| | |||||| |||||||| |||||||||||||||||||||||||| Sbjct 6081150 CCATAGCTCAGTGG--TAGAGCATTCGACTGCAGATCGAGAGGTCACCGGTTCGAACCCG 6081093 Query 165318 GTTGG 165322 ||||| Sbjct 6081092 GTTGG 6081088 >seq8 Length=21613650 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 6824226 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6824285 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6824286 CCCACGGTGGGC 6824297 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 18647758 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 18647699 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 18647698 CCCACGGTGGGC 18647687 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 19419745 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 19419804 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 19419805 CCCACGGTGGGC 19419816 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 21537925 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 21537866 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 21537865 CCCACGGTGGGC 21537854 Score = 95.1 bits (104), Expect = 3e-14 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 |||||||||||||| |||||||||| || || |||| || |||||||||||||||||||| Sbjct 14678891 CCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCC 14678950 Query 165772 CACGATGGGC 165781 |||| ||||| Sbjct 14678951 CACGGTGGGC 14678960 >seq5 Length=23960834 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2412976 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2413035 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2413036 CCCACGGTGGGC 2413047 >seq4 Length=18984343 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 18548845 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 18548904 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 18548905 CCCACGGTGGGC 18548916 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||| | || || |||| || |||||||||||||||| | Sbjct 817879 GCCCGTCTAGCTCAGTTGGTAGAGCTCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAC 817938 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 817939 CCCACGGTGGGC 817950 >seq3 Length=31725688 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 282213 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 282154 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 282153 CCCACGGTGGGC 282142 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 22373667 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22373726 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22373727 CCCACGGTGGGC 22373738 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 24712337 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 24712278 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 24712277 CCCACGGTGGGC 24712266 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 24734874 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 24734933 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 24734934 CCCACGGTGGGC 24734945 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 25969530 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 25969471 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 25969470 CCCACGGTGGGC 25969459 >seq1 Length=28635137 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 6815885 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6815826 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6815825 CCCACGGTGGGC 6815814 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 6851989 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6852048 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6852049 CCCACGGTGGGC 6852060 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 8335198 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8335139 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 8335138 CCCACGGTGGGC 8335127 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 11502297 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 11502238 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 11502237 CCCACGGTGGGC 11502226 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 27952471 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 27952412 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 27952411 CCCACGGTGGGC 27952400 >seq7 Length=22597724 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 9239098 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGA 9239039 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9239038 CCCACGGTGGGC 9239027 Score = 93.3 bits (102), Expect = 9e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTG-G 230453 || || || || | ||| | |||||| | || ||||| |||| ||| || || || | Sbjct 8977934 GACGCGGTCGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGT-GCGTTGGTGTG 8977992 Query 230454 CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGC 230513 |||| | ||| || ||| | ||||| ||||| ||||| | || | |||| | ||| Sbjct 8977993 GATGACCCGTGAGCTGATGAGTCAGTATATCGAGTTCGTGGTGGATAGGCTTTTGGGTGC 8978052 Query 230514 ACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTC 230573 ||||| || | ||| |||||| ||| || |||| | |||||| | ||| Sbjct 8978053 GCTTGGGTATGGGAAGGTGTACGGTGTGGCGAATCCGTTTGATTGGATGGAGTTGATTCT 8978112 Query 230574 GCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 |||||| ||||| || ||||||||||| ||| | || ||||||| |||| Sbjct 8978113 GCTTCAGGGGAAAACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGA 8978162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057278490410870