Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07]
40,249 sequences; 284,129,391 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 241 1e-58
seq6 217 1e-51
seq7 158 1e-33
seq4 149 6e-31
seq9 143 3e-29
seq3 136 4e-27
seq10 114 1e-20
seq5 109 5e-19
seq8 100 3e-16
seq1 96.9 3e-15
>seq2
Length=27864329
Score = 241 bits (266), Expect = 1e-58
Identities = 394/562 (70%), Gaps = 13/562 (2%)
Strand=Plus/Minus
Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948
|||| ||| || |||||||| || | ||| ||||||| || || || |||||| |||
Sbjct 22153590 ATCAGGCACGCGAAGTCGCAGTGAAGGCCTTCGTCCCGCGAGATCAGCTCGTTGGAGAAG 22153531
Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008
|| | || |||||||| || || || |||||||| || |||| | ||| || || ||
Sbjct 22153530 GTGAGCCCCGGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTTCCGGAG 22153471
Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068
||||||| || || ||| |||||| ||||| | | ||| |||| || || |
Sbjct 22153470 AAGAAGATCCCTTCCACGCACGCGAAGGCCACGATCCTCTCTGCGAAAGT--CTGAGATC 22153413
Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATG 133128
| ||||||| || ||||||| |||||| | |||||| || || || || ||
Sbjct 22153412 CAT-CGATCCACTTCAAGGCCCATTGGGCCTTCTTCGCGACGCAAGGGATGGTCTCAATC 22153354
Query 133129 GCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGAT---GAGGGTC 133185
||| || | | || |||| | | | |||||| || | |||| |
Sbjct 22153353 GCGCGGAAGAGATGGTCCCTCTCCTTGTTGTCCTTGATGTAGGTATCTAGCAAGAGGCTG 22153294
Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245
||||| |||||||| | ||||| || ||||| || || ||||| ||| ||||||
Sbjct 22153293 ---TACATCTCCGAGTGGATATTCTCAATCGCGATCTGGAACCCGTAGAAGGCACGCGCC 22153237
Query 133246 TCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305
||| |||||||| || ||| || | | ||||| ||| |||||| ||||||
Sbjct 22153236 TCGGAGACCTGCACGTCGGACATGAACCGGGAGGCGAGATTCTCGAGGACGATTCCGTCG 22153177
Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG- 133364
||||||||| ||||| || ||||| |||||||| ||||||||| |||||| | |
Sbjct 22153176 GAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCGCCGTCGTTGAGGTTG 22153117
Query 133365 --CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCC 133422
|||||||||||| ||||| | ||| ||||| || |||||| ||||||| || || ||
Sbjct 22153116 GTCTCCCAGTCGCGGGTGTCTTGGGAGAGGTCGACTTCCTCGGCGGTCCAGAAGGAGGCT 22153057
Query 133423 TCGGCTTTTTTGTACATACTCC 133444
|||||||| |||||||| ||||
Sbjct 22153056 TCGGCTTTCTTGTACAT-CTCC 22153036
>seq6
Length=26286742
Score = 217 bits (240), Expect = 1e-51
Identities = 412/603 (68%), Gaps = 4/603 (1%)
Strand=Plus/Minus
Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948
|||| ||| || |||||||| || | ||| ||||| | || || | |||||| |||
Sbjct 22599664 ATCAGGCAGGCGAAGTCGCAGTGAAGGCCTTCGTCTCGAGAGATCAACTCGTTGGAGAAG 22599605
Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008
|| || || |||||||| || || || || ||||| || |||| | ||| || || ||
Sbjct 22599604 GTTAAACCCGGCATGAGCCCTCGCTTCTTCAGCCAGAAGATGGAGCAGAAGCTTCCGGAG 22599545
Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068
||||||| || || ||| || || ||||| | | |||| |||| || || |
Sbjct 22599544 AAGAAGATCCCTTCCACGCAAGCAAACGCCACGATCCTCTCGGCGAAAGT--CTGAGATC 22599487
Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATG 133128
| | ||||||| || ||||||| |||||| | |||||| || || ||||| ||
Sbjct 22599486 C-GTCGATCCACTTCATGGCCCATTGGGCCTTCTTCGCGACGCAAGGGATGGTTTCAATC 22599428
Query 133129 GCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAA 133188
||| || | || |||||| | | ||| ||||||| |||
Sbjct 22599427 GCGCGGAAGAGGTGGTCCCTCTCTTTGTTGTCCTTGATGTACGTGTCGAGCAGGAGGCTG 22599368
Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248
||||| || ||||| | ||||| || ||||| || || ||||| ||| |||||||||
Sbjct 22599367 TACATCTCTGAGTGGATATTCTCAATCGCGATCTGGAACCCGTAGAAGGCACGCGCCTCG 22599308
Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308
|| ||||| || ||| || | | ||||| || ||||| |||||| |
Sbjct 22599307 GAGACTTGCACGTCGGACATGAACCGGGAGGCGAGATTCTCTAAAACGATTCCGTCGGAG 22599248
Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368
|||||||| ||||| || ||||| |||||||| |||||||| |||||| | ||||
Sbjct 22599247 GCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCTCCGTCGTTGAGATTCTCC 22599188
Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428
|||||||| ||||| | || || || || || ||| ||||||| || || ||||||||
Sbjct 22599187 CAGTCGCGAGTGTCTTGCGAGAGATCGACTTCTTCGGCGGTCCAGAAAGAGGCCTCGGCC 22599128
Query 133429 TTTTTGTACATACTCCACATGTCCGAATATTGTAT-GGGAAAAATCACAAACCGGCGGGG 133487
|| |||||||| ||| || | || || || || ||||| | || || | | | |||
Sbjct 22599127 TTCTTGTACATCTCCCAGATCTGCGGTTAGTGGATCGGGAACATGCAGAATCTGTCTGGG 22599068
Query 133488 GTT 133490
|||
Sbjct 22599067 GTT 22599065
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || || ||||| | || || ||| ||
Sbjct 15796500 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTCC 15796559
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| ||||||| ||||||||||| ||||| | |||||
Sbjct 15796560 GACACCATTGACAACG-TGAAAGCCAAAATCCAGGACAAAGAGGGTATTCCTCCAGACCA 15796618
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||| ||||||||||| || || | || || | ||||||||
Sbjct 15796619 GCAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAA 15796678
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | || || || ||||||||
Sbjct 15796679 CATCCAGAAGGAGTCTACTCTCCACTTGGTGCT 15796711
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| || ||||| | || || ||| | ||
Sbjct 15797640 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTCC 15797699
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| ||||| || || || || | |||||
Sbjct 15797700 GACACTATTGACAACG-TGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCA 15797758
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | |||||| | |||||||||
Sbjct 15797759 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTAGCCGACTACAA 15797818
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | ||||| || ||||| || |||
Sbjct 15797819 CATCCAGAAGGAGTCCACGCTTCACTTGGTCCTCCGT 15797855
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || || || || || ||||| |||||||| | || || ||| |
Sbjct 15797412 ATGCAGATATTTGTGAAGACCCTTACCGGCAAGACCATCACATTGGAGGTTGAGAGTTCG 15797471
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| ||||| || || || || | |||||
Sbjct 15797472 GACACTATTGATAAAGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 15797531
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| ||||||||||| || || | || || | |||||||||
Sbjct 15797532 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAAC 15797591
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
||||| ||||| | || || || ||||||||
Sbjct 15797592 ATCCAGAAGGAGTCTACTCTCCACTTGGTGCT 15797623
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| || || || || | ||||| ||||| ||||| | ||| |||||
Sbjct 18962095 AAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAGCAGCGTCTCATCTTCGCTGGCAAG 18962154
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
||||| || || | |||||| | ||||||||||||||| || || | || || ||
Sbjct 18962155 CAGCTTGAGGATGGTCGCACCTTAGCCGACTACAACATCCAGAAAGAGTCCACTCTTCAC 18962214
Query 38448 TTGGTGCTGCGT 38459
|||||| |||||
Sbjct 18962215 TTGGTGTTGCGT 18962226
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| || ||||| | || || ||| | ||
Sbjct 15796728 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTCC 15796787
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| ||||| || || || || | |||||
Sbjct 15796788 GACACTATTGACAACG-TGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 15796846
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||||||||| || || | || || | ||||||||
Sbjct 15796847 GCAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAA 15796906
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | || || ||| | || ||
Sbjct 15796907 CATCCAGAAGGAGTCTACTCTTCATCTCGTCCT 15796939
>seq7
Length=22597724
Score = 158 bits (174), Expect = 1e-33
Identities = 169/221 (76%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| ||||| |||||||| || ||||||||| |||| |||||| |
Sbjct 13483397 AAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGGTCGAGTC 13483456
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
| |||||| | | | |||| | || | || |||| ||||| || || || || | |
Sbjct 13483457 CTCCGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGG 13483515
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||| ||||| | ||| || |||||||| || |||| || |||||| |||||
Sbjct 13483516 ACCAGCAGCGACTCATCTTCGCCGGGAAACAGCTCGAAGACGGCCGTACCCTCGCCGACT 13483575
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||| ||||| ||||||| ||| | || || |||
Sbjct 13483576 ACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGT 13483616
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||||||||| || || || ||||| || ||||| || || || ||| | || ||||| |
Sbjct 8143829 AAAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATC 8143770
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | | || | || || | ||||| || || || || | ||
Sbjct 8143769 ATCCGACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTATCCCTCCGGA 8143710
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | ||| || || |||||||| |||| | | || ||| |||||
Sbjct 8143709 CCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGGAGGACGCTCGCGGACTA 8143650
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| ||||||| || |||||||| || ||||||| ||
Sbjct 8143649 CAACATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGCCTGAGAGGAGG 8143599
Score = 86.0 bits (94), Expect = 6e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954
||||||||||| || || | ||||||||||| ||||| || ||||| |||||||||
Sbjct 4843185 CAAGCAAAGTCACAGTGGAGCCCCTCGTCCCTCGAAATAAGCTCGTTTGAGAAAGTCAAA 4843244
Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014
|| ||||| || || | || |||||||| || ||||| ||| ||| ||||||||
Sbjct 4843245 CCAGGCATAAGACCTCTCTTCTTGAGCCAGAAGATGGCACAGAAGCTGTAAAAAAAGAAG 4843304
>seq4
Length=18984343
Score = 149 bits (164), Expect = 6e-31
Identities = 162/210 (77%), Gaps = 4/210 (2%)
Strand=Plus/Minus
Query 38239 aaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298
|||| ||||| || ||||| ||||| || ||||| ||||| |||||| |||| ||||||
Sbjct 357697 AAAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTCGAGT 357638
Query 38299 CCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357
|| |||||| | | | |||| | || | || |||| ||||| || || || ||||||
Sbjct 357637 CCTCCGACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCAT-CCCGCC 357580
Query 38358 G-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416
| |||| |||||||| || | ||| || || ||||| || |||| | | |||||| |||
Sbjct 357579 GGACCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGAGGACCCTCGCCGA 357520
Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCA 38446
|||||||||||| ||||| ||||||| ||
Sbjct 357519 CTACAACATCCAGAAGGAGTCGACGCTTCA 357490
>seq9
Length=37155481
Score = 143 bits (158), Expect = 3e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || || || ||||| || ||||| ||||| |||||| |||| |||||| |
Sbjct 30362241 AAAGATGCAGATCTTTGTGAAAACCCTTACGGGAAAAACAATCACCCTCGAGGTCGAGTC 30362300
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||||| | | | | | || | || |||| ||||| || || || || ||||
Sbjct 30362301 CTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGA 30362360
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || |||| ||| || || |||||||| |||| ||||| ||| ||||||
Sbjct 30362361 CCAGCAGCGACTGATTTTCGCCGGGAAGCAGCTGGAAGACGGACGCACGCTCGCCGACTA 30362420
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||| ||||| ||||||| ||| | || || | | | | ||||||
Sbjct 30362421 CAACACCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCCTCTCCGTGGCGGC 30362472
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || |||||||| | || || ||| | |
Sbjct 16984242 ATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACCATCACACTTGAGGTGGAGAGCTCG 16984183
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| ||||| || || || || | |||||
Sbjct 16984182 GACACCATTGATAACG-TCAAGGCCAAAATCCAAGACAAGGAAGGGATCCCTCCAGACCA 16984124
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| ||||| || || | |||||||| |||||||||
Sbjct 16984123 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAA 16984064
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| || ||||| | || || || |||||| |||||
Sbjct 16984063 CATTCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGT 16984027
Score = 105 bits (116), Expect = 7e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || ||||| || | || || ||| ||
Sbjct 16960471 ATGCAGATCTTTGTCAAGACACTGACCGGGAAGACCATTACTCTAGAGGTGGAGAGTTCC 16960412
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| ||||||| |||||||| || ||||| | |||||
Sbjct 16960411 GACACCATTGACAACG-TGAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCGGACCA 16960353
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | || ||||| ||||| || || | |||||||| ||||||||
Sbjct 16960352 GCAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACCCTAGCTGACTACAA 16960293
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| || || |||| || || |||||||| |||
Sbjct 16960292 CATCCAGAAAGAGTCGACCCTTCACTTGGTGCTACGT 16960256
Score = 100 bits (110), Expect = 3e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297
|| |||||||| || || || ||||| || ||||| || || || ||| | || |||||
Sbjct 24151084 AAGAAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCTTAGAGGTCGAA 24151025
Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357
| |||||| | | | | || | || || | ||||| || || || ||||||
Sbjct 24151024 TCATCCGACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTAT-CCCGCC 24150966
Query 38358 G-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416
| |||| ||||| || || | ||| || || |||||||| |||| | || ||| ||
Sbjct 24150965 GGACCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGA 24150906
Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||| ||||| |||| || || |||| || ||| |||| || ||
Sbjct 24150905 TTACAACATCCAGAAGGAGTCGACTCTTCACCTGGTTCTCCGTCTGAGGGGAGG 24150852
Score = 100 bits (110), Expect = 3e-16
Identities = 140/195 (72%), Gaps = 1/195 (1%)
Strand=Plus/Plus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| ||||| || || || || ||||||||| |||| |||||| |
Sbjct 26352417 AAAGATGCAGATCTTCGTGAAAACCCTGACCGGGAAGACCATCACCCTCGAGGTCGAGTC 26352476
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||||| | | | | | || | || |||| |||||||| || || || | ||
Sbjct 26352477 CTCCGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGA 26352536
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||||| | || | ||| || |||||||| || || | || || || |||||
Sbjct 26352537 TCAGCAGCGATTGATCTTCGCTGGAAAACAGCTCGAAGATGGCCGTACTCTGGCTGACTA 26352596
Query 38420 CAACATCCA-AAAGG 38433
||||||||| |||||
Sbjct 26352597 CAACATCCAGAAAGG 26352611
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || ||||| || | || || ||| ||
Sbjct 16984470 ATGCAGATCTTTGTCAAGACTCTTACCGGTAAGACCATTACTCTAGAGGTGGAGAGTTCC 16984411
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| |||| | || |||| ||||| || || ||||| | |||||
Sbjct 16984410 GACACCATTGACAACG-TTAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 16984352
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || ||||| ||||| || || | || ||| | ||||||||
Sbjct 16984351 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAA 16984292
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||| || ||||| |||| || ||||||||| | ||| || | || |||
Sbjct 16984291 CATTCAGAAGGAGTCGACTCTTCATTTGGTGTTACGTCTGCGTGGTGGC 16984243
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||||||| | || || || | ||
Sbjct 16984926 ATGCAGATCTTCGTTAAGACTCTCACAGGAAAGACCATCACCCTTGAGGTGGAAAGCTCC 16984867
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || || | ||||| |||||||| || | || ||
Sbjct 16984866 GACACCATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCACCGGATCA 16984808
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| |||| || | ||| || || || || || || | || || ||| ||||||||
Sbjct 16984807 GCAAAGGCTTATCTTCGCCGGGAAGCAACTCGAGGATGGACGTACTCTCGCTGACTACAA 16984748
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| |||| || ||| | || ||
Sbjct 16984747 CATCCAGAAGGAGTCGACCCTTCATCTCGTCCT 16984715
>seq3
Length=31725688
Score = 136 bits (150), Expect = 4e-27
Identities = 147/195 (75%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| ||||| |||||||| || || |||||| |||| |||||| |
Sbjct 11140864 AAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACAATCACCCTCGAAGTCGAGTC 11140923
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||||| | | | | | || | || |||| ||||| || || || || | ||
Sbjct 11140924 CTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGA 11140983
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | ||| || || |||||||| |||| ||||||||| ||||||
Sbjct 11140984 CCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAGGACGGACGCACCCTCGCCGACTA 11141043
Query 38420 CAACATCCAAAAGGA 38434
||||||||| |||||
Sbjct 11141044 CAACATCCAGAAGGA 11141058
Score = 120 bits (132), Expect = 3e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| ||||| || || ||||||||| |||| || ||| | ||
Sbjct 13310744 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 13310803
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| |||| | || || | || || |||||||| || | || ||
Sbjct 13310804 GACACCATCGACAACG-TTAAGGCCAAGATTCAGGATAAGGAGGGAATCCCTCCGGATCA 13310862
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||| ||||| ||| |||| |||| | | ||| | ||||||||
Sbjct 13310863 GCAGAGGCTTATCTTCGCCGGCAAGCAGTTGGAAGACGGGAGAACCTTGGCTGACTACAA 13310922
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | ||||| || ||||| ||
Sbjct 13310923 CATCCAGAAGGAGTCTACGCTTCACTTGGTCCT 13310955
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| |||||||| | || || ||| | ||
Sbjct 13311428 ATGCAGATTTTCGTTAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGAGCTCC 13311487
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || || || | |||||
Sbjct 13311488 GACACCATTGACAACG-TGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCA 13311546
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | |||||| | ||||||||
Sbjct 13311547 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAA 13311606
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||| || |||
Sbjct 13311607 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGT 13311643
Score = 98.7 bits (108), Expect = 1e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || || ||||| | || || ||| ||
Sbjct 13311200 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTCC 13311259
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| ||||||| ||||||||||| ||||| | |||||
Sbjct 13311260 GACACCATTGACAACG-TGAAAGCCAAAATCCAGGACAAAGAGGGTATTCCTCCAGACCA 13311318
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||| ||||||||||| || || | || || | ||||| ||
Sbjct 13311319 GCAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCTGACTATAA 13311378
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| || ||| | || || || |||||||
Sbjct 13311379 CATCCAGAAAGAATCAACTCTTCACCTGGTGCT 13311411
>seq10
Length=17599535
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||||||||| ||||| ||||| || |||| |||||| | |
Sbjct 17167909 ATGCAAATTTTCGTGAAAACGCTCACCGGCAAGACCATTACTCTCGAGGTCGAGAGCTCT 17167968
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || ||||| | |||||
Sbjct 17167969 GACACCATCGATAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCA 17168027
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||| || || ||||| || || | ||||| ||| || |||||
Sbjct 17168028 GCAGAGGCTTATCTTCGCCGGTAAGCAGCTAGAGGATGGACGCACACTCGCTGATTACAA 17168087
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| ||||| | || || || | || ||||||
Sbjct 17168088 TATCCAGAAGGAGTCTACTCTCCACCTTGTTCTGCGT 17168124
>seq5
Length=23960834
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | || || || |||||||| | || |||||| | |
Sbjct 16975304 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACCATCACACTGGAGGTCGAGAGCTCG 16975363
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | || | || |||| ||||| || || || || | |||||
Sbjct 16975364 GACACGATTGATAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 16975422
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | |||||||| |||||||||
Sbjct 16975423 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTAGCCGACTACAA 16975482
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || |||||| |||||
Sbjct 16975483 CATCCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGT 16975519
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | ||||| || || ||||| |||| || ||| | ||
Sbjct 16975076 ATGCAGATCTTTGTCAAGACCTTAACGGGAAAGACGATCACACTCGAGGTGGAGAGCTCC 16975135
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || || | ||||| |||||||| || |||||||
Sbjct 16975136 GACACCATCGATAACG-TCAAGGCTAAGATACAGGACAAGGAGGGAATCCCGCCCGACCA 16975194
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | || ||||| ||| |||| || | || || | |||||||||
Sbjct 16975195 GCAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACATTGGCCGACTACAA 16975254
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||| || ||||| |||| || ||| | ||| | ||| || | || |||
Sbjct 16975255 CATTCAGAAGGAGTCGACTCTTCATCTCGTGTTACGTCTGCGTGGAGGC 16975303
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || | || || | ||||| || || |||||| | || || || | |
Sbjct 16974848 ATGCATATCTTTTTCAAGACCTTAACGGGAAAGACGATCACCCTTGAGGTGGAAAGCTCT 16974907
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | |||||| || || | ||||| ||||| ||||| | || ||
Sbjct 16974908 GACACCATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGATCAG 16974967
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| ||||||| | ||| || || ||||| || |||| | | ||||| ||| ||||||
Sbjct 16974968 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGGAGAACCCTAGCCGATTACAAC 16975027
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
||||| ||||| |||| || ||| | || ||
Sbjct 16975028 ATCCAGAAGGAGTCGACTCTACATCTCGTCCT 16975059
>seq8
Length=21613650
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || || |||||| |||| || || | ||
Sbjct 12584792 ATGCAGATCTTCGTTAAGACTCTCACCGGGAAGACGATCACCCTCGAGGTGGAAAGCTCC 12584851
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| || || || || |||||| | || ||
Sbjct 12584852 GACACCATCGACAACG-TCAAAGCCAAGATCCAGGATAAGGAAGGCATTCCCCCGGATCA 12584910
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || || ||||| || |||| | || ||| ||||||||
Sbjct 12584911 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTAGAACTCTCGCTGACTACAA 12584970
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | | || || |||||| |||||
Sbjct 12584971 CATCCAGAAGGAGACTAATCTCCACTTGGTGTTGCGT 12585007
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || | | || || || |||||||| | || || ||| | |
Sbjct 12585248 ATGCAGATCTTTGTCAAGAACTTAACCGGAAAGACCATCACACTGGAGGTGGAGAGCTCG 12585307
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || | || || | |||||
Sbjct 12585308 GACACCATTGATAACG-TCAAGGCCAAGATCCAAGACAAGGAAGACATCCCTCCAGACCA 12585366
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | |||||||| |||||||||
Sbjct 12585367 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAA 12585426
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| |||||||| |||| || || |||||| |||||
Sbjct 12585427 CATTCAAAAGGAGTCGACCCTTCACTTGGTGTTGCGT 12585463
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || || |||||| | || |||||| ||
Sbjct 12585020 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACGATCACCCTTGAGGTCGAGAGTTCC 12585079
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | |||| || |||| ||||| || || || || | |||||
Sbjct 12585080 GACACAATCGACAACG-TGAAAGCCAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCA 12585138
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| ||||| ||||| || |||| | || || ||||||||
Sbjct 12585139 GCAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGTAGAACTCTGGCTGACTACAA 12585198
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || |||||| ||||| || | || ||
Sbjct 12585199 CATCCAGAAGGAGTCTACTCTCCACTTGGTGTTGCGTCTGCGTGGAGG 12585246
>seq1
Length=28635137
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || | ||||| || || ||||| | || || || | ||
Sbjct 22221874 ATGCAAATCTTCGTTAAGACTTTGACGGGAAAGACTATCACTTTGGAGGTTGAAAGCTCC 22221815
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | |||| || |||| ||||||||||| || || | |||||
Sbjct 22221814 GACACTATTGACAACG-TCAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 22221756
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || || |||||||| || | |||||| | || |||||
Sbjct 22221755 GCAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGTCGCACCTTGGCAGATTACAA 22221696
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | ||||| || ||||| |||||
Sbjct 22221695 CATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGT 22221659
Score = 93.3 bits (102), Expect = 4e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| ||||| |||||||| | || || ||| | |||||| | | | |||| | || |
Sbjct 22221345 ACCGGCAAGACCATCACACTGGAGGTGGAGAGCTCCGACACCATTGACAACG-TCAAGGC 22221287
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| || || || || | ||||| ||||| ||||| | ||| || ||
Sbjct 22221286 CAAGATCCAAGACAAGGAAGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAAA 22221227
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
||||| || || | |||||| | |||||||||||||| ||||| |||| || ||
Sbjct 22221226 GCAGCTCGAGGATGGTCGCACCTTAGCAGACTACAACATCCAGAAGGAGTCGACACTTCA 22221167
Query 38447 TTTGGTGCTGCGT 38459
||||| || |||
Sbjct 22221166 CTTGGTCCTCCGT 22221154
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| || || || || || ||||| | || || || | ||
Sbjct 22222102 ATGCAGATCTTTGTTAAAACTCTGACCGGAAAGACGATCACTTTGGAGGTTGAAAGCTCC 22222043
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| |||| | || |||| || || |||||||| || | |||||
Sbjct 22222042 GATACCATCGACAACG-TTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCA 22221984
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| ||||||| | || ||||| ||| |||| || | | || || |||||||||
Sbjct 22221983 GCAGAGGCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTTGCCGACTACAA 22221924
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| |||| || ||| | || ||
Sbjct 22221923 CATCCAGAAGGAGTCGACTCTTCATCTCGTCCT 22221891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499921156812160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |