Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9 136 3e-27 seq5 125 6e-24 seq1 122 7e-23 seq6 118 9e-22 seq8 114 1e-20 seq3 113 4e-20 seq10 104 2e-17 seq4 102 7e-17 >seq9 Length=37155481 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| ||| | ||||| || ||| |||| || || ||||| | | || Sbjct 16984698 ATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACGATCACGCTCGAGGTGGAGAGCTCC 16984639 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| || || |||||||||||||||||||| ||||| || Sbjct 16984638 GACACCATCGACAACGTTAAAGCTAAGATCCAAGACAAGGAGGGTATTCCTCCCGACCAG 16984579 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || || ||| | ||||| | | ||| || | |||||||| Sbjct 16984578 CAGCGTTTGATCTTTGCTGGTAAGCAGCTCGAGGACGGCAGAACCCTCGCTGATTACAAT 16984519 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || ||||| |||| |||||| Sbjct 16984518 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGTCTGCGTGGAGGT 16984471 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || |||| ||||| ||||| | | | Sbjct 16984242 ATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACCATCACACTTGAGGTGGAGAGCTCG 16984183 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| ||||| ||||||||||| || || || || || || Sbjct 16984182 GACACCATTGATAACGTCAAGGCCAAAATCCAAGACAAGGAAGGGATCCCTCCAGACCAG 16984123 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| | |||| |||||| Sbjct 16984122 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAAC 16984063 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 ||||| || || || ||| | || || || ||||| | || || || ||| Sbjct 16984062 ATTCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGCTTT 16984012 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || ||||| ||| | || || || || |||| ||||| ||||||| | Sbjct 16984928 AGATGCAGATCTTCGTTAAGACTCTCACAGGAAAGACCATCACCCTTGAGGTGGAAAGCT 16984869 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| ||| | ||| | |||| || ||||| ||||||||||| || ||||| |||| Sbjct 16984868 CCGACACCATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCACCGGATC 16984809 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||| | ||||| || ||||| || || | |||||| || || || | || |||| Sbjct 16984808 AGCAAAGGCTTATCTTCGCCGGGAAGCAACTCGAGGATGGACGTACTCTCGCTGACTACA 16984749 Query 22397 ACATTCAAAAAGAATCCACCATACAT 22422 |||| || || || || ||| | ||| Sbjct 16984748 ACATCCAGAAGGAGTCGACCCTTCAT 16984723 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || |||||||| || || | ||| | || ||||| | | Sbjct 16960927 ATGCAAATCTTCGTTAAGACATTAACCGGAAAGACTATTACTTTGGAGGTGGAGAGTTCA 16960868 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || || ||||||||||||||||| || ||||| Sbjct 16960867 GATACTATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCGGATCAG 16960808 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | |||||| || ||| | | || || ||| Sbjct 16960807 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTATAAC 16960748 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | || || || ||||| | || |||||| Sbjct 16960747 ATTCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGTCTACGTGGAGGT 16960700 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || | ||||| || ||||| | || Sbjct 16960471 ATGCAGATCTTTGTCAAGACACTGACCGGGAAGACCATTACTCTAGAGGTGGAGAGTTCC 16960412 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| ||||| |||||||| || || ||||| || || || Sbjct 16960411 GACACCATTGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCGGACCAG 16960352 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||||||||| ||| | |||||| |||||| | | || |||||| Sbjct 16960351 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACCCTAGCTGACTACAAC 16960292 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || ||||| || ||| | || || || | || | || || ||||| Sbjct 16960291 ATCCAGAAAGAGTCGACCCTTCACTTGGTGCTACGTCTCCGTGGTGGTTT 16960242 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || | ||||| || ||||| | || Sbjct 16960699 ATGCAGATCTTTGTCAAGACACTGACCGGGAAGACCATTACTCTAGAGGTGGAGAGTTCC 16960640 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| ||||| |||||||| || || ||||| || || || Sbjct 16960639 GACACCATTGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCGGACCAG 16960580 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||||||||| ||| | |||||| || ||| | | || || ||| Sbjct 16960579 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTATAAC 16960520 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | || || || ||||| | || |||||| Sbjct 16960519 ATTCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGTCTACGTGGAGGT 16960472 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| || || ||||| || | || || || ||| ||||| | || ||||| | Sbjct 16961160 TACAGATGCAGATCTTCGTTAAGACACTGACAGGGAAGACGATCACTTTGGAGGTGGAGA 16961101 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | |||||| | ||| | | ||| || ||||| || || || |||||||| | | Sbjct 16961100 GCTCTGATACCATCGACAACGTTAAAGCCAAGATTCAGGATAAAGAAGGTATTCCTCAGG 16961041 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 |||| ||| | | || |||||||| || ||| | || ||| || ||| || | || | Sbjct 16961040 ATCAGCAAAGATTGATCTTTGCCGGTAAGCAGCTTGAAGATGGGCGTACCCTCGCTGACT 16960981 Query 22394 ACAACATTCAAAAAGAATCCAC 22415 ||||||||||||| || || || Sbjct 16960980 ACAACATTCAAAAGGAGTCAAC 16960959 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | |||||||| || | ||||| || ||||| | || Sbjct 16984470 ATGCAGATCTTTGTCAAGACTCTTACCGGTAAGACCATTACTCTAGAGGTGGAGAGTTCC 16984411 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || |||||||| || ||||| || || || Sbjct 16984410 GACACCATTGACAACGTTAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 16984351 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | |||||| || ||| | | || |||||| Sbjct 16984350 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAC 16984291 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || | ||||| || || || |||| || || Sbjct 16984290 ATTCAGAAGGAGTCGACTCTTCATTTGGTGTTACGTCTGCGTGGTGG 16984244 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| ||||| |||| || || ||| | || | || || ||| | Sbjct 24151081 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCTTAGAGGTCGAATCA 24151022 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | ||| || | || || ||||| |||||||| ||||| || || || Sbjct 24151021 TCCGACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTATCCCGCCGGAC 24150962 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || ||||| || ||| | || || | || || | |||||| Sbjct 24150961 CAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGATTAC 24150902 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || || || || Sbjct 24150901 AACATCCAGAAGGAGTCGAC 24150882 >seq5 Length=23960834 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || ||||| || || ||| |||| || || ||||| | | || Sbjct 16975076 ATGCAGATCTTTGTCAAGACCTTAACGGGAAAGACGATCACACTCGAGGTGGAGAGCTCC 16975135 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || ||||||||||| || || ||||| || Sbjct 16975136 GACACCATCGATAACGTCAAGGCTAAGATACAGGACAAGGAGGGAATCCCGCCCGACCAG 16975195 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||||||||| ||||| |||||| || || | |||| |||||| Sbjct 16975196 CAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACATTGGCCGACTACAAC 16975255 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || | ||| | || || || |||| ||||| Sbjct 16975256 ATTCAGAAGGAGTCGACTCTTCATCTCGTGTTACGTCTGCGTGGAGG 16975302 Score = 122 bits (134), Expect = 7e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||| | || || ||||| || || ||| |||| ||||| ||||||| | | Sbjct 16974847 GATGCATATCTTTTTCAAGACCTTAACGGGAAAGACGATCACCCTTGAGGTGGAAAGCTC 16974906 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| || | ||| || ||||||||||||||||| ||||| || ||||| Sbjct 16974907 TGACACCATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGATCA 16974966 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || || ||||| || ||| | ||||| | ||| | |||||||||| Sbjct 16974967 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGGAGAACCCTAGCCGATTACAA 16975026 Query 22398 CATTCAAAAAGAATCCACCATACAT 22422 ||| || || || || || ||||| Sbjct 16975027 CATCCAGAAGGAGTCGACTCTACAT 16975051 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || ||||| || | || || || ||| |||| ||||| ||||||| | Sbjct 16974618 AGATGCAGATCTTCGTTAAGACACTCACGGGAAAGACGATCACCCTTGAGGTGGAAAGCT 16974677 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| || | ||| || ||||||||||||||||||||||| || |||| Sbjct 16974678 CTGACACCATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATC 16974737 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | || || | ||||| || ||| | ||||| | ||| | ||||||||| Sbjct 16974738 AGCAGAGGCTCATCCTCGCCGGAAAGCAGCTCGAGGAGGGGAGAACCCTAGCCGATTACA 16974797 Query 22397 ACATTCAAAAAGAATCCACCATACAT 22422 ||| || || || || || ||||| Sbjct 16974798 ACACCCAGAAGGAGTCGACTCTACAT 16974823 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || ||||| || |||| || || || || | | | Sbjct 16975304 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACCATCACACTGGAGGTCGAGAGCTCG 16975363 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || ||||||||||| || || || || || || Sbjct 16975364 GACACGATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 16975423 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||| |||||| Sbjct 16975424 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTAGCCGACTACAAC 16975483 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || || || || || ||| | || || || ||||| | || || || ||| Sbjct 16975484 ATCCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGCTTT 16975534 >seq1 Length=28635137 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || ||| |||| || || ||||| | || Sbjct 22221646 ATGCAAATCTTCGTCAAGACTTTGACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTCC 22221587 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| ||||| || ||||||||||||||||| ||||| || Sbjct 22221586 GACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 22221527 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| || || || || || || || ||| | | ||| | | ||||||||| Sbjct 22221526 CAGAGGCTTATCTTCGCTGGGAAGCAATTGGAAGATGGCAGGACCTTGGCTGATTACAAC 22221467 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || | || || || ||||| | || ||||| Sbjct 22221466 ATTCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTACGTGGAGG 22221420 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| ||||| || || || || ||||| | || || |||| | || Sbjct 22221874 ATGCAAATCTTCGTTAAGACTTTGACGGGAAAGACTATCACTTTGGAGGTTGAAAGCTCC 22221815 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| || || |||||||| |||||||| ||||| || || Sbjct 22221814 GACACTATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 22221755 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || ||| | |||||| |||||| | | ||||||||| Sbjct 22221754 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGTCGCACCTTGGCAGATTACAAC 22221695 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || || || ||||| | || ||||| Sbjct 22221694 ATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTACGTGGAGG 22221648 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || |||||||||||| | ||||| || ||| ||||| | || || |||| | Sbjct 22222104 AGATGCAGATCTTTGTTAAAACTCTGACCGGAAAGACGATCACTTTGGAGGTTGAAAGCT 22222045 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||||||| | ||| | | || || || || || |||||||| || ||||| || | Sbjct 22222044 CCGATACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACC 22221985 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | || || ||||||||||| ||||| |||||| | || | |||| |||| Sbjct 22221984 AGCAGAGGCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTTGCCGACTACA 22221925 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| || || || || || Sbjct 22221924 ACATCCAGAAGGAGTCGAC 22221906 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22236 AACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATAT 22295 ||| || ||||| || || |||| || || ||||| | | |||| ||| | ||| | | Sbjct 22221352 AACCTTGACCGGCAAGACCATCACACTGGAGGTGGAGAGCTCCGACACCATTGACAACGT 22221293 Query 22296 CAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGC 22355 ||| || || ||||||||||| ||||| || || || || || ||||| || || || Sbjct 22221292 CAAGGCCAAGATCCAAGACAAGGAAGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGC 22221233 Query 22356 CGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || || ||| | |||||| |||||| | | || |||||||| || || || || || Sbjct 22221232 TGGAAAGCAGCTCGAGGATGGTCGCACCTTAGCAGACTACAACATCCAGAAGGAGTCGAC 22221173 >seq6 Length=26286742 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| || || || ||| | ||| | || ||||| | | | Sbjct 15797184 ATGCAAATTTTTGTCAAGACTTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCT 15797243 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || ||||| || |||||||| || ||||| || || Sbjct 15797244 GACACTATTGATAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCAG 15797303 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | |||||||||||||| ||||| |||||| | || | | || |||||| Sbjct 15797304 CAGAGGTTGATATTTGCCGGCAAGCAGTTGGAGGATGGAAGGACTCTAGCTGACTACAAC 15797363 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || || | || || || ||||| | || |||||| Sbjct 15797364 ATTCAGAAAGAGTCGACTCTCCACTTGGTCTTGCGTCTACGTGGAGGT 15797411 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || || ||||| || ||| |||| ||||| ||||| | | || Sbjct 15797640 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTCC 15797699 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || ||||||||||| || || || || || || Sbjct 15797700 GACACTATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAG 15797759 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||| |||||| Sbjct 15797760 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTAGCCGACTACAAC 15797819 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 15797820 ATCCAGAAGGAGTCCAC 15797836 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || || ||||| || ||| |||| ||||| ||||| | | || Sbjct 15796728 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTCC 15796787 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || ||||||||||| || || || || || || Sbjct 15796788 GACACTATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 15796847 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||||||| | |||||| || || | | || |||||| Sbjct 15796848 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAAC 15796907 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 15796908 ATCCAGAAGGAGTCTAC 15796924 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || |||||||| || || ||| |||| || || ||||| | || Sbjct 15796500 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTCC 15796559 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| ||||| || ||||| ||||||||||| || || || Sbjct 15796560 GACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAAGAGGGTATTCCTCCAGACCAG 15796619 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || ||||||||| | |||||| || || | | || |||||| Sbjct 15796620 CAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAAC 15796679 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 15796680 ATCCAGAAGGAGTCTAC 15796696 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| || || || ||| | ||| | || ||||| | | | Sbjct 15796956 ATGCAAATTTTTGTCAAGACTTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCT 15797015 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || ||||| || |||||||| || ||||| || || Sbjct 15797016 GACACTATTGATAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCAG 15797075 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||| ||| | |||||| | || | | || |||||| Sbjct 15797076 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGAAGGACTCTTGCTGACTACAAC 15797135 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 15797136 ATCCAGAAGGAGTCTAC 15797152 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| || || || || || || || ||||| || || || ||||| Sbjct 18962095 AAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAGCAGCGTCTCATCTTCGCTGGCAAG 18962154 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| |||||| | |||| |||||||| || ||||| ||||| | || Sbjct 18962155 CAGCTTGAGGATGGTCGCACCTTAGCCGACTACAACATCCAGAAAGAGTCCACTCTTCAC 18962214 Query 22423 TTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || || ||||| | || || || ||| Sbjct 18962215 TTGGTGTTGCGTCTCCGTGGTGGCTTT 18962241 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||| ||| | ||| || ||| | | || | ||| | |||||| | || || | | Sbjct 15935958 ATGCGAATCTATGTAAAGACTCTTATAGGCATAACCATAACTCTTAACGTCCGAAGCTCG 15936017 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | ||||| || || ||| ||||| || || || ||| | Sbjct 15936018 GACACCATTGGCAACGTCAAATCAAGGATACAATTTAAGGAAGGAATCCCTAGCGACAAG 15936077 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| |||| |||||||||| | ||||||||||| ||||| | |||||||| Sbjct 15936078 CAGAGGCTTATCTTTGGCGGCAAACAGATGGAGGATCACCGTACCGTGGCTGATTACAAT 15936137 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || | |||||| || || ||||| || ||| Sbjct 15936138 ATCCTAAAAGATTCAACTATACACTTGGTT 15936167 >seq8 Length=21613650 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || | |||||||| || || |||| || || ||||| | | | Sbjct 12585248 ATGCAGATCTTTGTCAAGAACTTAACCGGAAAGACCATCACACTGGAGGTGGAGAGCTCG 12585307 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || ||||||||||| | || || || || || Sbjct 12585308 GACACCATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGACATCCCTCCAGACCAG 12585367 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||| |||||| Sbjct 12585368 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAAC 12585427 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 |||||||| || || ||| | || || || ||||| | ||||| || ||| Sbjct 12585428 ATTCAAAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGCGGTGGCTTT 12585478 >seq3 Length=31725688 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || || ||||| || || |||| ||||| ||||| | | || Sbjct 13311428 ATGCAGATTTTCGTTAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGAGCTCC 13311487 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || ||||||||||| || || || || || || Sbjct 13311488 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAG 13311547 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | | || |||||| Sbjct 13311548 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAAC 13311607 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || || ||||| | || || || | || | || |||||||| Sbjct 13311608 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGTGGAGGTTT 13311657 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || || ||||| | || || || | | | Sbjct 13310972 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATCACTTTGGAGGTTGAGAGCTCT 13311031 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || || |||||||| || ||||| || || Sbjct 13311032 GACACTATTGACAATGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 13311091 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||||| || ||| |||||| | | ||||||||| Sbjct 13311092 CAGAGGTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGTCGCACCTTGGCGGATTACAAC 13311151 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| ||||| || || | || || || ||||| | || ||||| Sbjct 13311152 ATTCAGAAAGAGTCAACTCTTCACTTGGTCTTGCGTCTACGTGGAGG 13311198 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || |||||||| || || ||| |||| || || ||||| | || Sbjct 13311200 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTCC 13311259 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| ||||| || ||||| ||||||||||| || || || Sbjct 13311260 GACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAAGAGGGTATTCCTCCAGACCAG 13311319 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || ||||||||| | |||||| || || | | || || ||| Sbjct 13311320 CAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCTGACTATAAC 13311379 Query 22399 ATTCAAAAAGAATCCAC 22415 || || |||||||| || Sbjct 13311380 ATCCAGAAAGAATCAAC 13311396 >seq10 Length=17599535 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||||||||| || ||||| | ||||| || || | ||||| || || || | | Sbjct 17167907 AGATGCAAATTTTCGTGAAAACGCTCACCGGCAAGACCATTACTCTCGAGGTCGAGAGCT 17167966 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | || | |||| || || || |||||||| |||||||| || || | Sbjct 17167967 CTGACACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACC 17168026 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | ||||| || ||||| || ||| |||||||| ||||| || | ||||||| Sbjct 17168027 AGCAGAGGCTTATCTTCGCCGGTAAGCAGCTAGAGGATGGACGCACACTCGCTGATTACA 17168086 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | || || || || || || | || | ||| |||| | || || ||| Sbjct 17168087 ATATCCAGAAGGAGTCTACTCTCCACCTTGTTCTGCGTCTTCGTGGTGGT 17168136 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||||||||| | || | || || || | | | Sbjct 17168365 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAAACAATTACCTTGGAGGTTGAGAGCTCT 17168424 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| ||| ||||| |||||||| || || ||||| || || Sbjct 17168425 GACACGATTGACAACGTCAAAGCAAAGATTCAGGACAAGGAAGGCATCCCACCAGACCAG 17168484 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || || |||||| | |||||| || || | | ||||| || Sbjct 17168485 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGTACGCTTGCGGATTATAAT 17168544 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| || || || ||| | || | || ||||| Sbjct 17168545 ATTCAGAAGGAGTCTACCCTTCACCTTGTGTTGCG 17168579 >seq4 Length=18984343 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| |||| |||||||| |||| || || || || | Sbjct 357696 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTCGAGTC 357637 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | |||| ||| | ||| | |||| || || ||||||||||| || || || || || Sbjct 357636 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGA 357577 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || || || || ||||| || ||| | ||||| | ||| || |||| || Sbjct 357576 CCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGAGGACCCTCGCCGACTA 357517 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| || || || || || Sbjct 357516 CAACATCCAGAAGGAGTCGAC 357496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419522108856685