Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9 145 7e-30 seq8 138 1e-27 seq5 132 5e-26 seq6 127 2e-24 seq10 125 7e-24 seq1 123 2e-23 seq3 120 3e-22 seq26880 86.0 6e-12 >seq9 Length=37155481 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||||| || ||||| ||||| ||| | Sbjct 16984016 CCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCA 16984075 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || |||||| |||| | |||||||| || ||||| Sbjct 16984076 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 16984135 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| |||||| ||||| | || | |||||||| ||||| || Sbjct 16984136 ATCCCTTCCTTGTCTTGGATTTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACC 16984195 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || || ||||| ||||| || ||||| ||||||||| Sbjct 16984196 TCAAGTGTGATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATG 16984243 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || ||||||||||| | || ||||| || ||||| ||||| || || Sbjct 16984244 CCACCACGCAGACGTAACACCAAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 16984303 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || || || ||||||| | |||||| || ||||| Sbjct 16984304 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGA 16984363 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| ||| || ||| | |||| || | |||||| | |||||| || Sbjct 16984364 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTG-TCAATGGTGTCGGAACTCTCCAC 16984422 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| ||||| || ||||| |||||||| Sbjct 16984423 CTCTAGAGTAATGGTCTTACCGGTAAGAGTCTTGACAAAGATCTGCAT 16984470 Score = 134 bits (148), Expect = 1e-26 Identities = 162/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| ||||| || | |||||||| || || ||||||||||| | | || | Sbjct 16984484 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCGAGGGTTCTGCCG 16984543 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || ||||| ||||||| |||||||| |||||||| || ||||||||| Sbjct 16984544 TCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCCTTG 16984603 Query 127019 TCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 || ||| || |||| | |||| |||| |||||| | ||||| || |||| || | Sbjct 16984604 TCTTGGATCTT-AGCTTTAACGTTG-TCGATGGTGTCGGAGCTCTCCACCTCGAGCGTGA 16984661 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || ||||| ||||| || ||||| |||||||| Sbjct 16984662 TCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 Score = 129 bits (142), Expect = 6e-25 Identities = 147/196 (75%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 126918 TAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAG 126977 ||||| |||| || || ||||| || ||| || || ||| || ||||||||||||| Sbjct 26352615 TAGAC-CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAG 26352557 Query 126978 CGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA 127037 || ||||||||||||||||||| ||||| || || || ||||| ||| || ||||| Sbjct 26352556 CGAAGATCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGA 26352497 Query 127038 GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTT 127097 | |||| |||||| | |||||| |||| ||| | || || |||||||| |||| Sbjct 26352496 CATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTT 26352437 Query 127098 TTACAAAAATCTGCAT 127113 | || || |||||||| Sbjct 26352436 TCACGAAGATCTGCAT 26352421 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||| ||||| || | |||||||| || ||||| || || || || Sbjct 16960701 CCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCC 16960760 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || || || ||||||| | ||||||||| ||||| Sbjct 16960761 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCCGGAGGA 16960820 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| |||| || | || || | |||||| || Sbjct 16960821 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTG-TCAATAGTATCTGAACTCTCCAC 16960879 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| | || || || || || ||||| Sbjct 16960880 CTCCAAAGTAATAGTCTTTCCGGTTAATGTCTTAACGAAGATTTGCAT 16960927 >seq8 Length=21613650 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | ||||||||||| || | || ||||| |||||||| ||||| ||| | Sbjct 12585474 CCACCGCGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCA 12585415 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 12585414 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 12585355 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||| | |||||||| ||| || ||||| | || | |||||||| ||||| || Sbjct 12585354 ATGTCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACC 12585295 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTT-TTTACAAAAATCTGCAT 127113 || | || | || || ||||| | |||| || ||||| |||||||| Sbjct 12585294 TCCAGTGTGATGGTCTTTCCGGTTA-AGTTCTTGACAAAGATCTGCAT 12585248 Score = 120 bits (132), Expect = 3e-22 Identities = 163/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | ||| ||| || || || ||||| || | | || | | Sbjct 12585006 CGCAACACCAAGTGGAGATTAGTCTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTACCG 12584947 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| ||| ||||||| | ||||||||| || || ||||| ||||| Sbjct 12584946 TCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGGGAATGCCTTCCTTA 12584887 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || |||| |||| |||| |||||| | || || || |||| ||| | Sbjct 12584886 TCCTGGATCTTGGCTTTGACGTTG-TCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGAT 12584828 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTATTT 127122 ||| || ||||| ||||| || || || |||||||| | ||| || Sbjct 12584827 CGTCTTCCCGGTGAGAGTCTTAACGAAGATCTGCATCGGTTAATT 12584783 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | |||||||| || || || ||||| || ||| || | | Sbjct 12585234 CGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTTCTACCG 12585175 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| ||||||| | |||||| || ||||| || || |||||| Sbjct 12585174 TCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATCCCTTCCTTG 12585115 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || ||| || || | |||| |||| ||||| | ||||||||| || | ||| | Sbjct 12585114 TCTTGGATCTTGGCTTTCACGTTG-TCGATTGTGTCGGAACTCTCGACCTCAAGGGTGAT 12585056 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || ||||||| || || || || |||||||| Sbjct 12585055 CGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 12585020 >seq5 Length=23960834 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||||| || || || ||||| ||| | Sbjct 16975530 CCACCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCT 16975471 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 16975470 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 16975411 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| |||||||| ||| || ||||| | || | ||||||| |||||||| Sbjct 16975410 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATCGTGTCCGAGCTCTCGACC 16975351 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || || || |||| || || ||||| || |||||| || Sbjct 16975350 TCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCATGCCT 16975300 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 || ||||| | ||| | || ||||| || ||||| ||||| ||| ||| || ||| | Sbjct 16975290 CGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGCCAATGTACGACCA 16975231 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || | ||| || || || ||||||| |||||||| ||||| || || ||||||||| Sbjct 16975230 TCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGGGATTCCCTCCTTG 16975171 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| || || ||||| | |||| |||||| | ||||| || |||| || | | Sbjct 16975170 TCCTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGATC 16975111 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || || || | || || ||||| ||||||||| Sbjct 16975110 GTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCATG 16975075 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||||| || ||||| || || || ||||||||| | | || | || || ||||| Sbjct 16975051 ATGTAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCTCCCGTCCTCGAGCTG 16974992 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 ||||| ||| |||| | | ||||||||| ||||| ||||||||||||| | ||| | | Sbjct 16974991 CTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTGT-CTTGAATCT 16974933 Query 127030 CTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 |||| | ||| |||| |||||| | || || || || | ||| | ||| || || Sbjct 16974932 TGGCTTTAACATTG-TCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCC 16974874 Query 127088 GTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || || | ||| || ||||| Sbjct 16974873 GTTAAGGTCTTGAAAAAGATATGCAT 16974848 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||||| || ||||| || || | ||||||||| | | || | || || ||||| Sbjct 16974823 ATGTAGAGTCGACTCCTTCTGGGTGTTGTAATCGGCTAGGGTTCTCCCCTCCTCGAGCTG 16974764 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 ||||| ||| ||| | | ||||||||| ||||| || |||||||||| | ||| | | Sbjct 16974763 CTTTCCGGCGAGGATGAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGT-CTTGAATCT 16974705 Query 127030 CTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 |||| | ||| |||| |||||| | || || || || | ||| | ||| || || Sbjct 16974704 TGGCTTTAACATTG-TCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCC 16974646 Query 127088 GTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || |||||||| Sbjct 16974645 GTGAGTGTCTTAACGAAGATCTGCAT 16974620 >seq6 Length=26286742 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||| ||||| || || || ||||| ||| | Sbjct 15797866 CCACCACGGAGACGGAGGACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCT 15797807 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 15797806 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 15797747 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| |||||||| ||| || ||| | ||||| | | ||||| | ||||| || Sbjct 15797746 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGT-CAATAGTGTCGGAGCTCTCCAC 15797688 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||| |||||||||| || || || |||||||||||| Sbjct 15797687 CTCAAGCGTGATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCATG 15797639 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||| |||| || | ||||||||| || || ||||||||||| || Sbjct 15796498 CCTCCACGTAGACGCAAGACCAGGTGAAGCGTAGACTCCTTCTGGATATTGTAATCAGCC 15796439 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || | ||| ||||| ||| |||| | | ||||||||| ||||| Sbjct 15796438 AAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGA 15796379 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||| ||||||||| ||| | | |||| | |||| |||| |||||| | || || | Sbjct 15796378 ATGCCTTCCTTGTCC-TGAATCTTGGCTTTAACGTTG-TCGATGGTGTCAGAGCTTTCCA 15796321 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | || || ||||| || ||||| ||||| |||||||| Sbjct 15796320 CCTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 15796272 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || ||| || ||| ||| || |||||||| ||| Sbjct 15796924 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCAAGCTGTTTGCCA 15796865 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||| |||||||| ||| || ||| Sbjct 15796864 GCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTC 15796805 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| | | ||||| | ||||| || || | || | ||| |||||||||| || Sbjct 15796804 ACGTTGT-CAATAGTGTCGGAGCTCTCCACCTCAAGCGTGATCGTCTTGCCGGTCAATGT 15796746 Query 127096 TTTTACAAAAATCTGCATG 127114 || || |||||||||||| Sbjct 15796745 CTTAACGAAAATCTGCATG 15796727 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || |||||||| || || ||||| ||| | Sbjct 18962237 CCACCACGGAGACGCAACACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGCT 18962178 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || |||||| |||| | |||||||| || ||||| Sbjct 18962177 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 18962118 Query 127007 ATGCCCTCCTTGTC 127020 ||||| |||||||| Sbjct 18962117 ATGCCTTCCTTGTC 18962104 >seq10 Length=17599535 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || ||||||||||| | | ||||| ||| |||||||| || || Sbjct 17168105 GTAGACTCCTTCTGGATATTGTAATCAGCGAGTGTGCGTCCATCCTCTAGCTGCTTACCG 17168046 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | |||||| || ||||| || || ||||||||| ||| || |||| Sbjct 17168045 GCGAAGATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTG 17167986 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||||| |||| || | || |||||||| || ||| Sbjct 17167985 ACGTTATCGATGGTGTCAGAGCTCTCGACCTCGAGAGTAATGGTCTTGCCGGTGAGCGTT 17167926 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||| ||||| Sbjct 17167925 TTCACGAAAATTTGCAT 17167909 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || ||||||||||| | | ||||| ||| |||||||| || || Sbjct 17168333 GTAGACTCCTTCTGGATATTGTAATCAGCGAGTGTGCGTCCATCCTCTAGCTGCTTACCG 17168274 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | |||||| || ||||| || || ||||||||| ||| || |||| Sbjct 17168273 GCGAAGATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTG 17168214 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||| | ||||| || |||| ||| | || ||||| |||| ||| Sbjct 17168213 ACGTTG-TCAATAGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAAGT 17168155 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 17168154 CTTGACAAAGATCTGCAT 17168137 >seq1 Length=28635137 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||| ||||| || | ||||||||| || ||||| |||||||| || Sbjct 22221420 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCAGCC 22221479 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || |||||| |||| | | |||||| |||||||| Sbjct 22221480 AAGGTCCTGCCATCTTCCAATTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCGGGAGGA 22221539 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| |||||| || | |||| || | |||||| | |||||| || Sbjct 22221540 ATACCCTCCTTGTCCTGGATTTTGGCTTTCACGTTG-TCAATGGTGTCGGAACTCTCCAC 22221598 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | ||| || || |||| ||| || || || || |||||| || Sbjct 22221599 CTCTAGCGTGATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCATGCCT 22221650 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | | || | ||| || | ||| || || Sbjct 22221906 GTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCTTCCATCCTCCAACTGCTTGCCG 22221965 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || || |||||||| ||| ||| || ||| Sbjct 22221966 GCAAAGATGAGCCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTA 22222025 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||| || | || || || || | || | ||| || ||||||||||| Sbjct 22222026 ACGTTGT-CGATGGTATCGGAGCTTTCAACCTCCAAAGTGATCGTCTTTCCGGTCAGAGT 22222084 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| ||||| |||||||| Sbjct 22222085 TTTAACAAAGATCTGCAT 22222102 >seq3 Length=31725688 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || || || ||||| || ||| |||||| ||| || Sbjct 13311636 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCCAAGGTGCGACCATCCTCG 13311577 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| ||||||||| |||| | |||||||| || ||||| ||||| |||||||| | Sbjct 13311576 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGG 13311517 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | ||||| | | |||||| | ||||| || || | || | || || Sbjct 13311516 ATCTTGGCCTTCACGTTGT-CAATGGTGTCGGAGCTCTCCACCTCAAGTGTGATGGTCTT 13311458 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || || || ||||||||||| Sbjct 13311457 GCCGGTCAAGGTCTTAACGAAAATCTGCAT 13311428 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || |||||||| | || | || | || | || ||||| || || || ||||| ||| Sbjct 11141097 GCGCCACCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 11141038 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||||| ||||||||| || ||| Sbjct 11141037 GCGAGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGA 11140978 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||| ||||||||| ||| || ||||| | |||| |||||| | |||| Sbjct 11140977 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCG 11140918 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| ||| | || || || || || ||||| || || |||||||| Sbjct 11140917 ACTTCGAGGGTGATTGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCAT 11140868 >seq26880 Length=258 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | ||||||||| || ||||| |||||||| ||| || | ||| || Sbjct 142 ACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCAGCCAAGGTCCTGCCATCTTCC 83 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | || || |||||| |||| | | |||||| |||||||| || |||||||||||| | Sbjct 82 AATTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGG 23 Query 127025 ATTTT 127029 ||||| Sbjct 22 ATTTT 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475261569603760