Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 244 9e-60 seq9 122 8e-23 seq5 113 4e-20 seq3 113 4e-20 seq1 113 4e-20 seq7 107 2e-18 seq4 105 6e-18 seq3787 104 2e-17 seq10 102 7e-17 seq8 89.7 5e-13 >seq6 Length=26286742 Score = 244 bits (270), Expect = 9e-60 Identities = 591/884 (67%), Gaps = 13/884 (1%) Strand=Plus/Plus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 ||||| |||||| ||||| | || || | || ||| | |||||||| ||||| || Sbjct 22599075 AGATTCTGCATGTTCCCGATCCACTAACCGCAGATCTGGGAGATGTACAAGAAGGCCGAG 22599134 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 || || || ||||||| ||||||||| || || || | || |||| ||||| Sbjct 22599135 GCCTCTTTCTGGACCGCCGAAGAAGTCGATCTCTCGCAAGACACTCGCGACTGGGAGAAT 22599194 Query 57657 CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 ||||| || ||| | | || || |||||||| | || || |||||||| ||||| Sbjct 22599195 CTCAACGACGGAGAGCGCCACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCCGAC 22599254 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 || || ||| |||||| | | | | || || |||||||| | |||||| Sbjct 22599255 GGAATCGTTTTAGAGAATCTCGCCTCCCGGTTCATGTCCGACGTGCAAGTCTCCGAGGCG 22599314 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 | ||| ||||| || || | || ||||| || | || ||||| ||||| || Sbjct 22599315 CGTGCCTTCTACGGGTTCCAGATCGCGATTGAGAATATCCACTCAGAGATGTACAGCCTC 22599374 Query 57837 CTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAA 57896 || |||| |||||| | ||||||||| | |||| || ||| |||||| ||| Sbjct 22599375 CTGCTCGACACGTACATCAAGGACAACAAAGAGAGGGACCACCTCTTCCGCGCGATTGAA 22599434 Query 57897 ACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCAC 57955 || || || ||| |||| |||||||| | ||| | || || ||||| | | | Sbjct 22599435 ACCATCCCTTGCG-TCGCGAAGAAGGCCCAATGGGCCATGAAGTGGATCGACGGATCTCA 22599493 Query 57956 GGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGG 58015 | || |||||||||||| | | ||||| || ||| ||||| || ||||| || || Sbjct 22599494 G---ACTTTCGCCGAGAGGATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCCGG 22599550 Query 58016 CAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTA 58074 ||||| ||| | || || ||| ||||||| || || || ||||| || | || || Sbjct 22599551 AAGCTTCTGC-TCCATCTTCTGGCTGAAGAAGCGAGGGCTCATGCCGGGTTTAACCTTCT 22599609 Query 58075 GCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACT 58134 |||||||||||| || || ||||| || || || || || || ||||| || || Sbjct 22599610 CCAACGAGTTGATCTCTCGAGACGAAGGCCTTCACTGCGACTTCGCCTGCCTGATCTATA 22599669 Query 58135 CTCACATTG-TCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTC 58193 ||| |||| | || | ||| ||| ||| | | ||| || ||| ||||| Sbjct 22599670 CTC-TATTGAGGACGAAGCTCACGGAGGAGCGCGTGAAGTCGATTGTCTGCGACGCGGTG 22599728 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 | |||||| | |||||||| ||| || || ||| || || | || |||||| | Sbjct 22599729 GAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGGTGGGGATGAACCGT 22599788 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTG 58311 ||||||||| |||| ||||||||||| || || || |||||| || || | | | Sbjct 22599789 GATTTGATGAGTCAGTATATTGAGTTTGTGGCGGATAGGCTTTTGGGCGCGCTTGGGTAG 22599848 Query 58312 GAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGG 58371 | || || ||| | ||||||||||||| ||| | |||| ||||| ||| Sbjct 22599849 GGGAAGGT--GTACGGTGTGGCGAATCCGTTTGATTGGATGGAGTTGATTTCGCTTCAGG 22599906 Query 58372 GCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAA 58415 | || || ||||| || || || | |||| | || || || ||| Sbjct 22599907 GGAAAACGAACTTCTTTGAGAAGAGAGTTGGGGATTACCAGAAA 22599950 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| |||| ||||| |||||||| | || || || || Sbjct 15796727 CATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTC 15796786 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | || || | || |||||||||||| | || || ||||| Sbjct 15796787 CGACACTATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 15796846 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||||||| | || || | ||| || || || || Sbjct 15796847 GCAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAA 15796906 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || || || ||||||||||| || || || || Sbjct 15796907 CATCCAGAAGGAGTCTACTCTTCATCTCGTCCTCAGGCT 15796945 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || |||||| |||| || || ||||| || | || || || || Sbjct 15797183 CATGCAAATTTTTGTCAAGACTTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTC 15797242 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | ||||| | || ||| ||||| || | || || ||||| Sbjct 15797243 TGACACTATTGATAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCA 15797302 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 |||| | | ||||| || ||||| |||||||| || | |||| | ||| || || | Sbjct 15797303 GCAGAGGTTGATATTTGCCGGCAAGCAGTTGGAGGATGGAAGGACTCT-AGCTGACTACA 15797361 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||||| ||||| |||||||| || |||| Sbjct 15797362 ACATTCAGAAAGAGTCGACTCTCCACTTGGT 15797392 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || || || || || || || |||||| | || || ||| || Sbjct 15796272 ATGCAGATCTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 15796331 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | || | ||| | ||||||||||||| | || || || || Sbjct 15796332 GACACCATCGACAACGTTAAAGCCAAGATTCA-GGACAAGGAAGGCATTCCTCCTGATCA 15796390 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || |||||||||||| | ||| || ||||| || Sbjct 15796391 GCAGAGGCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGGACCTTGGCTGATTACAA 15796450 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || || ||||| ||||| Sbjct 15796451 TATCCAGAAGGAGTCTACGCTTCACCTGGT 15796480 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || ||||| | || ||||| || Sbjct 15797412 ATGCAGATATTTGTGAAGACCCTTACCGGCAAGACCATCACATTGGAGGTTGAGAGTTCG 15797471 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || || | || |||||||||||| | || || |||||| Sbjct 15797472 GACACTATTGATAAAGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 15797531 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||||||| | || || | ||| || || || ||| Sbjct 15797532 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAAC 15797591 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || || || || || ||||| || |||| || || || Sbjct 15797592 ATCCAGAAGGAGTCTACTCTCCACTTGGTGCTAAGGCT 15797629 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| |||| ||||| |||||||| | || || || || Sbjct 15797639 CATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTC 15797698 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | || || | || |||||||||||| | || || ||||| Sbjct 15797699 CGACACTATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCA 15797758 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| | || || | || | ||| || || Sbjct 15797759 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTAGCCGACTACAA 15797818 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || ||||| |||| || Sbjct 15797819 CATCCAGAAGGAGTCCACGCTTCACTTGGTCCT 15797851 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| | ||||| || |||||||| | || || || || Sbjct 15796499 CATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTC 15796558 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || ||| | ||| |||||| || || | || || ||||| Sbjct 15796559 CGACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAAGAGGGTATTCCTCCAGACCA 15796618 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||||||||||||| | || || | ||| || || || || Sbjct 15796619 GCAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAA 15796678 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || || || ||||| || |||| || || || Sbjct 15796679 CATCCAGAAGGAGTCTACTCTCCACTTGGTGCTAAGGCT 15796717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || |||||| |||| || || ||||| || | || || || || Sbjct 15796955 CATGCAAATTTTTGTCAAGACTTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTC 15797014 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | ||||| | || ||| ||||| || | || || ||||| Sbjct 15797015 TGACACTATTGATAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCA 15797074 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || || ||||| ||| |||| || | |||| | || || || Sbjct 15797075 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGAAGGACTCTTGCTGACTACAA 15797134 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| || || || || ||||||||||| || || || || Sbjct 15797135 CATCCAGAAGGAGTCTACTCTTCATCTCGTCCTCAGGCT 15797173 >seq9 Length=37155481 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || || || || || || || ||||| ||| | || || ||| | Sbjct 24151081 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCTTAGAGGTCGAATCA 24151022 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | || || | || |||||||||||| | ||||| ||| Sbjct 24151021 TCCGACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTATCCCGCCGGAC 24150962 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| || || ||| |||||||| | ||| | ||||| Sbjct 24150961 CAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGATTAC 24150902 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || ||||||||||| ||||| || | |||||||| || Sbjct 24150901 AACATCCAGAAGGAGTCGACTCTTCACCTGGTTCTCCGTCTGAGGGGAGG 24150852 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || || || || || || || || ||||| |||||| |||| || || Sbjct 30362240 CAAAGATGCAGATCTTTGTGAAAACCCTTACGGGAAAAACAATCACCCTCGAGGTCGAGT 30362299 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || ||||||||||||| | || |||| Sbjct 30362300 CCTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCG 30362359 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || || ||| |||||||| || | ||| | Sbjct 30362360 ACCAGCAGCGACTGATTTTCGCCGGGAAGCAGCTGGAAGACGGACGCACGCTCGCCGACT 30362419 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | |||| || || || ||||| |||||||| || || Sbjct 30362420 ACAACACCCAGAAGGAGTCGACGCTTCATCTCGTCCT 30362456 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||||| || || || || ||||| | || || || || Sbjct 16984243 CATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACCATCACACTTGAGGTGGAGAGCTC 16984184 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | ||| ||||||||||| | || || ||||| Sbjct 16984183 GGACACCATTGATAACGTCAAGGCCAAAATCCAAGACAAGGAAGGGATCCCTCCAGACCA 16984124 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||| ||| | || || | || | ||| || || Sbjct 16984123 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAA 16984064 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| || || || || ||||| |||| Sbjct 16984063 CATTCAGAAGGAGTCTACCCTTCACTTGGT 16984034 >seq5 Length=23960834 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| | || || || |||||||| |||| || || || Sbjct 16975075 CATGCAGATCTTTGTCAAGACCTTAACGGGAAAGACGATCACACTCGAGGTGGAGAGCTC 16975134 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | ||| ||||||||| || | ||||||||||| Sbjct 16975135 CGACACCATCGATAACGTCAAGGCTAAGATACAGGACAAGGAGGGAATCCCGCCCGACCA 16975194 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || || ||||| |||||||| || | || || ||| || || Sbjct 16975195 GCAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACATTGGCCGACTACAA 16975254 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| || || |||||||||||||| || Sbjct 16975255 CATTCAGAAGGAGTCGACTCTTCATCTCGT 16975284 >seq3 Length=31725688 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| | ||||| || |||||||| | || || || || Sbjct 13311199 CATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTC 13311258 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || ||| | ||| |||||| || || | || || ||||| Sbjct 13311259 CGACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAAGAGGGTATTCCTCCAGACCA 13311318 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||||||||||||| | || || | ||| || || ||||| Sbjct 13311319 GCAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCTGACTATAA 13311378 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || |||||||| |||||||| ||||| || || || | || |||| Sbjct 13311379 CATCCAGAAAGAATCAACTCTTCACCTGGTGCTCAGGCTCCGTGGTGGTA 13311428 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 ||| |||| ||||| || ||||| || || || || || || || |||||| |||| || Sbjct 11140859 GAAGCAAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACAATCACCCTCGAAGTC 11140918 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 || | ||||||| |||| | ||||| | || ||||||||||||| | || Sbjct 11140919 GAGTCCTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCT 11140978 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || ||||||||||| || || ||||| || || ||| |||| ||| || | | Sbjct 11140979 CCGGACCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAGGACGGACGCACCCTCGCC 11141038 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || ||||| || || || || ||||| || || || || Sbjct 11141039 GACTACAACATCCAGAAGGAGTCCACTCTCCACCTCGTCCT 11141079 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| || || || || |||||| |||| || || ||| Sbjct 13310744 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 13310803 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | | ||| | ||| ||||| || | || || || || Sbjct 13310804 GACACCATCGACAACGTTAAGGCCAAGATTCA-GGATAAGGAGGGAATCCCTCCGGATCA 13310862 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| ||||| |||||||||||| | || || || || || Sbjct 13310863 GCAGAGGCTTATCTTCGCCGGCAAGCAGTTGGAAGACGGGAGAACCTTGGCTGACTACAA 13310922 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| || || || | || |||| Sbjct 13310923 CATCCAGAAGGAGTCTACGCTTCACTTGGTCCTCAGGCTTCGTGGTGGTA 13310972 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| ||||| || ||||| | || || || ||| Sbjct 13311428 ATGCAGATTTTCGTTAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGAGCTCC 13311487 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||||||| | || || |||||| Sbjct 13311488 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAG 13311547 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| | || || | || || || || ||| Sbjct 13311548 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAAC 13311607 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || |||||||| |||| || Sbjct 13311608 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCT 13311639 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019 || ||||| |||||| ||||| |||||| || |||| || ||||| || || ||| Sbjct 18728149 ACCTTCGCGGAGAGGAGCATCGCCTTCGCCTGCGCATAAGGGATCTTCTTCTCCGGTAGC 18728208 Query 58020 TT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAA 58078 || ||| | || || ||| | |||||||| || || ||||| || |||| || ||| Sbjct 18728209 TTCTGCT-CGATCTTCTGGCTCAAGAAACGAGGGCTTATGCCTGGTTTGACCTTCTCCAA 18728267 Query 58079 CGAGTTGATATCGCGCGACGAGGG 58102 ||||||||| || || ||||| || Sbjct 18728268 CGAGTTGATCTCTCGAGACGATGG 18728291 >seq1 Length=28635137 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| |||||| ||||||| || |||||||| | || || || || Sbjct 22221647 CATGCAAATCTTCGTCAAGACTTTGACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTC 22221588 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || ||| | ||| ||||||||| || | || |||||||| Sbjct 22221587 CGACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAGGAGGGTATTCCTCCCGACCA 22221528 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || |||||||| || || |||||||| | ||| || ||||| || Sbjct 22221527 GCAGAGGCTTATCTTCGCTGGGAAGCAATTGGAAGATGGCAGGACCTTGGCTGATTACAA 22221468 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| || || || || ||||| |||| Sbjct 22221467 CATTCAGAAGGAGTCTACGCTTCACTTGGT 22221438 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || |||||||| || || |||||||| | || |||||| ||| Sbjct 22222102 ATGCAGATCTTTGTTAAAACTCTGACCGGAAAGACGATCACTTTGGAGGTTGAAAGCTCC 22222043 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| |||| | | | ||| | ||| ||||| || | || || ||||| Sbjct 22222042 GATACCATCGACAACGTTAAGGCCAAGA-TCCAGGATAAGGAGGGAATCCCACCGGACCA 22221984 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || || ||||| |||||||| || | ||| | ||| || || Sbjct 22221983 GCAGAGGCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTTGCCGACTACAA 22221924 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || |||||||||||||| || || || || | || |||| Sbjct 22221923 CATCCAGAAGGAGTCGACTCTTCATCTCGTCCTCAGGCTCCGTGGTGGTA 22221874 >seq7 Length=22597724 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || || |||||| |||| || || Sbjct 13483396 CAAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGGTCGAGT 13483455 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || ||||||||||||| | || || | Sbjct 13483456 CCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGG 13483515 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || |||||| | |||||| || | ||| | Sbjct 13483516 ACCAGCAGCGACTCATCTTCGCCGGGAAACAGCTCGAAGACGGCCGTACCCTCGCCGACT 13483575 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || ||||| |||||||| || || Sbjct 13483576 ACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCT 13483612 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || || || || || || || || || ||||| ||| | || || ||| | Sbjct 8143829 AAAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATC 8143770 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | || || | || |||||||||||| | || || || Sbjct 8143769 ATCCGACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTATCCCTCCGGA 8143710 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| || || ||| |||||||| | ||| | || || Sbjct 8143709 CCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGGAGGACGCTCGCGGACTA 8143650 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || ||||| ||||| |||| || | ||||| || || Sbjct 8143649 CAACATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGCCTGAGAGGAGG 8143599 >seq4 Length=18984343 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || ||||| |||||| |||| || || | Sbjct 357696 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTCGAGTC 357637 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | ||||| || Sbjct 357636 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGA 357577 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||||| || || ||| | || ||| | ||| | ||| || Sbjct 357576 CCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGAGGACCCTCGCCGACTA 357517 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| ||||| || || || Sbjct 357516 CAACATCCAGAAGGAGTCGACGCTTCACCTCGTCCT 357481 >seq3787 Length=174 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 |||||||||||| | ||||| |||||||||||||| || ||||| || || ||| |||| Sbjct 161 GGACAAGGAAGGTATCCCGCCGGACCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGA 102 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| | ||| | ||||| ||||| || || || ||||||||||| ||||| || Sbjct 101 AGACGGAAGGACACTCGCGGATTACAACATCCAGAAGGAGTCGACTCTTCACCTGGTTCT 42 Query 31405 TAGACTGAGGGGCGG 31419 | |||||||| || Sbjct 41 CCGTCTGAGGGGAGG 27 >seq10 Length=17599535 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||| |||||||||| || || ||| | || ||||| || Sbjct 17168593 ATGCAAATATTTGTGAAGACTTTGACAGGCAAGACTATAACCTTGGAAGTTGAGAGCTCA 17168652 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||||||| | || || ||||| Sbjct 17168653 GACACGATAGACAACGTGAAGGCTAAGATTCAGGACAAGGAAGGGATTCCTCCGGACCAA 17168712 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| |||||| | || || || |||| || ||||| ||| Sbjct 17168713 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTAGGACTTTGGCTGATTACAAC 17168772 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || ||||||||||| || || Sbjct 17168773 ATCCAGAAGGAGTCGACTCTTCACCTTGT 17168801 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || ||||| || ||| | || ||||| || Sbjct 17168365 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAAACAATTACCTTGGAGGTTGAGAGCTCT 17168424 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | |||||| || ||| | ||||||||||||| | || || ||||| Sbjct 17168425 GACACGATTGACAACGTCAAAGCAAAGATTCA-GGACAAGGAAGGCATCCCACCAGACCA 17168483 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTC-TATGACTATGAGCGATTA 31368 |||| | || || |||||||| |||||| | || || || || | || || | ||||| Sbjct 17168484 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGTACG-CT-TGCG-GATTA 17168540 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| ||||| || || || || ||||| || || Sbjct 17168541 TAATATTCAGAAGGAGTCTACCCTTCACCTTGT 17168573 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| ||||| || |||||| |||| ||||| ||| Sbjct 17168137 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACCCTCGAGGTTGAGAGCTCC 17168196 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || |||||||||||| | || || |||||| Sbjct 17168197 GACACTATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 17168256 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||| | || || ||||| || || ||| | || || Sbjct 17168257 CAGAGGCTTATCTTCGCCGGTAAGCAGCTAGAGGA 17168291 >seq8 Length=21613650 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || ||||||||| | || || || ||| Sbjct 12585020 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACGATCACCCTTGAGGTCGAGAGTTCC 12585079 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || ||||||||||| | || || |||||| Sbjct 12585080 GACACAATCGACAACGTGAAAGCCAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 12585139 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| ||||| ||| | |||||| || ||| || || || ||| Sbjct 12585140 CAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGTAGAACTCTGGCTGACTACAAC 12585199 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || ||||| || |||| Sbjct 12585200 ATCCAGAAGGAGTCTACTCTCCACTTGGT 12585228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445542129352080