Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9 125 7e-24 seq7 111 2e-19 seq4 111 2e-19 seq6 109 5e-19 seq2 109 5e-19 seq3 102 8e-17 seq5 98.7 1e-15 seq8 93.3 4e-14 seq1 93.3 4e-14 seq10 86.0 6e-12 >seq9 Length=37155481 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | |||||||| |||||||| ||||| | Sbjct 16960473 CCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCC 16960532 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||||| || || |||| | |||| | |||||| ||||||||||| Sbjct 16960533 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGA 16960592 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| ||| | | || | |||||||| ||||||| Sbjct 16960593 ATGCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 16960652 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || ||||| || || ||||| |||||||| Sbjct 16960653 TCTAGAGTAATGGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960699 Score = 116 bits (128), Expect = 4e-21 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||| || || ||||| | | |||||||| |||||||||||||| Sbjct 16984243 GCCACCACGCAGACGTAACACCAAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGC 16984302 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| |||||||| || || |||| | |||| | | ||| ||||| ||||| Sbjct 16984303 CAAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGG 16984362 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| ||||| || | || | |||| ||| || | |||||||| |||| Sbjct 16984363 AATGCCTTCCTTGTC-CTGGATCTTAGCCTTAACGTTG-TCAATGGTGTCGGAACTCTCC 16984420 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || ||||| || ||||| || ||||| |||||||| Sbjct 16984421 ACCTCTAGAGTAATGGTCTTACCGGTAAGAGTCTTGACAAAGATCTGCAT 16984470 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | |||||||| || || ||||| || Sbjct 16984472 CCTCCACGCAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCG 16984531 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||||||| || ||||| | | |||| | |||||| ||||| ||||| Sbjct 16984532 AGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGA 16984591 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| || | ||||| |||| | | |||||||| ||||| Sbjct 16984592 ATACCCTCCTTGTCTTGGATCTTA-GCTTTAACGTTGT-CGATGGTGTCGGAGCTCTCCA 16984649 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| ||| | ||| || || || ||||| || ||||| |||||||| Sbjct 16984650 CCTCGAGCGTGATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || || || | ||| | || || || | | | ||||| || || ||||||||||| ||| Sbjct 16960245 CCACCACGGAGACGTAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCT 16960304 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || |||||||| || || |||| | |||| | |||||| ||||||||||| Sbjct 16960305 -AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGG 16960363 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| |||||| ||| | | || | |||||||| |||||| Sbjct 16960364 AATGCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCAC 16960423 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || ||||| || || ||||| |||||||| Sbjct 16960424 CTCTAGAGTAATGGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960471 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | |||||| || || || | | | |||||||| ||||||||||||||| Sbjct 16984014 AGCCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGG 16984073 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | || || ||||| || || || || | |||| |||||||| ||||| |||| Sbjct 16984074 CAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAG 16984133 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || ||||| ||||| |||||| || | | || | |||||| | ||||| Sbjct 16984134 GGATCCCTTCCTTGTCTTGGATTTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCA 16984193 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | || || || || ||||| || ||||| ||||||||| Sbjct 16984194 CCTCAAGTGTGATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATG 16984243 Score = 105 bits (116), Expect = 7e-18 Identities = 141/192 (73%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 138425 CCTTT-TGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| || ||||||||||| || |||||| || ||||| ||||| || | || Sbjct 26352611 CCTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAG 26352552 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTG 138542 || | ||||| || |||||||| |||||||||||||| ||| || || | |||| Sbjct 26352551 ATCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTG 26352492 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||| ||||||| || | || || || ||||| ||||| || Sbjct 26352491 -TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCAC 26352433 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 26352432 GAAGATCTGCAT 26352421 Score = 100 bits (110), Expect = 3e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||||||||||||||||||||| | |||||| || || || || ||||||| Sbjct 16960960 TTGACTCCTTTTGAATGTTGTAGTCAGCGAGGGTACGCCCATCTTCAAGCTGCTTACCGG 16961019 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| | | || || ||| |||| ||||||||||| || ||| | || | |||| Sbjct 16961020 CAAAGATCAATCTTTGCTGATCCTGAGGAATACCTTCTTTATC-CTGAATCTTGGCTTTA 16961078 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | ||| || | ||||||||| | || | ||| || || ||||| || Sbjct 16961079 ACGTTG-TCGATGGTATCAGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCTGTCAGTGT 16961137 Query 138597 TTTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 16961138 CTTAACGAAGATCTGCAT 16961155 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||| || || || || |||| Sbjct 30362438 GACTCCTTCTGGGTGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCCAGCTGCTTCCCGGCG 30362379 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || || ||||| ||||| ||||| || ||||| ||||| ||| || || | | Sbjct 30362378 AAAATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACA 30362319 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| ||||| ||||||| || | ||||| || || || ||||| Sbjct 30362318 TTG-TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGTAAGGGTTTT 30362260 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 30362259 CACAAAGATCTGCAT 30362245 >seq7 Length=22597724 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| ||| ||||| ||||| |||| Sbjct 13483594 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCGAGCTGTTTCCCGGCG 13483535 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 13483534 AAGATGAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 13483475 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||| ||||||| || | || || || || || ||||| Sbjct 13483474 TTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTC 13483415 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 13483414 ACGAAGATCTGCAT 13483401 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || | | ||| || || || || |||| Sbjct 8143632 GACTCCTTCTGGATGTTGTAGTCCGCGAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCG 8143691 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| |||||||| ||||||||||| |||||||| ||||| ||| | || | || Sbjct 8143692 AAGATCAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTC-CTGAATCTTGGCCTTCAC 8143750 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||||||| || || ||||| | || | ||| || || || || |||| Sbjct 8143751 ATTG-TCGATCGTGTCGGATGATTCGACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTT 8143809 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 8143810 TCACAAAGATCTGCAT 8143825 >seq4 Length=18984343 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || | | ||||||||| || || |||| Sbjct 357499 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCG 357558 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 357559 AAGATCAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACG 357618 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||| ||||||| || | |||||||| || || ||||| Sbjct 357619 TTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTACCCGTTAGGGTTTTC 357678 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 357679 ACGAAGATCTGCAT 357692 >seq6 Length=26286742 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || |||||| ||||| || ||||| || | Sbjct 15796693 GACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCAAGCTGTTTGCCAGCG 15796634 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| ||||| ||||| |||||||| |||||| ||| | Sbjct 15796633 AAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGGATTTTGGCTTTCACG 15796574 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||| | ||| | ||| || || || | ||| || Sbjct 15796573 TTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTCTTTCCTGTTAAAGTCTTC 15796514 Query 138601 ACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 15796513 ACGAAGATCTGCATGCCT 15796496 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || |||||| ||||| || ||||| || | Sbjct 15796921 GACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCAAGCTGTTTGCCAGCG 15796862 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 15796861 AAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 15796802 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||||||||| | ||| | ||| || || |||| || || Sbjct 15796801 TTGTCAATAGTGTCGGAGCTCTCCACCTCAAGCGTGATCGTCTTGCCGGTCAATGTCTTA 15796742 Query 138601 ACAAAAATCTGCATG 138615 || |||||||||||| Sbjct 15796741 ACGAAAATCTGCATG 15796727 Score = 104 bits (114), Expect = 2e-17 Identities = 338/514 (66%), Gaps = 16/514 (3%) Strand=Plus/Plus Query 52329 CCGTGCGTTCGCAAA-AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCAC 52387 || ||||| ||| || ||||| || ||||| |||||||||||||| | | | | || Sbjct 22599441 CCTTGCGT-CGCGAAGAAGGCCCAATGGGCCATGAAGTGGATCGACGGAT-CTCAG--AC 22599496 Query 52388 GCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTT 52447 | |||||| | || ||||| || || || || || | || || ||||| ||||| Sbjct 22599497 TTTCGCCGAGAGGATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTT 22599556 Query 52448 TGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGA 52507 | ||||||| | | || | | ||| | ||||| || | || ||| |||||| Sbjct 22599557 CTGCTCCATCTTCTGGCTGAAGAAGCGAGGGCTCATGCCGGGTTTAACCTTCTCCAACGA 22599616 Query 52508 GTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCG 52567 |||||| || || |||||||| || ||| ||||| || ||||| ||| | | | Sbjct 22599617 GTTGATCTCTCGAGACGAAGGCCTTCACTGCGACTTCGCCTGCCTGATCTATA---CTCT 22599673 Query 52568 CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGC---ATGTTCAAGGAGGCGGTGGC 52624 ||| || || | |||| | | ||| || || || ||||||| Sbjct 22599674 ATTGAG-GACGAAGCTCA--CGGAGGAGCGCGTGAAGTCGATTGTCTGCGACGCGGTGGA 22599730 Query 52625 TATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCA 52684 ||||| | ||||||| | | |||||| ||| || | || |||| |||||| | Sbjct 22599731 GATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGGTGGGGATGAACCGTGA 22599790 Query 52685 GTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCC 52744 | ||| | |||| || ||||||||||||||| | || |||| ||| ||| || Sbjct 22599791 TTTGATGAGTCAGTATATTGAGTTTGTGGCGGATAGGCTTTTGGGCGCGCTTGGGTAGGG 22599850 Query 52745 AAAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803 ||| | | | | || ||||||||||| | ||| | ||||||||| |||| | Sbjct 22599851 GAAGGTGTACGGTG-TGGCGAATCCGTTTGATTGGATGGAGTTGATTTCGCTTCAGGGGA 22599909 Query 52804 AGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 | || ||||| || |||||| |||| || || || Sbjct 22599910 AAACGAACTTCTTTGAGAAGAGAGTTGGGGATTA 22599943 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || || | Sbjct 15797833 GACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCG 15797774 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 15797773 AAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 15797714 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||||||||| | ||| | ||| || || |||| || || Sbjct 15797713 TTGTCAATAGTGTCGGAGCTCTCCACCTCAAGCGTGATCGTCTTGCCGGTCAATGTCTTA 15797654 Query 138601 ACAAAAATCTGCATG 138615 || |||||||||||| Sbjct 15797653 ACGAAAATCTGCATG 15797639 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || |||||| ||||| || ||||| || | Sbjct 15797605 GACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCAAGCTGTTTGCCAGCG 15797546 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| || ||||| ||||| ||| || || | | Sbjct 15797545 AAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACT 15797486 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||| ||||| | || | || || || || || || || Sbjct 15797485 TTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTCTTGCCGGTAAGGGTCTTC 15797426 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 15797425 ACAAATATCTGCAT 15797412 >seq2 Length=27864329 Score = 109 bits (120), Expect = 5e-19 Identities = 338/512 (66%), Gaps = 12/512 (2%) Strand=Plus/Plus Query 52329 CCGTGCGTTCGCAAA-AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCAC 52387 || ||||| ||| || ||||| || ||||| ||||||||||||| | | | | || Sbjct 22153367 CCTTGCGT-CGCGAAGAAGGCCCAATGGGCCTTGAAGTGGATCGATGGAT-CTCAG--AC 22153422 Query 52388 GCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTT 52447 | || ||| | || ||||||||||| || || || | || || ||||| ||||| Sbjct 22153423 TTTCGCAGAGAGGATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTT 22153482 Query 52448 TGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGA 52507 | ||||||| | | || | | ||| | ||||| || || || ||| |||||| Sbjct 22153483 CTGCTCCATCTTCTGGCTCAAGAAGCGAGGGCTCATGCCGGGGCTCACCTTCTCCAACGA 22153542 Query 52508 GTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCG 52567 | |||| ||||| |||||||| || ||| ||||| |||||||| ||| | | Sbjct 22153543 GCTGATCTCGCGGGACGAAGGCCTTCACTGCGACTTCGCGTGCCTGATCTATACCTTGTT 22153602 Query 52568 CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTAT 52627 ||| | || ||| | | || || | ||| | || ||||||| || Sbjct 22153603 GAGGACGAAGCTATCGGAGGAGCGCGTGAAGTCGATCGTGTGC---GACGCGGTGGAGAT 22153659 Query 52628 CGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC 52687 ||| | ||||||| | | |||||| || || | || |||| |||||| | | | Sbjct 22153660 CGAGAGGGAGTTTGTGTGCGACGCGCTTCCCTGCGCGTTGGTGGGGATGAACCGGGACTT 22153719 Query 52688 CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTT-GGTGCAGCTCGGGCAGCCAA 52746 ||| | |||| || ||||||||||||||| | || || ||||| ||| ||| | | Sbjct 22153720 GATGAGTCAGTATATTGAGTTTGTGGCGGATAGGCTTTTGGGTGC-GCTTGGGTACGGGA 22153778 Query 52747 AGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAG 52805 || | | | | || ||||||||||| | ||| | || |||||| |||| || Sbjct 22153779 AGGTGTACGGTG-TGGCGAATCCGTTTGATTGGATGGAGTTGATCTCGCTTCAGGGTAAA 22153837 Query 52806 ACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || || || ||||||||| | || || || || Sbjct 22153838 ACGAATTTCTTCGAGAAGAGGGTTGGTGATTA 22153869 >seq3 Length=31725688 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || || || |||| Sbjct 11141061 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCG 11141002 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||||||||| || ||||| ||||| ||| || || | | Sbjct 11141001 AAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACA 11140942 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| ||||| || |||| || | || || || || || ||||| Sbjct 11140941 TTG-TCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATTGTCTTCCCCGTGAGGGTTTT 11140883 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 11140882 CACGAAGATCTGCAT 11140868 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || |||||||| || || || | Sbjct 13311621 GACTCCTTCTGGATGTTGTAGTCTGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCG 13311562 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 13311561 AAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 13311502 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||| | || | || || || |||| || || Sbjct 13311501 TTGTCAATGGTGTCGGAGCTCTCCACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTA 13311442 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 13311441 ACGAAAATCTGCAT 13311428 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || | | ||| || | || || |||| Sbjct 13310937 GACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCGTCTTCCAACTGCTTGCCGGCG 13310878 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| || |||||||| || || || || || ||| | || | |||| Sbjct 13310877 AAGATAAGCCTCTGCTGATCCGGAGGGATTCCCTCCTTATCC-TGAATCTTGGCCTTAAC 13310819 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | |||||||| ||||||||||| || | || || || || ||||||| Sbjct 13310818 GTTGT-CGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTTT 13310760 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 13310759 TCACGAAGATCTGCAT 13310744 >seq5 Length=23960834 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||| || || | ||| | | |||||||| ||||||||||||||| Sbjct 16975303 GCCTCCACGCAGACGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGC 16975244 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| ||||| | || || |||| | |||| | |||||| ||||| || || Sbjct 16975243 CAATGTACGACCATCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGG 16975184 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| || || || | | || | |||||||| |||||| Sbjct 16975183 GATTCCCTCCTTGTCCTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCAC 16975124 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | ||| || || || | || || ||||| ||||||||| Sbjct 16975123 CTCGAGTGTGATCGTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCATG 16975075 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | |||||| || || || | | | |||||||| || |||||||||||| Sbjct 16975532 AGCCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGG 16975473 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | || || ||||| || || || || | |||| |||||||| ||||| |||| Sbjct 16975472 CTAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAG 16975413 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || ||||| ||||| ||| || || | | || | ||||| | ||| | Sbjct 16975412 GGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATCGTGTCCGAGCTCTCGA 16975353 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||| | || | || |||||||||| || || ||||| || |||||| || Sbjct 16975352 CCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCATGCCT 16975300 >seq8 Length=21613650 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | |||||| || || || | | | |||||||||||||||||||||||| Sbjct 12585476 AGCCACCGCGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGG 12585417 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | || || ||||| || || || || | |||| |||||||| ||||| |||| Sbjct 12585416 CAAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAG 12585357 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || |||| ||||| ||| || || | | || | |||||| | ||||| Sbjct 12585356 GGATGTCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCA 12585297 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTT-TTTACAAAAATCTGCAT 138614 |||| | || | || || || || | |||| || ||||| |||||||| Sbjct 12585296 CCTCCAGTGTGATGGTCTTTCCGGTTA-AGTTCTTGACAAAGATCTGCAT 12585248 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | |||||||| || ||||||||||| | Sbjct 12585246 CCTCCACGCAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 12585187 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || || || || |||| |||| | | ||| ||||||||||| Sbjct 12585186 AGAGTTCTACCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 12585127 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | ||||||| ||| ||| Sbjct 12585126 ATCCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTGTCGATTGTGTCGGAACTCTCGACC 12585067 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || || |||| || || || || |||||||| Sbjct 12585066 TCAAGGGTGATCGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 12585020 >seq1 Length=28635137 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | |||||| || || || | | |||||||| ||||||||||| || Sbjct 22221419 GCCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCAGC 22221478 Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 || || | || | || || | ||| || || | |||| || | ||| ||||| |||| Sbjct 22221479 CAAGGTCCTGCCA-TCTTCCAATTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCGGGAG 22221537 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | ||||| || ||||| |||||| ||| | | || | |||||||| ||||| Sbjct 22221538 GAATACCCTCCTTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCA 22221597 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||| | ||| | ||| || || |||| ||| || || || || |||||| || Sbjct 22221598 CCTCTAGCGTGATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCATGCCT 22221650 >seq10 Length=17599535 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| ||| | || | | |||||||| || || ||||| || Sbjct 17168363 CCACCACGAAGACGCAGAACAAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCG 17168304 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || ||||||| |||| || | ||| ||||||||||| Sbjct 17168303 AGTGTGCGTCCATCCTCTAGCTGCTTACCGGCGAAGATAAGCCTCTGCTGGTCCGGAGGA 17168244 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| ||| || || | | || | ||||||| ||| ||| Sbjct 17168243 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCAACC 17168184 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||||| ||| || ||||| |||||||| Sbjct 17168183 TCGAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 17168137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496012724183280