Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq24705 610 7e-170 seq40249 601 4e-167 seq27683 205 1e-47 seq13684 194 2e-44 seq3029 143 3e-29 seq10 127 2e-24 seq34187 87.8 2e-12 >seq24705 Length=1162 Score = 610 bits (676), Expect = 7e-170 Identities = 717/975 (74%), Gaps = 3/975 (0%) Strand=Plus/Plus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| ||| | ||| | || |||||| | || ||||| || |||| |||||||| ||| | Sbjct 190 CTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTT 249 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||||||||| || | | ||||| ||||| || || ||||||||| ||| ||| | Sbjct 250 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 308 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| || || || |||||||| || || || ||| ||||||| | | ||||| |||| Sbjct 309 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 368 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | || ||||||||||| || | ||| ||||| || || || | ||||| || || | Sbjct 369 ATATTATCTCTGGTGCTATTATCCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 428 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 | |||||||| ||| | | || |||||||| |||||||||||||||| | || | | Sbjct 429 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTG 488 Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445 || | |||| | | |||| | | ||||||||||||||||||||||| || || Sbjct 489 TTCTACACTCCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 548 Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505 |||| ||||||||||| ||||| ||||||||| || ||||| || || || || ||| Sbjct 549 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 608 Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565 |||| ||| | | || ||| | |||||||| || ||||| | |||||| | || | Sbjct 609 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 668 Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625 |||||||||| ||||||| ||| |||| ||||| || ||||||||||| || ||||||| Sbjct 669 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 728 Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685 | || || ||| | || || ||||| ||||||||||| || || || ||||| ||||| | Sbjct 729 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 788 Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745 ||||| |||| || || | | | || | ||||| || |||| ||| || || | | Sbjct 789 GTTCTTTGGTAACTTC-TAGTTTGTCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 847 Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805 ||||||| || ||||| || ||||| || ||||| || || |||||||||||||| || | Sbjct 848 GTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTG 907 Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865 | || | ||||||||||| || ||||||||||| || || | ||||||||||||| Sbjct 908 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 967 Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925 | || |||||||| || || ||||||| |||| Sbjct 968 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 1027 Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985 |||| || |||||||| |||||||| ||| | |||||||| ||| ||| | || Sbjct 1028 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 1087 Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045 ||||||| || | ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct 1088 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATG 1147 Query 168046 CTCACAACTTCCCTC 168060 ||||||||||||||| Sbjct 1148 CTCACAACTTCCCTC 1162 >seq40249 Length=153482 Score = 601 bits (666), Expect = 4e-167 Identities = 718/984 (73%), Gaps = 0/984 (0%) Strand=Plus/Minus Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156 ||| | || || ||| | |||||||| || | || ||||| || ||| ||||||||||| Sbjct 1333 TGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1274 Query 167157 ACGTTGCTTGCAGCAACCATCTGTTTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGAC 167216 || || | | ||||| | ||| || ||||| ||| | | ||||||||| || || Sbjct 1273 ACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGAT 1214 Query 167217 ATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 167276 || |||||||| || ||||| ||| |||| || || | || || ||||| || || || Sbjct 1213 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCA 1154 Query 167277 GGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGCA 167336 ||||| || ||||| ||||| ||||||||| | || || || || ||||||||||| Sbjct 1153 GGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCT 1094 Query 167337 GCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTC 167396 ||| || | || || ||| | ||||| |||||||||| |||| | ||| | ||||| Sbjct 1093 GCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTT 1034 Query 167397 CTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATG 167456 | |||| | | ||||||||||||||||||||||| || |||||| |||||| Sbjct 1033 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 974 Query 167457 CGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTC 167516 ||||| ||||| ||||||||| || ||||| || || || || ||||||| ||| | Sbjct 973 CGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 914 Query 167517 GTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACA 167576 |||| || | |||||||| ||| ||||| | |||||||| || ||||||||||| Sbjct 913 ATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACT 854 Query 167577 TTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATG 167636 ||||||| ||| |||| ||||| || ||||||||||| || |||||||| || || ||| Sbjct 853 TTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATG 794 Query 167637 CTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTT 167696 | || || ||||| ||||||||||| || || || ||||| ||||| |||||| |||| Sbjct 793 TTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTA 734 Query 167697 ACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTC 167756 || ||| || | | |||||||| |||| ||| || || | ||||||| ||| Sbjct 733 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 674 Query 167757 GGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATC 167816 ||||| |||||||| || || ||||| || |||||||| ||||| || || || ||||| Sbjct 673 GGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATC 614 Query 167817 TTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCT 167876 |||||||| || |||||||| || || || | || |||||||| || || ||||| Sbjct 613 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCG 554 Query 167877 GTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGT 167936 || || ||||| |||| |||||||| || ||| Sbjct 553 GTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGT 494 Query 167937 TTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGAC 167996 ||||| |||||||| || | |||||||| || ||| | ||||||||| || Sbjct 493 TTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGAT 434 Query 167997 GTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 168056 | | ||||||||| || ||||||||||||||||| || |||||||||||||||||| Sbjct 433 ATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTC 374 Query 168057 CCTCTCGACCTTGCTGCTGCTGAG 168080 ||||| ||||| ||||||| |||| Sbjct 373 CCTCTAGACCTAGCTGCTGTTGAG 350 Score = 601 bits (666), Expect = 4e-167 Identities = 736/1002 (73%), Gaps = 2/1002 (0%) Strand=Plus/Plus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| || ||||||||||| ||||||||||| || | || ||| Sbjct 31947 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 32006 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||| ||| | ||| | || |||||| | || || || | || || || ||| Sbjct 32007 CCTTGTGCCTATTTCGCTTTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 32066 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674 |||||||| || ||||| ||||||||| | || || || ||| | || || |||||| Sbjct 32067 TATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 32126 Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734 |||||| || || | | | |||||| | || | || ||||||||||| |||||| Sbjct 32127 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 32186 Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794 || ||||| | ||||||||| | || || || ||||||||||| || |||||||| Sbjct 32187 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTGTTGCTCTCCACGGT 32246 Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853 |||||||| |||| ||||| ||| | ||||| |||||||| || || ||| || | | Sbjct 32247 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 32305 Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913 || || || ||||| || || ||||||||||| || |||||||||||| |||||||| Sbjct 32306 GCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTTCT 32365 Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973 || || || || |||||||| ||||||| || || || ||| || || | || || Sbjct 32366 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 32425 Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033 || |||||| | ||||| | ||||| || ||||| |||||| |||| ||||||||||| Sbjct 32426 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 32485 Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093 |||||| || || ||| | |||| | || || | | || |||||||||| ||| || Sbjct 32486 GATGGGAGTCGCTGGTGTACTGGGCGCGGCTCTGTTATGCGCTATTCATGGTGCTACTGT 32545 Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153 ||| |||||| | | | |||||||||| |||||||| ||| || ||| || || Sbjct 32546 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 32605 Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213 ||| | || || || ||||||||||| || || ||||| || ||||| || |||||||| Sbjct 32606 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 32665 Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273 |||| || ||||| | ||||| |||||||||||| | ||||| || || | || Sbjct 32666 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGG 32725 Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333 | | |||| ||| | | || | | ||||| ||| | ||||| ||||| |||||||| Sbjct 32726 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 32785 Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393 |||||||| || ||| | ||||| |||||||| || |||||||| ||||| || || || Sbjct 32786 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAAAA 32845 Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453 || || || ||||||||| |||| || ||| | || || ||||| |||||||| || Sbjct 32846 TATTCTTTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 32905 Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 | || | ||||||||||| || || || || || || || || Sbjct 32906 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 32947 >seq27683 Length=354 Score = 205 bits (226), Expect = 1e-47 Identities = 251/343 (73%), Gaps = 0/343 (0%) Strand=Plus/Minus Query 168880 CTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTT 168939 ||||||| || |||||||||||| || || || || || || ||||| ||||| ||| Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 168940 GGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAG 168999 |||| || || || ||| || || |||| || || |||||| | || ||| | |||| Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAG 235 Query 169000 GATTCCATAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAG 169059 |||| ||||| ||||| |||| ||||||||||||||||| || || || | || || | Sbjct 234 GATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGTG 175 Query 169060 GAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTG 169119 || |||| | || |||||||| | || ||||| || ||||| | | | || |||| Sbjct 174 CGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGTG 115 Query 169120 AACAAGCAAATACTTTCAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGG 169179 | |||||||| ||| || ||| || ||||| | || || || ||||| |||| Sbjct 114 ATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGG 55 Query 169180 TTACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTT 169222 | ||||| ||||| || ||||| || ||||||||| |||| || Sbjct 54 TCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTT 12 >seq13684 Length=3594 Score = 194 bits (214), Expect = 2e-44 Identities = 199/260 (77%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 169236 TGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGT 169295 ||||| |||||||||||||| ||||| || || | ||| | |||| ||| | || || Sbjct 3 TGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGC 62 Query 169296 ATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCA 169355 | |||| | ||||| ||| | ||||| ||||||||||||||||| || ||| | ||| Sbjct 63 GTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 122 Query 169356 GCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTT 169415 || |||||||| || |||||||| ||||||||||| || || || || ||||| ||| || Sbjct 123 GCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATT 182 Query 169416 CGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTA 169475 ||||| ||| | ||| || ||||| |||||||| || || | ||||||||||| || Sbjct 183 CGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTT 242 Query 169476 CTTCCCCGAGGTAATGCCCT 169495 || || || || || || || Sbjct 243 CTACCACGTGGAAACGCTCT 262 >seq3029 Length=7874 Score = 143 bits (158), Expect = 3e-29 Identities = 182/248 (73%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | | |||| |||||||||||||| || |||||||| || | || ||| Sbjct 247 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 188 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||||||| | ||| | || |||||| |||| ||||| |||| || || |||| Sbjct 187 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 128 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTT-ACTGCGGCAGT 168673 ||||| || || ||||| ||||||||| |||| || || |||||| || || ||||| Sbjct 127 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 69 Query 168674 TAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACA 168733 | ||| || || || | | | || ||| | |||| || ||||| || || ||||| Sbjct 68 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCCGAAGCACA 9 Query 168734 AGGGGATT 168741 ||| |||| Sbjct 8 AGGAGATT 1 >seq10 Length=17599535 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 167565 ATCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCAC 167624 ||||||||||| ||||||| ||| |||| |||| || ||||||||||| || |||||| Sbjct 16803128 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCAC 16803187 Query 167625 CCCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCAC 167684 || || || || | || || | ||| |||||| | ||||| | || |||| ||| | Sbjct 16803188 CCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTAT 16803247 Query 167685 GGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTAT 167744 |||| | |||| || ||| | || | ||||||| ||| ||| || ||| | Sbjct 16803248 GGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACGAA 16803307 Query 167745 GGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCA 167794 |||| | |||||||| |||||||| || || ||||| || ||||||| Sbjct 16803308 AGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCA 16803357 >seq34187 Length=13517 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 168774 GCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAA 168833 |||||||| || |||||||| |||||||| |||| ||||| ||| | ||||| |||||| Sbjct 532 GCTTTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAA 473 Query 168834 CTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGC 168892 || || || ||| || | | || || || ||||| || || ||||||||||| || || Sbjct 472 CTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGC 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560325951107600