Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 seq3 109 5e-19 seq10 107 2e-18 seq9 107 2e-18 seq7 104 2e-17 seq8 98.7 8e-16 seq1 98.7 8e-16 seq23325 91.5 1e-13 seq5 84.2 2e-11 seq4 82.4 6e-11 >seq6 Length=26286742 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | ||| |||||||| || ||||| ||||||||| Sbjct 15796954 CCACCACGGAGCCTGAGGACGAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 15796895 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| ||||||||||| || | || || | ||||||||| || Sbjct 15796894 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 15796835 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | | | ||| || | |||| Sbjct 15796834 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACC 15796775 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| || || || || || || ||||| Sbjct 15796774 TCAAGCGTGATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 15796728 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||| ||||||| || | ||| |||||||| || ||||| ||||||||| Sbjct 15797638 CCACCACGAAGCCTTAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 15797579 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| ||||||||||| || | || || | ||||||||| || Sbjct 15797578 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 15797519 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | | ||| || ||| Sbjct 15797518 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACTTTATCAATAGTGTCCGAACTCTCAACC 15797459 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||||||||| | || || |||||||| ||||| Sbjct 15797458 TCCAATGTGATGGTCTTGCCGGTAAGGGTCTTCACAAATATCTGCAT 15797412 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | ||| |||||||| || ||||| ||||| || Sbjct 15797182 CCACCACGGAGCCTGAGGACGAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCA 15797123 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||| ||||| ||| | || || |||||||||||| || Sbjct 15797122 AGAGTCCTTCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 15797063 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| || || | | | ||| ||| | |||| Sbjct 15797062 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCCACC 15797003 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| ||||| || || || || |||||||| |||||||| Sbjct 15797002 TCCAAAGTAATCGTCTTCCCCGTCAAAGTCTTGACAAAAATTTGCAT 15796956 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||||||||||| || ||||| ||||| || Sbjct 15797866 CCACCACGGAGACGGAGGACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCT 15797807 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | |||||||||| || Sbjct 15797806 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 15797747 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | | | ||| || | |||| Sbjct 15797746 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACC 15797687 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| || || || || || || ||||| Sbjct 15797686 TCAAGCGTGATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 15797640 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||| ||||||| || | ||| |||||||| || ||||| ||||||||| Sbjct 15796726 CCACCACGAAGCCTTAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 15796667 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| ||||||||||| || | || || ||||||||||| || Sbjct 15796666 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGA 15796607 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || || ||||| ||| || |||||| | | | | || || |||| Sbjct 15796606 ATACCCTCTTTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 15796547 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || ||||| || || || || || ||||| Sbjct 15796546 TCTAGCGTGATCGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 15796500 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| ||||| || |||||||| ||||| || || || | |||||| Sbjct 15797392 ACCAAGTGGAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCTAGAGTCCTTCCATCCTCC 15797333 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||| ||||| ||| | || | |||||||||||| || | || ||||| || Sbjct 15797332 AACTGCTTGCCGGCAAATATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGA 15797273 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 ||||| || || | | | ||| ||| | |||| |||| ||||| ||||| Sbjct 15797272 ATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCCAAAGTAATCGTCTTC 15797213 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || || |||||||| |||||||| Sbjct 15797212 CCCGTCAAAGTCTTGACAAAAATTTGCAT 15797184 >seq3 Length=31725688 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||||||||| || ||||| ||||| || Sbjct 11141094 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCG 11141035 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| || || || | || |||| |||||||||| || Sbjct 11141034 AGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 11140975 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || ||| | Sbjct 11140974 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACT 11140915 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || || | ||||| || || || ||||| || Sbjct 11140914 TCGAGGGTGATTGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATCTT 11140865 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||||||||||| || ||||| ||||| ||| Sbjct 13311654 CCTCCACGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCC 13311595 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | |||||||||| || Sbjct 13311594 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 13311535 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | | | || || | |||| Sbjct 13311534 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACC 13311475 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| || || || || || || ||||| Sbjct 13311474 TCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCAT 13311428 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| || | ||| || || || || ||||||||||| ||| Sbjct 13311426 CCACCACGGAGCCTGAGCACCAGGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCC 13311367 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||| ||||||||||| || | || || ||||||||||| || Sbjct 13311366 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGA 13311307 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || || ||||| ||| || |||||| | | | | || || |||| Sbjct 13311306 ATACCCTCTTTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 13311247 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || ||||| || || || || || ||||| Sbjct 13311246 TCTAGCGTGATCGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 13311200 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| ||||| || |||||||| || ||||||| ||| | | || ||| Sbjct 13311180 ACCAAGTGAAGAGTTGACTCTTTCTGAATGTTGTAATCCGCCAAGGTGCGACCATCTTCC 13311121 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||| || || ||| | || | |||||||||||| || | || ||||| || | Sbjct 13311120 AACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGG 13311061 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 ||||| || || | | | | ||| ||| | ||| |||| || || ||||| Sbjct 13311060 ATCTTGGCCTTAACATTGTCAATAGTGTCAGAGCTCTCAACCTCCAAAGTGATAGTCTTT 13311001 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || |||||||| || ||||| Sbjct 13311000 CCGGTCAAGGTCTTGACAAAGATCTGCAT 13310972 >seq10 Length=17599535 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| ||||| ||||| ||||| || || | | ||||| |||||||| || Sbjct 17168561 GTAGACTCCTTCTGAATATTATAATCCGCAAGCGTACGACCATCCTCAAGCTGTTTCCCA 17168502 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || |||||||||||||| || | |||||||||||| |||||| ||| Sbjct 17168501 GCGAAGATGAGTCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCTTTGCTTTG 17168442 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || ||| | ||| |||| |||||| || || ||||| || || Sbjct 17168441 ACGTTGTCAATCGTGTCAGAGCTCTCAACCTCCAAGGTAATTGTTTTACCGGTCAAGGTC 17168382 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 17168381 TTGACAAAGATCTGCAT 17168365 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | | ||| | || | ||| |||||||| || ||||| || || | Sbjct 17168821 TTCCACCACGAAGACGCAACACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAG 17168762 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | ||||| |||||||| || || | || |||||||| |||||| | Sbjct 17168761 CCAAAGTCCTACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAG 17168702 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||||| ||||| | | | | || || | ||| Sbjct 17168701 GAATCCCTTCCTTGTCCTGAATCTTAGCCTTCACGTTGTCTATCGTGTCTGAGCTCTCAA 17168642 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| ||| || |||||||| || || || || ||||||||||||||| Sbjct 17168641 CTTCCAAGGTTATAGTCTTGCCTGTCAAAGTCTTCACAAATATTTGCATT 17168592 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| |||||||| || || || || || || || || | | ||||| ||||| || || Sbjct 17168106 AGTAGACTCCTTCTGGATATTGTAATCAGCGAGTGTGCGTCCATCCTCTAGCTGCTTACC 17168047 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | ||||| |||||||||||| || | ||||||||||| |||||| || Sbjct 17168046 GGCGAAGATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTT 17167987 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | ||| || ||| | ||| || | ||||||||||||||||| | ||| Sbjct 17167986 GACGTTATCGATGGTGTCAGAGCTCTCGACCTCGAGAGTAATGGTCTTGCCGGTGAGCGT 17167927 Query 21158 TTTGACAAATATTTGCAT 21175 ||| || || |||||||| Sbjct 17167926 TTTCACGAAAATTTGCAT 17167909 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| |||||||| || || || || || || || || | | ||||| ||||| || || Sbjct 17168334 AGTAGACTCCTTCTGGATATTGTAATCAGCGAGTGTGCGTCCATCCTCTAGCTGCTTACC 17168275 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | ||||| |||||||||||| || | ||||||||||| |||||| || Sbjct 17168274 GGCGAAGATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTT 17168215 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | | | ||| || | ||| || | ||| ||||||||||| || || || Sbjct 17168214 GACGTTGTCAATAGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAAGT 17168155 Query 21158 TTTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 17168154 CTTGACAAAGATCTGCAT 17168137 >seq9 Length=37155481 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| |||||||| |||||||||||||| |||| ||| | | ||||| Sbjct 16960719 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCCAAGGTACGACCATCCTCG 16960778 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 ||||| ||||| ||| | || | |||||||| ||| || | || |||||||| | Sbjct 16960779 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTGTCCTGG 16960838 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 ||||| || || | | | | |||||| |||| |||| ||||| ||||| Sbjct 16960839 ATCTTAGCCTTGACGTTGTCAATAGTATCTGAACTCTCCACCTCCAAAGTAATAGTCTTT 16960898 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| || || || || |||||||| Sbjct 16960899 CCGGTTAATGTCTTAACGAAGATTTGCAT 16960927 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| ||| | ||| |||||||| |||||||| ||||| ||| Sbjct 16984244 CCACCACGCAGACGTAACACCAAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 16984303 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| ||||| ||| | || | ||||||||||| || Sbjct 16984304 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGA 16984363 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | | || || |||| Sbjct 16984364 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCAATGGTGTCGGAACTCTCCACC 16984423 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||| ||||| | || |||||||| || ||||| Sbjct 16984424 TCTAGAGTAATGGTCTTACCGGTAAGAGTCTTGACAAAGATCTGCAT 16984470 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| ||||||||||||||||| ||||| || Sbjct 16960929 CCGCCACGGAGCCTGAGGACGAGATGCAAAGTTGACTCCTTTTGAATGTTGTAGTCAGCG 16960988 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || || ||||| || || ||| | || | ||| ||||| ||| || Sbjct 16960989 AGGGTACGCCCATCTTCAAGCTGCTTACCGGCAAAGATCAATCTTTGCTGATCCTGAGGA 16961048 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| || || ||||| ||| || | | ||| |||||| | |||| Sbjct 16961049 ATACCTTCTTTATCCTGAATCTTGGCTTTAACGTTGTCGATGGTATCAGAGCTCTCCACC 16961108 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| || || | || || || || || ||||| Sbjct 16961109 TCCAAAGTGATCGTCTTCCCTGTCAGTGTCTTAACGAAGATCTGCAT 16961155 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| |||||||| |||||||||||||| |||| ||| | | ||||| Sbjct 16960491 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCCAAGGTACGACCATCCTCG 16960550 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 ||||| ||||| ||| | || | | |||||||||| || | |||||| ||||| | Sbjct 16960551 AGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCTTGG 16960610 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 || || |||||| | | | | || || |||| || | ||||||||||| Sbjct 16960611 ATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTAATGGTCTTC 16960670 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| | || |||||||| || ||||| Sbjct 16960671 CCGGTCAGTGTCTTGACAAAGATCTGCAT 16960699 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | || ||||| || || ||||| ||||| || ||||| | | ||| Sbjct 16960260 AGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCTAGGGTGCGACCATCC 16960319 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| ||| | || | | |||||||||| || | |||||| ||||| Sbjct 16960320 TCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCT 16960379 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| || |||||| | | | | || || |||| || | ||||||||| Sbjct 16960380 TGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTAATGGTC 16960439 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | || |||||||| || ||||| Sbjct 16960440 TTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960471 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || | ||| | ||| |||| || | ||| |||||||| || ||||| || ||||| Sbjct 24150851 TCCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 24150910 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || |||| |||||||| || || || | || || | |||||||||| || Sbjct 24150911 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 24150970 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| ||||| ||||| | | ||| || || | || Sbjct 24150971 GATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 24151030 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| ||||| || |||||||| Sbjct 24151031 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 24151081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 ||| || | ||| | || |||||||| || |||| ||||| || || || | |||| Sbjct 30362457 GAGGACGAGATGAAGCGTCGACTCCTTCTGGGTGTTGTAGTCGGCGAGCGTGCGTCCGTC 30362398 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| || || || |||| |||| ||||||||| || | |||||||||||| Sbjct 30362397 TTCCAGCTGCTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 30362338 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| || || | | ||| || || || ||| || | ||| || || Sbjct 30362337 CTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGT 30362278 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || || || | ||||| ||||| || ||||| || Sbjct 30362277 TTTTCCCGTAAGGGTTTTCACAAAGATCTGCATCTT 30362242 >seq7 Length=22597724 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| ||||| || Sbjct 13483627 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 13483568 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || |||| || |||||||| || || | || |||| |||||||||| || Sbjct 13483567 AGGGTACGGCCGTCTTCGAGCTGTTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGAGGG 13483508 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || ||| Sbjct 13483507 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 13483448 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| |||||||| || || | ||||| || || || ||||| || Sbjct 13483447 TCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATCTT 13483398 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||| | |||||||| || | || |||||||| || ||||| |||||||| Sbjct 8143598 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 8143657 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || |||| |||||||| || || || | || || | |||||||||| || Sbjct 8143658 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 8143717 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| ||||| ||||| | | ||| || || | || Sbjct 8143718 GATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 8143777 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| ||||| || |||||||| Sbjct 8143778 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 8143828 >seq8 Length=21613650 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | ||| |||||||| || ||||| ||||| ||| Sbjct 12585246 CCTCCACGCAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 12585187 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| |||| || ||||| ||||| || | || | |||||||||||| || Sbjct 12585186 AGAGTTCTACCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 12585127 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| |||||| | | ||| || || ||| Sbjct 12585126 ATCCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTGTCGATTGTGTCGGAACTCTCGACC 12585067 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| ||||| || || ||||| || || ||||| Sbjct 12585066 TCAAGGGTGATCGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 12585020 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | || ||||||||||||||||| ||||| || ||||| | | ||||| Sbjct 12585457 CACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCATCCTC 12585398 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 ||||| || || || | || || | ||||||||| || | | |||||||||| Sbjct 12585397 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGTCTTCCTTGTCTTG 12585338 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| || || | | | || || | |||| |||| || |||||||| Sbjct 12585337 GATCTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGATGGTCTT 12585278 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | |||||||| || ||||| Sbjct 12585277 TCCGGTTAAGTTCTTGACAAAGATCTGCAT 12585248 >seq1 Length=28635137 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | ||| |||||||| || ||||| ||||| || Sbjct 22221876 CCACCACGGAGCCTGAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 22221935 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||||| ||| ||||| ||| | || || |||||||||||| || Sbjct 22221936 AGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 22221995 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || |||||| || || | | ||| ||||| | || Sbjct 22221996 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTATCGGAGCTTTCAACC 22222055 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| | ||||| ||||| || ||||| Sbjct 22222056 TCCAAAGTGATCGTCTTTCCGGTCAGAGTTTTAACAAAGATCTGCAT 22222102 >seq23325 Length=170 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| |||| || | || |||||||| || ||||| |||||||| Sbjct 20 CCACCACGAAGCCTGAGTACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGCA 79 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| || || ||| | || || | |||||||||| || Sbjct 80 AGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGA 139 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | |||||||||||| |||||| Sbjct 140 ATGCCTTCCTTGTCCTGGATCTT 162 >seq5 Length=23960834 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | || |||||||| || ||||| ||||| || ||||| | | ||||| Sbjct 16975513 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCATCCTC 16975454 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 ||||| || || || | || || | ||||||||| || | |||||||||||| Sbjct 16975453 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTG 16975394 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG-TTTCCACGGTAATGGTC 21143 |||||| || || | | | || | ||| |||| || |||| || |||||| Sbjct 16975393 GATCTTGGCCTTGACGTTATCAATCGTGT--CCGAGCTCTCGACCTCCAGTGTGATGGTC 16975336 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || || || |||||||| |||||||| Sbjct 16975335 TTACCAGTCAAGGTCTTGACAAAGATTTGCAT 16975304 >seq4 Length=18984343 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| ||||||| ||||| || || Sbjct 357496 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTCCCGTCCTCGAGCTGCTTCCCG 357555 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| || | |||||||||||| |||||| || Sbjct 357556 GCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 357615 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| || | ||| || || || || |||| ||| Sbjct 357616 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTACCCGTTAGGGTT 357675 Query 21159 TTGACAAATATTTGCATTTT 21178 || || || || ||||| || Sbjct 357676 TTCACGAAGATCTGCATCTT 357695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422052067215284