Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq24705 636 2e-177 seq40249 627 1e-174 seq27683 239 6e-58 seq13684 168 8e-37 seq10 136 5e-27 seq3029 116 5e-21 seq38010 100 3e-16 seq34187 86.0 8e-12 >seq24705 Length=1162 Score = 636 bits (704), Expect = 2e-177 Identities = 714/948 (75%), Gaps = 9/948 (1%) Strand=Plus/Plus Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880 |||||||| || |||| ||||| ||||| |||||||||| || | ||| | ||||| Sbjct 218 AATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 277 Query 181881 ATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGA 181939 ||||| || || | || ||| | || || ||||| || ||||| || ||||| || || Sbjct 278 -TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 336 Query 181940 ACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATC 181999 || || ||||||| | | ||||| ||||| || |||||||||||| || |||| | Sbjct 337 GCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATCCCTAC 396 Query 182000 CTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTG 182059 || || || || | ||||| |||||||| ||||||||||| || |||||||||| Sbjct 397 TTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTG 456 Query 182060 GCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC 182119 | | || || |||||||||| | || ||||| | |||| | | | || | || || Sbjct 457 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTCCTTACTTGG--TGTA-GC 513 Query 182120 CT---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTG 182176 | | ||||| ||||||||||||||| || ||| | ||||||||||| ||||| Sbjct 514 TTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGC 573 Query 182177 TGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGG 182236 ||| ||||| || ||||| || || || || ||||||| ||||| | || ||| | || Sbjct 574 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 633 Query 182237 TCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTT 182296 |||||| || || |||| ||||| | |||||||| || || ||||||| |||| | Sbjct 634 TCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGAT 693 Query 182297 GGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGG 182356 || ||||| ||||||||||||||||||||||| || || |||||||| |||||||| || Sbjct 694 TGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 753 Query 182357 TGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGT 182416 ||||||||| || || || |||||||| ||||| ||||||||||| || ||| | || Sbjct 754 TGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTT-GT 812 Query 182417 CCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGA 182476 | | || || ||||| | || || || | |||||||| || |||||||| ||||| Sbjct 813 CAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGA 872 Query 182477 GACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATC 182536 || ||||| || || || || ||||| || || || || || ||||||||||| || Sbjct 873 AACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 932 Query 182537 ATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTG 182596 ||||||||||| ||||| || ||||||||| | ||||| |||||||| || |||||||| Sbjct 933 TTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTG 992 Query 182597 GTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCA 182656 |||||| || | ||| | || ||||| |||||||| || |||||||| |||||||| Sbjct 993 GTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCA 1052 Query 182657 GTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGC 182716 || | ||||| |||| ||||| || |||| |||||||| ||| | | |||||||| Sbjct 1053 ATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGC 1112 Query 182717 TGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCC 182764 | |||||||||||||| ||||| || ||||| || ||||||||||| Sbjct 1113 TAACCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCC 1160 >seq40249 Length=153482 Score = 627 bits (694), Expect = 1e-174 Identities = 722/969 (75%), Gaps = 6/969 (1%) Strand=Plus/Minus Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880 || ||||| || | || ||||||||||| |||||||||| || | ||| | ||||| Sbjct 1315 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1256 Query 181881 ATCTGTTTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGAA 181940 | ||| || | || ||| | || || ||||| || ||||| || ||||| || ||| Sbjct 1255 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1196 Query 181941 CCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCC 182000 || || |||| || || | || || ||||| || || || ||||| || | || | Sbjct 1195 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACT 1136 Query 182001 TCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGG 182060 || || |||||| | || || ||||| |||||||||||||| || ||||||| ||| Sbjct 1135 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1076 Query 182061 CTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCC 182120 || || ||||||||||||| |||| ||||| | ||||| | | || | || || Sbjct 1075 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGG--TGTA-GCT 1019 Query 182121 T---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGT 182177 | | ||||| ||||||||||||||| || ||| | ||||||||||| ||||| | Sbjct 1018 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCT 959 Query 182178 GTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGT 182237 || ||||| || ||||| || || || || ||||||| ||||| |||| || | ||| Sbjct 958 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGT 899 Query 182238 CAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTG 182297 ||||| || || |||| ||||| || |||||||| || || ||||||| |||| | Sbjct 898 CAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATT 839 Query 182298 GTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGT 182357 || ||||| ||||||||||||||||||||||| || || |||||||| |||||||| ||| Sbjct 838 GTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGT 779 Query 182358 GTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTC 182417 |||||||| || || || |||||||| ||||| ||||||||||| || ||| | || Sbjct 778 GTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTGATC 719 Query 182418 CGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAG 182477 | || || || || | || || || | ||||||| ||||||||||||||||| Sbjct 718 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAA 659 Query 182478 ACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCA 182537 || || ||||| || || || || || || || || || |||||||||||||| || Sbjct 658 ACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 599 Query 182538 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGG 182597 |||||||| || ||||| || || |||||| | || || ||||| || || || || ||| Sbjct 598 TTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGG 539 Query 182598 TTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 182657 || || || | ||| | || ||||| |||||||| || |||||||| |||||||| Sbjct 538 TTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAA 479 Query 182658 TCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCT 182717 || | ||||| |||| || ||||| |||| |||||||| ||| | | ||||||||| Sbjct 478 TCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCT 419 Query 182718 GGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCT 182777 ||||||||||||||||||||||| ||||| || ||||||||||| ||||| || ||| Sbjct 418 AACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 359 Query 182778 GCTGCTGAG 182786 |||| |||| Sbjct 358 GCTGTTGAG 350 Score = 574 bits (636), Expect = 6e-159 Identities = 735/1010 (73%), Gaps = 6/1010 (1%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || ||||| || ||||| || |||||||| || | || || Sbjct 31947 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 32006 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 32007 CCTTGTGCCTATTTCGCTTTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 32066 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372 ||||| |||||| | ||| ||||||| | |||||| || ||| | || || || || Sbjct 32067 TATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 32126 Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432 || || |||||| | | | | |||||| | ||||||| ||||||||||| | ||| Sbjct 32127 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 32186 Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492 || || ||| || ||||| ||| | || || || ||| |||||| || ||||||||| Sbjct 32187 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTGTTGCTCTCCACGGT 32246 Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552 || || || | || ||||| ||| | || || |||||||||||||| | || | Sbjct 32247 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTG 32306 Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612 || ||||| ||||| || || ||||||||||| |||||||||||||| ||| || || Sbjct 32307 CGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTTCTA 32366 Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 183672 || |||||||| ||||| ||| ||||||||||| |||||||| || ||||| || || Sbjct 32367 ATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATA 32426 Query 183673 TTTAGAT---TCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729 ||| ||| |||| || |||| ||||||| || || ||||| || ||||| || ||| Sbjct 32427 TTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTTCAT 32483 Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789 ||||||||||| |||||| |||| || | || || | | ||||| ||||||| || Sbjct 32484 ATGATGGGAGTCGCTGGTGTACTGGGCGCGGCTCTGTTATGCGCTATTCATGGTGCTACT 32543 Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849 ||||| ||||| || | ||||||||| || ||||| |||||| || ||| | | Sbjct 32544 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 32603 Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909 ||||||| ||||| || ||||| ||||| || || || || || |||||||||||||| Sbjct 32604 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 32663 Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969 |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | Sbjct 32664 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACT 32723 Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029 ||| | ||| | | || |||| | | || || ||| | || || ||||| ||||| Sbjct 32724 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 32783 Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089 || || || || ||| | ||||| |||||||| ||||||||||| ||||| || || Sbjct 32784 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAA 32843 Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149 || || ||| | || ||||| | || || ||| | || || ||||| || ||||| Sbjct 32844 AATATTCTTTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 32903 Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 || ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 32904 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 32953 >seq27683 Length=354 Score = 239 bits (264), Expect = 6e-58 Identities = 264/352 (75%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 183578 CTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCAT 183637 ||||||| |||||||||||||| |||||||||||| ||||||||||| || ||| | Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 183638 GGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGG 183697 |||||||||| || ||||| || |||||||| || ||| ||||| | | ||| | || | Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAG 235 Query 183698 GTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAG 183757 | || || || |||||||| ||||| || ||||||||||||||||| || || |||| | Sbjct 234 GATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGTG 175 Query 183758 GAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAG 183817 || || || | ||||| ||||| | || ||||| || || | | ||| || || | Sbjct 174 CGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGTG 115 Query 183818 AACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGG 183877 | ||||| || ||| || ||| | | ||||||| ||||| || ||||| |||| Sbjct 114 ATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGG 55 Query 183878 TTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAA 183929 | || || || || || ||||| |||||||| || ||||| ||| |||||| Sbjct 54 TCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAA 3 >seq13684 Length=3594 Score = 168 bits (186), Expect = 8e-37 Identities = 198/268 (74%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 183932 GTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTG 183991 ||||||| || ||||||||| | ||||| || |||| ||| | ||| | | |||||| Sbjct 1 GTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTG 60 Query 183992 GCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAG 184051 || | |||| | ||||| || | ||||| ||||| ||||| || || ||| | | Sbjct 61 GCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTG 120 Query 184052 CAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGAC 184111 |||| |||||||| ||||||||||| |||||||| || || || ||| | || || || Sbjct 121 CAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTA 180 Query 184112 TACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGG 184171 | ||||| ||| | ||| || ||||| || ||||| ||| ||||||| || ||||||| Sbjct 181 TTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGG 240 Query 184172 TATTACCTAGAGGCAATGCTCTTTGATG 184199 | |||| | || || ||||||| ||| Sbjct 241 TTCTACCACGTGGAAACGCTCTTTAATG 268 >seq10 Length=17599535 Score = 136 bits (150), Expect = 5e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 182269 GAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGC 182328 ||||||| || || ||||||| |||| | || |||| |||||||||||||||||||||| Sbjct 16803126 GAATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGC 16803185 Query 182329 ATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGC 182388 | || || ||||| || ||||||| ||||||||| ||||||| | ||||||| ||| Sbjct 16803186 ACCCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGT 16803245 Query 182389 ACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACT 182448 | |||| |||||| || ||| | | | | || || | | || || ||| Sbjct 16803246 ATGGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACG 16803305 Query 182449 ATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGT 182491 | |||| | ||||||||||||||||| || || ||||| || Sbjct 16803306 AAAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGT 16803348 >seq3029 Length=7874 Score = 116 bits (128), Expect = 5e-21 Identities = 175/246 (71%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | | || || || || ||||| || |||||||| || | || || Sbjct 247 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 188 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||||||| | || | || |||||| |||| || ||| ||||||| || |||| Sbjct 187 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 128 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTT-ACGGCAGCTGT 183371 |||||||||||| | ||| ||||||| | |||||| ||| |||||| || ||||| || Sbjct 127 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 69 Query 183372 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCA 183431 || || ||||| | | | | || ||| | || |||| ||||| || || | || Sbjct 68 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCCGAAGCACA 9 Query 183432 AGGGGA 183437 ||| || Sbjct 8 AGGAGA 3 >seq38010 Length=70015 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 182631 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAAC 182690 ||||| || |||||||| |||||||| || | ||||| |||| || ||||| |||| Sbjct 45327 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 45386 Query 182691 ACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGA 182743 |||||||| ||| | | ||||||||| |||||||||||||||||| |||| Sbjct 45387 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGTATGA 45439 >seq34187 Length=13517 Score = 86.0 bits (94), Expect = 8e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 183474 TTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACT 183533 |||||| || ||||||||||| || || | || ||||| ||| | || || |||||||| Sbjct 530 TTTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACT 471 Query 183534 TGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGC 183590 |||||| | || | || ||||| ||||| || || ||||||||||| ||||| Sbjct 470 TGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGC 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611388248096200