Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq9 122 6e-23 seq3 114 8e-21 seq7 113 3e-20 seq1 109 4e-19 seq4 104 2e-17 seq6 100 2e-16 seq8 84.2 1e-11 seq5 82.4 5e-11 >seq9 Length=37155481 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||| ||| || |||| |||| |||||| || |||||| Sbjct 30362435 TCCTTCTGGGTGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCCAGCTGCTTCCCGGCGAAA 30362376 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | || |||||||| ||||| ||| | || | Sbjct 30362375 ATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 30362316 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || ||||| || | ||||| ||||| || || || ||||||||| Sbjct 30362315 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGTAAGGGTTTTCACA 30362256 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 30362255 AAGATCTGCATC 30362244 Score = 107 bits (118), Expect = 1e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| | || |||||||| | ||| || ||||| |||||||| || | Sbjct 24150851 TCCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 24150910 Query 34222 CAGCTGACGGTC-GTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACG 34279 || || | || ||| |||| |||||| || ||||| || || |||||||||| || || Sbjct 24150911 GAG-TGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCG 24150969 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | |||||||| ||||| ||| | || | | |||| |||| |||||| Sbjct 24150970 GG-ATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCG 24151028 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | || || || || || || || |||||||||||||||||||| Sbjct 24151029 ACCTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 24151078 Score = 95.1 bits (104), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| ||||||||||| | ||| |||| | || || | ||| || || ||||| | Sbjct 26352610 CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGA 26352551 Query 34260 TGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 | | |||||||| || || || || ||| ||||| ||||| ||| | || Sbjct 26352550 TCAATCGCTGCTGATCCGGAGGGATACCTTCT--TTGTCTTGGATCTTGGCCTTGACATT 26352493 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| || ||||| || | |||||||| || ||||| || |||||||| Sbjct 26352492 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCAC 26352433 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 26352432 GAAGATCTGCATC 26352420 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||| ||| | |||| || ||||| || ||||| || | Sbjct 16984472 CCTCCACGCAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCG 16984531 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | |||| || | |||||| || || || || | |||||||||||| || Sbjct 16984532 AGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGA 16984591 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| |||||| | | | || | |||| || || Sbjct 16984592 ATACCCTCCTTGTCTTGGATCTTA-GCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCAC 16984650 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || ||||||||||| || |||||||||||||| Sbjct 16984651 CTCGAGCGTGATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 >seq3 Length=31725688 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| ||||||||||||| Sbjct 11141094 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCG 11141035 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| |||||| || ||||| || || ||||||||||| || Sbjct 11141034 AGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 11140975 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | || | | || | |||| || ||||| Sbjct 11140974 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACT 11140915 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || ||||| |||||||| |||||||||||| Sbjct 11140914 TCGAGGGTGATTGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATC 11140867 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | ||| || ||||| ||||||||||| | | Sbjct 13310970 CCACCACGAAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCC 13310911 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | |||| |||||||||||||| ||||| || |||| |||||| || || Sbjct 13310910 AAGGTTCTCCCGTCTTCCAACTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGG 13310851 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | | | | || | |||| || || Sbjct 13310850 ATTCCCTCCTTATCCTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCACC 13310791 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || ||||||||||||||||| |||||||||||| Sbjct 13310790 TCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATC 13310743 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||||||| | ||| ||||||||| ||||| ||||| | | Sbjct 13311426 CCACCACGGAGCCTGAGCACCAGGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCC 13311367 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||| ||||| ||||| || |||| ||||||||| || Sbjct 13311366 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGA 13311307 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||| ||||| || ||| ||||| | | | | || | |||| || || Sbjct 13311306 ATACCCTCTTTGTCCTGGAT-TTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCAC 13311248 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || || || | ||| ||||| ||||||||||| Sbjct 13311247 CTCTAGCGTGATCGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 13311200 >seq7 Length=22597724 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || |||| |||| || | ||| || || ||||| Sbjct 13483591 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCGAGCTGTTTCCCGGCGAAG 13483532 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| || | || |||||||| ||||| ||| | | | Sbjct 13483531 ATGAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 13483472 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || ||||| || | |||||||| || || ||||| |||||||| Sbjct 13483471 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCACG 13483412 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 13483411 AAGATCTGCATC 13483400 Score = 107 bits (118), Expect = 1e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| | ||||||| ||| | || || ||||| ||||||||||| | Sbjct 8143598 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 8143657 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACG 34279 ||| | |||| |||| |||||| || ||||| || || ||||||||||| || | Sbjct 8143658 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 8143717 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 | || || |||||||| ||||| ||| | || | | |||| |||| |||||| Sbjct 8143718 GATAC-CT-TCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCG 8143775 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | || || || || || || || |||||||||||||||||||| Sbjct 8143776 ACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 8143825 >seq1 Length=28635137 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | ||| || ||||| ||||||||||||| Sbjct 22221876 CCACCACGGAGCCTGAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 22221935 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | || |||||||||||||| || || ||||||| ||||||||| || Sbjct 22221936 AGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 22221995 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | | | | || | ||||| ||| || Sbjct 22221996 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTATCGGAGCTTTCAACC 22222055 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| ||||| || || ||||| |||||||| ||||||||||||||| Sbjct 22222056 TCCAAAGTGATCGTCTTTCCGGTCAGAGTTTTAACAAAGATCTGCATC 22222103 >seq4 Length=18984343 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||||| Sbjct 357466 CCACCGCGGAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 357525 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || | |||| || | |||||| || ||||| || ||||||||||||| || |||| Sbjct 357526 AGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGG 357585 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 357586 -ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 357644 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| ||||| || || || |||||||| |||||||||||| Sbjct 357645 CTCGAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATC 357693 >seq6 Length=26286742 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || |||||||| | ||| || ||||| || ||||| || | | Sbjct 15796498 CCTCCACGTAGACGCAAGACCAGGTGAAGCGTAGACTCCTTCTGGATATTGTAATCAGCC 15796439 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | |||| ||||||||||| || ||||| ||||||| |||||| || || Sbjct 15796438 AAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGA 15796379 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| |||||| | | | || | || | ||| || Sbjct 15796378 ATGCCTTCCTTGTCCTGAATCTTG-GCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCAC 15796320 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || |||||||| ||||||||||||||||||||| Sbjct 15796319 CTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCATC 15796271 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | |||| || ||||| ||||||||||| | | Sbjct 15796726 CCACCACGAAGCCTTAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 15796667 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||| ||||| ||||| || |||| ||||||||| || Sbjct 15796666 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGA 15796607 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||| ||||| || ||| ||||| | | | | || | |||| || || Sbjct 15796606 ATACCCTCTTTGTCCTGGAT-TTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCAC 15796548 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || || || | ||| ||||| ||||||||||| Sbjct 15796547 CTCTAGCGTGATCGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 15796500 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | |||| || ||||| ||||||||||| | | Sbjct 15796954 CCACCACGGAGCCTGAGGACGAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 15796895 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||| ||||| ||||| ||||| ||||||||||| || Sbjct 15796894 AAAGTACGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 15796835 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || || Sbjct 15796834 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACC 15796775 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || |||||||| | || || || || |||||||| Sbjct 15796774 TCAAGCGTGATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 15796728 >seq8 Length=21613650 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||||| ||| | | || | || ||||| ||||||||||| | Sbjct 12585018 CCTCCACGAAGACGCAACACCAAGTGGAGATTAGTCTCCTTCTGGATGTTGTAGTCAGCG 12584959 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | |||| || | |||||| || ||||| || | || |||||| || ||| Sbjct 12584958 AGAGTTCTACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGGGA 12584899 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||| || ||| || ||||| | | | | || | |||| ||| || Sbjct 12584898 ATGCCTTCCTTATCCTGGATC-TTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCCAC 12584840 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCG 34391 || | ||||| || || ||||||||||| || || ||||||||||||| Sbjct 12584839 CTCGAGGGTGATCGTCTTCCCGGTGAGAGTCTTAACGAAGATCTGCATCG 12584790 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || ||||| ||| | |||| || ||||| ||||||||||| | | Sbjct 12585246 CCTCCACGCAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 12585187 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || | |||| || | ||||||||| ||||| || | || |||||||| || ||| Sbjct 12585186 AGAGTTCTACCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 12585127 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| ||| || ||||| | | | | || | |||| |||| Sbjct 12585126 ATCCCT-TCCTTGTCTTGGATC-TTGGCTTTCACGTTGTCGATTGTGTCGGAACTCTCGA 12585069 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||| || || ||||| | || || || ||||||||||| Sbjct 12585068 CCTCAAGGGTGATCGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 12585020 >seq5 Length=23960834 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | || ||||| ||| | ||| || ||||| |||||||||||| Sbjct 16975533 AAGCCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCG 16975474 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || || | || || | |||||| || ||||| ||||| ||||||||||| Sbjct 16975473 GCTAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGA 16975414 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || |||||||| ||||| ||| | | | |||| || | ||| Sbjct 16975413 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATCGTGTCCGAGCTCTCG 16975354 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||||| || || || | || || |||||||| ||||| Sbjct 16975353 ACCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 16975304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322913521977440