Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq9 107 2e-18 seq5 104 2e-17 seq7 95.1 1e-14 seq10 91.5 1e-13 seq6 91.5 1e-13 seq8 84.2 2e-11 >seq3 Length=31725688 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || || ||||| || |||||| || |||||||| ||||| Sbjct 13310971 ACCACCACGAAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGC 13310912 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | |||| |||| |||||| ||| || | || | | |||||||||| || Sbjct 13310911 CAAGGTTCTCCCGTCTTCCAACTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCCGGAGG 13310852 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | ||||| ||| ||| || ||| | | | || ||||| |||| |||| Sbjct 13310851 GATTCCCTCCTTATCCTGAATCTTGGCCTTAACGTTGTCG--ATGGTGTCGGAGCTCTCC 13310794 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || ||||| || ||||||||||||||||| || ||||||||| Sbjct 13310793 ACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATC 13310743 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || || | || |||||||||||||| Sbjct 11141070 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGC 11141011 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | |||||||| ||| || | | |||||||||| || || Sbjct 11141010 TTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 11140951 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| |||| ||||| |||| || || || || || ||| Sbjct 11140950 GCCTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATTGTCTTCCCCGTG 11140891 Query 48704 AGAGTTTTCACAAAAATCTGCATC 48727 || |||||||| || ||||||||| Sbjct 11140890 AGGGTTTTCACGAAGATCTGCATC 11140867 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48497 AAACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCA 48556 |||||||| || | | | || || ||||| ||| |||||| || |||||||| || Sbjct 13311657 AAACCTCCACGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCT 13311598 Query 48557 GCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACC 48616 ||||| || | ||||| |||||||| || || | || | ||||||||| ||| Sbjct 13311597 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 13311538 Query 48617 GGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCC 48676 || | | ||||||||| || || ||| | | ||||| |||| |||| Sbjct 13311537 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCC 13311478 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | ||| ||||| || ||||| | || || || ||||||||||| Sbjct 13311477 ACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCAT 13311428 >seq9 Length=37155481 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || |||| | |||||| |||||||| || |||||| ||||||||||| |||||| Sbjct 16984244 CCACCACGCAGACGTAACACCAAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 16984303 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || | ||||| |||||||| ||| | | || || | |||||| || || Sbjct 16984304 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGA 16984363 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||||| || || ||| | | ||||| |||| | |||| | Sbjct 16984364 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCAATGGTGTCGGAACTCTCCACC 16984423 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || ||||| |||||||| ||||| || ||||| |||||||| Sbjct 16984424 TCTAGAGTAATGGTCTTACCGGTAAGAGTCTTGACAAAGATCTGCAT 16984470 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT-CGTCCTCCAGCTG 48582 ||||| || |||||| || ||||||||||| | | | |||| | |||| |||||||| Sbjct 24150876 TGAAGAGTCGACTCCTTCTGGATGTTGTAATCCG-CGAGTGTCCTTCCGTCTTCCAGCTG 24150934 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | ||||||||| ||| ||| | || |||||||||| ||| || Sbjct 24150935 CTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCCTGAATCTT 24150994 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || || |||| || || ||| | ||||| || || || || Sbjct 24150995 GGCCTTCACATTGTCGATCGTGTCGGATGATTCGACCTCTAAGGTTATCGTCTTCCCCGT 24151054 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 || ||||||||||| |||||||| Sbjct 24151055 TAGGGTTTTCACAAAGATCTGCAT 24151078 Score = 96.9 bits (106), Expect = 3e-15 Identities = 170/244 (70%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 48484 ACAAAGACAGTCAAAACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTG 48543 |||||||| | ||| || || || | | ||||| || ||||| || |||||| || Sbjct 16984001 ACAAAGACT-TAAAAGCCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTG 16984059 Query 48544 AATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAAC 48602 ||||||||| || | ||| || || | ||||| |||||||| || || | || | || Sbjct 16984060 AATGTTGTAGTC-GGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGAC 16984118 Query 48603 GCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGG 48662 ||||||| || || | | ||||||||| ||||| ||||| | |||| Sbjct 16984119 GCTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATTTTGGCCTTGACGTTATCAATGG 16984178 Query 48663 TATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCT 48722 | || | |||| ||| | ||| ||||| || ||||| ||||| |||||||| |||| Sbjct 16984179 TGTCCGAGCTCTCCACCTCAAGTGTGATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCT 16984238 Query 48723 GCAT 48726 |||| Sbjct 16984239 GCAT 16984242 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| || |||||| || ||||||| || || | || |||| |||||||| Sbjct 30362448 ATGAAGCGTCGACTCCTTCTGGGTGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCCAGCTG 30362389 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || |||| | |||||||| || || | | |||||||||| || || Sbjct 30362388 CTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTT 30362329 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | ||||| |||| ||||| ||||| || || ||||| || || Sbjct 30362328 GGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGT 30362269 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 || ||||||||||| ||||||||| Sbjct 30362268 AAGGGTTTTCACAAAGATCTGCATC 30362244 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| |||| | || || || || || || |||||| || || ||||||||||| Sbjct 16984471 ACCTCCACGCAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGC 16984530 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || ||||||| ||||||||||| | | || ||||||||||| || || Sbjct 16984531 GAGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 16984590 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | || |||||||| || || |||| | | | | ||||| |||| |||| Sbjct 16984591 AATACCCTCCTTGTCTTGGATCTT-AGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCA 16984649 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || ||||||||||| || ||||| |||||||| Sbjct 16984650 CCTCGAGCGTGATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | || || || || || || |||||| |||||||| || ||||| Sbjct 16960472 ACCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGC 16960531 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||| |||||||| ||| | | || ||||||||||| ||| || Sbjct 16960532 CAAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGG 16960591 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | | ||| ||||| ||||| |||| | | | ||||| |||| | |||| Sbjct 16960592 AATGCCTTCTTTGTCTTGGATTTT-GGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCA 16960650 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| || ||||| || || || ||||| |||||||| Sbjct 16960651 CCTCTAGAGTAATGGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960699 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 48537 CCTTT-TGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || |||||||| ||||||| || | || || ||||| || || || | Sbjct 26352611 CCTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAG 26352552 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || || |||||||||||| || | || ||| ||||| || || ||||| | Sbjct 26352551 ATCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTG 26352492 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| |||| ||||| ||||| || ||||| || ||||| || |||||||| Sbjct 26352491 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCACG 26352432 Query 48716 AAAATCTGCATC 48727 || ||||||||| Sbjct 26352431 AAGATCTGCATC 26352420 >seq5 Length=23960834 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | |||||| | |||||| || |||||| ||||||||||| || ||| Sbjct 16975302 CCTCCACGCAGACGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGCC 16975243 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 ||| || | ||||||| |||||| ||| | | || ||||||||||| || ||| Sbjct 16975242 AATGTACGACCATCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGGG 16975183 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||||||| || || ||||| | ||||| |||| |||| | Sbjct 16975182 ATTCCCTCCTTGTCCTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACC 16975123 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| ||| || || || || || | || || ||||| |||||||| Sbjct 16975122 TCGAGTGTGATCGTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCAT 16975076 >seq7 Length=22597724 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || ||||| || |||||| || |||||||| || || | | | |||| || Sbjct 8143616 CACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTCCTCCCGTCTTC 8143675 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| ||| || | || | ||||||||| ||| || | || |||||||||| Sbjct 8143676 CAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 8143735 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || ||| | | | || || |||| || || ||| | ||||| || || Sbjct 8143736 AATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGACCTCTAGGGTTATCGTCTT 8143795 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || || ||||||||||| |||||||| Sbjct 8143796 CCCCGTTAGGGTTTTCACAAAGATCTGCAT 8143825 >seq10 Length=17599535 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || || ||||||||||| | | || | ||||| |||||||||||| || | Sbjct 17168100 CTCCTTCTGGATATTGTAATCAGCGAGTGTGCGTCCATCCTCTAGCTGCTTACCGGCGAA 17168041 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | | |||||| ||| || | || |||||||||| || || ||||| Sbjct 17168040 GATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTT 17167981 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | ||||| || | ||| ||||| || ||||| || |||||||| |||||||| Sbjct 17167980 ATCGATGGTGTCAGAGCTCTCGACCTCGAGAGTAATGGTCTTGCCGGTGAGCGTTTTCAC 17167921 Query 48715 AAAAATCTGCATC 48727 ||||| |||||| Sbjct 17167920 GAAAATTTGCATC 17167908 >seq6 Length=26286742 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC--GCTCGTCCTCCAGCT 48581 ||||| || |||||| || || |||||||||||||| ||| || |||| |||| || Sbjct 15796474 TGAAGCGTAGACTCCTTCTGGATATTGTAATCAGCCAA-GGTCCTGC-CGTCTTCCAACT 15796417 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || | || | | ||||||||| || | | |||||||||| ||| | Sbjct 15796416 GCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCT 15796357 Query 48642 TCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 | |||| | | | | ||||| || | ||| ||| | || ||||| || ||| Sbjct 15796356 T-GGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCG 15796298 Query 48701 GTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| ||||||||||| ||||||||| Sbjct 15796297 GTGAGGGTTTTCACAAAGATCTGCATC 15796271 >seq8 Length=21613650 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | ||||| || || || | ||||||| || |||||||| ||||| Sbjct 12585019 ACCTCCACGAAGACGCAACACCAAGTGGAGATTAGTCTCCTTCTGGATGTTGTAGTCAGC 12584960 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || |||| || |||||||| ||| || | || || | |||||||||| || Sbjct 12584959 GAGAGTTCTACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGGG 12584900 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | |||||| ||| || || |||| | | || ||||| |||| ||| Sbjct 12584899 AATGCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCG--ATGGTGTCGGAGCTTTCC 12584842 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCG 48728 ||||| || || || || ||||||||||| || || || |||||||||| Sbjct 12584841 ACCTCGAGGGTGATCGTCTTCCCGGTGAGAGTCTTAACGAAGATCTGCATCG 12584790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421044561674249