Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq40249 682 0.0 seq24705 659 0.0 seq27683 242 5e-59 seq13684 161 1e-34 seq10 140 4e-28 seq3029 98.7 1e-15 seq34986 91.5 2e-13 seq9 89.7 6e-13 >seq40249 Length=153482 Score = 682 bits (756), Expect = 0.0 Identities = 747/993 (75%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 7528 CTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCAT 7587 |||| ||||||| ||||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct 350 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 409 Query 7588 GCCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATC 7647 ||||| ||||||||| | | || ||||| || || | ||||| ||||||| ||| Sbjct 410 ACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATC 469 Query 7648 AATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAG 7707 || | || |||||||| |||||||| || |||||||| ||||| || |||| ||| | Sbjct 470 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAA 529 Query 7708 AGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGA 7767 |||||| ||||| || || || || ||||| || || | |||||| || | ||||| || Sbjct 530 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 589 Query 7768 GTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGAT 7827 |||||||| ||| ||||||||||||| || ||||| || ||||||||||| || || Sbjct 590 ATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAAT 649 Query 7828 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGT 7887 |||||| || ||||||||||||||||| | ||||| | || || ||| || || Sbjct 650 GTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 709 Query 7888 GGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACC 7947 |||||| | | || | ||| ||||| | ||||||||||| ||||| || || || || Sbjct 710 GGTTTCCCTGATCAAACTAGAAGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCC 769 Query 7948 ACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGC 8007 || || |||||||| || || | |||||| || |||||||| || ||||||||||| || Sbjct 770 GCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGC 829 Query 8008 TTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAA 8067 ||||| |||| ||| ||||||| ||||||||||| || ||||||||| | ||||| || Sbjct 830 CTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAA 889 Query 8068 AGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGA 8127 | |||||||| | || |||| | ||| ||||||| || || ||||| ||||| || Sbjct 890 ACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGA 949 Query 8128 GTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACC 8187 ||||| ||| ||||| ||||||||||| |||||| || |||||||||||||||||| Sbjct 950 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 1009 Query 8188 CATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTT 8247 ||| || | | ||| | | ||||| | | || |||| ||||||||||||| Sbjct 1010 CATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 1069 Query 8248 GTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGC 8307 ||| ||||| ||||||| || || ||||||||||| || || || || | ||||||||| Sbjct 1070 GTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAGC 1129 Query 8308 GTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGC 8367 ||||| ||||| || ||||| || || || ||||| || || | || || |||| Sbjct 1130 TGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGA 1189 Query 8368 GACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA 8427 || |||||||| || || ||||| || || ||||||||||| | ||| |||| || || Sbjct 1190 AACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAA 1249 Query 8428 ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAG 8487 | || || | | | ||||| ||||||| ||||| ||||| || | || || Sbjct 1250 AACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1309 Query 8488 ACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 ||| || | || |||| |||||||||||| Sbjct 1310 ACGGTTTTCAGTACTAGTTATCCAGTTACAGAA 1342 Score = 563 bits (624), Expect = 1e-155 Identities = 735/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | || || ||||| |||| || ||||||||| || ||||| Sbjct 32947 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 32888 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| || || | |||||| || || || || || || |||||||| ||| Sbjct 32887 TGAGCCGCCATCCAAGCGCGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 32828 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| |||||||| || | ||| Sbjct 32827 TCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 32768 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || | || ||||| | | |||| | |||| | ||| | || || ||||| Sbjct 32767 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACTGGTACAAAT 32708 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| |||||| |||||| || || | |||||||| || ||||| Sbjct 32707 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 32648 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| |||||||| ||||| || || || |||| || || | ||| || | Sbjct 32647 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 32588 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct 32587 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 32528 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || | || || | || | | ||| || || |||||||||||||| ||||| | Sbjct 32527 GCGCATAACAGAGCCGCGCCCAGTACACCAGCGACTCCCATCATATGAAATGGGTTCAAT 32468 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||||| | ||| || ||||| || || |||||||| Sbjct 32467 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 32408 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 |||||||||||||||| || || || || ||||| || ||||||||||| ||||| Sbjct 32407 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGAAAGACAGAAACAAAA 32348 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 |||||||| |||||||| || ||||||||||| || || || | | || ||| || || Sbjct 32347 ACAGCAATTGGACCAGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGAGC 32289 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | ||| |||||||| | || || || |||||||| || ||||| Sbjct 32288 AAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCACCGTGGAGAGCAACAAA 32229 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| ||| || |||||||| || ||||| |||||||| Sbjct 32228 AGCCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 32169 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 || | | | ||||| | | | | ||||||||| || || ||||| || | || Sbjct 32168 CAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAA 32109 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 ||| || || || | ||| ||| ||| | || ||||| ||||| || || || || Sbjct 32108 ATTGCAACCTTCTAAATAGGAACTAGCCAATCCATGAGTATACCATGAAGTTACAAAGGT 32049 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 ||| || |||| |||||| |||| || | || ||| ||| || || | ||||| || Sbjct 32048 TGTACCTGTGAACCAACCCCCCAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACCAGA 31989 Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275 |||||| ||||||||||| | || | | | ||||||||| | | |||||| Sbjct 31988 CCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 31935 >seq24705 Length=1162 Score = 659 bits (730), Expect = 0.0 Identities = 733/974 (75%), Gaps = 3/974 (0%) Strand=Plus/Minus Query 7548 GAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGACCAGCACGGTTGA 7607 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| Sbjct 1162 GAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGGTTAGCACGGTTGA 1103 Query 7608 GCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATGGACTGGTTGAAGT 7667 | || ||||| || || | || |||||||||| ||||| | || |||||||| | Sbjct 1102 TGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGATTGGTTGAAAT 1043 Query 7668 TGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGAACCAGATGCCAA 7727 ||||||| || |||||||| ||||| || |||| ||| | ||||||||||||||| || | Sbjct 1042 TGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAGATTCCTA 983 Query 7728 CAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATT 7787 | || ||||| || || | ||||||||| | ||||| ||||||||||| ||| |||| Sbjct 982 CTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATT 923 Query 7788 GGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTT 7847 ||||||| | || ||||| || || |||||||| || || || || || ||||| |||| Sbjct 922 GGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTTTCTTCCTCTT 863 Query 7848 GACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGAACCAGAGAAG 7907 |||| || || ||||| | || || ||| ||||| ||||| | | || | || Sbjct 862 GACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGA-CAAACTAG 804 Query 7908 AGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGACACCAGCGACGC 7967 | ||||| | ||||||||||| ||||| || || || || || || |||||||| || | Sbjct 803 AAGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACAC 744 Query 7968 CCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGACAAGCATGTAGT 8027 | | |||||| || |||||||| || ||||||||||| || ||||| |||| ||| ||| Sbjct 743 CTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATCATAAAGT 684 Query 8028 TGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCTTGACCGAAAGGAT 8087 |||| ||||||||||| || | ||||||| | ||||| || |||||||| | ||| | Sbjct 683 TGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCTTCCTTGACCAATAGGGT 624 Query 8088 AGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCAGG 8147 | | | ||| ||||||| || || ||||| ||||| || ||||| ||| ||||| | Sbjct 623 AAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAG 564 Query 8148 GACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTATGCATAGATACCGA 8207 |||||||||| |||||| || ||||||||||||||||||||| || | | ||| | Sbjct 563 GACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAA 504 Query 8208 TCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGCCACTCATCAAGAG 8267 | | |||| | | || || | |||||||||| ||||| | ||||||||||| || Sbjct 503 GTAAGGAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCACTCATCAACAG 444 Query 8268 AAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAAGAAGGAACAACAG 8327 | || |||||||| || || || ||||| | || || || ||||| ||| | || || Sbjct 443 ATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGTAGGGATAATAG 384 Query 8328 CACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGTTCACGGATGCCGT 8387 |||||||||| || ||||| ||||| | | ||||||| || || ||||| || || | Sbjct 383 CACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCAT 324 Query 8388 CAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAATAGCAGCAGCGAGC 8446 |||| || || ||||| ||||||| ||| |||| || || ||| | || || | | Sbjct 323 CAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAGA-AGTTGCGGTCAAT 265 Query 8447 AGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATTGTTGGTGGAGGTT 8506 | ||||| ||||||| ||||||||||| |||| || |||||||| | ||| ||| Sbjct 264 AAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGTGCTAGTT 205 Query 8507 ACCCAGTTACAGAA 8520 | |||||| ||||| Sbjct 204 ATCCAGTTGCAGAA 191 >seq27683 Length=354 Score = 242 bits (268), Expect = 5e-59 Identities = 265/352 (75%), Gaps = 0/352 (0%) Strand=Plus/Plus Query 6527 TTATTGCTGAAGGCGATACCAAAGATCTGAGACCAGAAACGATTAGCCGTGACCATCGAA 6586 |||||| || || | ||||||||| || ||||| || || ||||| |||||||| ||| Sbjct 3 TTATTGGAAAAAGCAACACCAAAGATTTGGGACCAAAAGCGGTTAGCAGTGACCATGGAA 62 Query 6587 TAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCT 6646 || || || || |||| || || | ||| || ||| ||||||| ||||| || Sbjct 63 TAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAAGGTATTTGCACCATCACCGTCC 122 Query 6647 TCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAG 6706 ||||| | ||| || ||||| || || || |||||||| || |||| || ||||||| Sbjct 123 TCAAATAGAGTGTTTTCTACGGTCGCTCCATGAATAGCGCATAGCAGAGCCGCACCTAAT 182 Query 6707 ATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCCCTGTAGG 6766 | || || || |||||||||||||| ||||| | |||||| || || || || || | | Sbjct 183 ACTCCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAG 242 Query 6767 AAGAGTAAGAAGCGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGAC 6826 || || | ||| || ||||||||||| || ||||| ||||||||||||||||| || Sbjct 243 AAAAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGAT 302 Query 6827 TGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAATGGGACCAG 6878 || || || ||||| || || || ||||| ||||| |||||||| ||||||| Sbjct 303 TGCCCCAGTGGATAAATAAGGAATACAGAAACAAAAACAGCAATTGGACCAG 354 >seq13684 Length=3594 Score = 161 bits (178), Expect = 1e-34 Identities = 193/262 (74%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | || || ||||| |||| || |||||||| || |||||| Sbjct 262 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 203 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||||| ||||| | ||| || || || || || || ||||| ||||| ||| Sbjct 202 TGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 143 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || |||||||||||||| || | | | Sbjct 142 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGGCACGTAAG 83 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || | |||| | ||||| | |||| | ||| | || || ||||| Sbjct 82 TTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAAT 23 Query 6503 AGCATAAAGAAATGTAGCCAAC 6524 |||||||||||||||| ||||| Sbjct 22 AGCATAAAGAAATGTAACCAAC 1 >seq10 Length=17599535 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 7814 TGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGG 7873 ||||||| || |||||||| || ||||||||||||||||| |||||| | ||| Sbjct 16803357 TGAGCAGTTACAATGTTGTAAGTTTCTTCTTCTTGACCGAATCTATAACTTTCGTTAGCA 16803298 Query 7874 GACTCAGACTCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCA 7933 || ||| | ||||||| | || | | ||| ||||| | |||||| ||| || Sbjct 16803297 GATTCATTTTTTGTGGTTTTCCTAATTAAACTAGAAGTTACCAAAAAACCATACATAACA 16803238 Query 7934 CTGAACAGAGAACCACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGG 7993 || || | ||||||| || |||||| | || || | ||||| || |||||||| || Sbjct 16803237 CTAAATAAGGAACCACTGAATACACCAACTACACCTAATATGTGAAATGGGTGCATAAGA 16803178 Query 7994 ATGTTGTGCTCTGCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGAT 8043 ||||||||||| || |||| |||| ||| ||||||| ||||||||||| Sbjct 16803177 ATGTTGTGCTCAGCCGGGAATACAATCATAAAGTTGAAAGTACCAGAGAT 16803128 >seq3029 Length=7874 Score = 98.7 bits (108), Expect = 1e-15 Identities = 172/248 (69%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 7017 AATCTCCCTGAGCTTCTGGACCCCATAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAG 7076 ||||||| || ||||| || |||||||| || | | || ||| | | | | |||| Sbjct 1 AATCTCCTTGTGCTTCGGGCCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAG 60 Query 7077 GAGTTGATACAGCAGCAGTAAGGAAATTACATCCCTCAAGATACGAAGAAGCAATCCCGT 7136 | || || || || || || | ||||||||| || || | ||| ||| ||| | || | Sbjct 61 GGGTAGAAACTGCTGCGGTTAAGAAATTACAACCTTCCAAATAGGAACTAGCCAATCCAT 120 Query 7137 GAGTGTACCAGCTCGTGACGAAAGTTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAG 7196 | || ||||| || || |||||||| || || | |||||| || | || | |||| Sbjct 121 GGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAG 180 Query 7197 CAGTAGGGAACAGAAGAAGACCTGACCAACCAACAAAAACGAACCTATCAC-GCTTAAGC 7255 || ||| || || | || || ||||| || ||||||||||| | || | | ||| | Sbjct 181 CACAAGGAAAGAGCAATAGGCCAGACCATCCTACAAAAACGAAACGGTCCCTTCGTAA-C 239 Query 7256 CAGTCATC 7263 |||||||| Sbjct 240 CAGTCATC 247 >seq34986 Length=93546 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 10253 GATAAGAAACACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATT 10312 |||||| |||| || |||| ||| || | | |||||||||||||| ||||| | Sbjct 33680 GATAAGCCGCACAAGTGAGAACGAATCCTTCCGCAATCTGGTCATCATCGAGGAAACTCT 33621 Query 10313 GATCGCTTTGATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAG 10372 | || || || || | || || | | ||| |||||||| ||||| |||| ||||| Sbjct 33620 GGTCAGACTGGTCAACAGATCCAGACACAACTTTACCTGCACAGCTCGAGCAGGAACCAG 33561 Query 10373 CTCGGCACGAGTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGAT 10432 | ||||| ||||| | ||| || || ||||| |||||||| || || | ||| | Sbjct 33560 CACGGCAAGAGTAAGGCAAGTCGATTCCGGCTTCCTCAGCAGCGTCAAGGACGTAGACGT 33501 Query 10433 CGTCAGCACACTCAA 10447 |||| | ||||||| Sbjct 33500 CGTCGTCGCACTCAA 33486 >seq9 Length=37155481 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 10249 GTGGGATAAGAAACACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAAC 10308 || ||||||| |||| || |||| || || ||| | |||||||||||||| ||||| Sbjct 8544476 GTAGGATAAGCCGCACAAGTGAGAACAAACCCTGCAGCAATCTGGTCATCATCGAGGAAA 8544535 Query 10309 GATTGATCGCTTTGATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCA 10368 || || || || || ||| || | | ||| |||||||| ||||| || | | Sbjct 8544536 CTCTGGTCAGACTGGTCAACAAAACCAGACACAACTTTACCTGCACAGCTCGAGCAAGAA 8544595 Query 10369 CCAGCTCGGCACGAGTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTAC 10428 || || ||||| ||||| | ||| || |||||||| || ||||| || || | ||| Sbjct 8544596 CCGGCACGGCAAGAGTAAGGCAAGTCGATCCCTGCTTCCTCCGCAGCGTCGAGGACGTAA 8544655 Query 10429 TGATCGTCAGCACACTCAA 10447 ||||| | ||||||| Sbjct 8544656 ACGTCGTCGTCGCACTCAA 8544674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621811801236560