Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq24705 670 0.0 seq40249 666 0.0 seq27683 224 1e-53 seq13684 201 1e-46 seq3029 116 4e-21 seq34187 93.3 5e-14 seq2 93.3 5e-14 seq10 89.7 6e-13 >seq24705 Length=1162 Score = 670 bits (742), Expect = 0.0 Identities = 734/972 (76%), Gaps = 3/972 (0%) Strand=Plus/Plus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||| | ||| | ||| ||| | || |||||||| |||| |||||||||||| | Sbjct 191 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 250 Query 164824 ATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCC 164882 |||||||| || | |||| || | ||| ||||||| || ||||||||||| || Sbjct 251 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 309 Query 164883 CCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAA 164942 || || || ||||||||||||||||| ||||| | |||||| || | || || ||||| Sbjct 310 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 369 Query 164943 CATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTAT 165002 || |||||||||||| | | || ||||| || |||||| | ||||| || || || Sbjct 370 TATTATCTCTGGTGCTATTATCCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 429 Query 165003 TTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGT 165062 ||||||||||||| | | ||||| ||||| ||||| ||||||||||| || | |||| Sbjct 430 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 489 Query 165063 CTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 165122 | |||| | | | ||||||||||| || |||||||||||||||||||| || ||| Sbjct 490 TCTACACTCCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 549 Query 165123 CCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGC 165182 || |||||||||||||||||| || |||||| || ||||| || |||||| | || Sbjct 550 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 609 Query 165183 AGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTAT 165242 |||||| || | || ||| | |||||||| || || ||||||||||||||| | || || Sbjct 610 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAAT 669 Query 165243 CTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCC 165302 |||||||||||| |||| |||| | || ||||| || || || |||||||||||||| || Sbjct 670 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 729 Query 165303 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 165362 || |||||| | || || ||||| |||||||| || || || || |||||||||||| Sbjct 730 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 789 Query 165363 AAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGG 165422 | | || |||| || | ||| | || || ||||||| || | || | || Sbjct 790 TTCTTTGGTAACTT-CTAGTTTGTCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGG 848 Query 165423 TTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGG 165482 ||| || ||||| ||||| ||||| || ||||| || || ||||| || || || || || Sbjct 849 TTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGG 908 Query 165483 TCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGC 165542 || | || |||||||| || |||||||| || ||||| | ||||||||| | || Sbjct 909 CCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 968 Query 165543 AGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAA 165602 || ||||||||||| || ||||||||||||||| | ||| |||| || ||||| ||||| Sbjct 969 TGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 1028 Query 165603 CCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTAC 165662 ||| || |||||||| |||||||| ||| | ||||||||||| | || ||| Sbjct 1029 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 1088 Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722 ||||||||| | | ||||||||| || ||||||||||| ||||| || ||||| || Sbjct 1089 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 1148 Query 165723 TCACAACTTCCC 165734 |||||||||||| Sbjct 1149 TCACAACTTCCC 1160 >seq40249 Length=153482 Score = 666 bits (738), Expect = 0.0 Identities = 729/965 (76%), Gaps = 8/965 (1%) Strand=Plus/Minus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCC---CTGTTTGCTCGCCGCT 164847 ||||||||||| | || ||||| |||||| | |||||||| || ||| ||| || Sbjct 1315 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1256 Query 164848 ACAATTTGTTTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGT 164907 | ||| |||||| |||||||| |||||||| || || || ||||||||||||||| Sbjct 1255 TCCGTTT---TTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGT 1199 Query 164908 GAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCG 164967 |||||||| | || ||||| | ||||| ||||| || || || ||||| | |||| Sbjct 1198 GAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCT 1139 Query 164968 TCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAA 165027 ||||| || || || | || || || || || |||||||||||| || | |||||| Sbjct 1138 ACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAA 1079 Query 165028 TGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCT 165087 ||| | ||||||||||||||||| | | |||| | ||||| | | ||||||||| Sbjct 1078 TGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCT 1019 Query 165088 TGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGC 165147 || || |||||||||||||||||||| || ||| || |||||||||||||||||| Sbjct 1018 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCT 959 Query 165148 GTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGT 165207 || |||||| || ||||| || |||||| | || |||||| || |||| || | ||| Sbjct 958 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGT 899 Query 165208 CAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTC 165267 ||||| ||||| ||||||||||||||||| || |||||||||||||| |||| |||| | Sbjct 898 CAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATT 839 Query 165268 GTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGG 165327 || ||||| || || || |||||||||||||| || || |||||| | || || ||||| Sbjct 838 GTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGT 779 Query 165328 GTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTC 165387 |||||||| || || || || |||||||||||| | | || ||||| | || Sbjct 778 GTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACTTCTAGTTTGATC 719 Query 165388 CGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAG 165447 | || || || |||| || | || | ||||| | || || ||||||||||| Sbjct 718 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAA 659 Query 165448 ACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCC 165507 || || ||||| || ||||| ||||| || || || || | || |||||||| || Sbjct 658 ACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 599 Query 165508 TTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGG 165567 ||||||||||| ||||| | || |||||| | || || ||||| ||||| ||||| ||| Sbjct 598 TTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGG 539 Query 165568 TTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 165627 || |||||| | ||| |||| || ||||| |||||||| || |||||||| |||||||| Sbjct 538 TTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAA 479 Query 165628 TCTATTGTTGATAGTC-AGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGTGC 165686 || | |||||||||| || || | || |||||||||||| || | |||||||| Sbjct 478 TCAGTAGTTGATAGTCAAGGAC-GTGTTATTAATACTTGGGCTGATATTATTAACCGTGC 420 Query 165687 TGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACCTCGC 165746 | || |||||||||||||||||||| ||||| |||||||||||||| || ||||| || Sbjct 419 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 360 Query 165747 TGCTG 165751 ||||| Sbjct 359 TGCTG 355 Score = 589 bits (652), Expect = 2e-163 Identities = 725/988 (73%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 31965 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 32024 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || ||||||||||||||| | || Sbjct 32025 TTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCT 32084 Query 166311 AGCAGTTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCT 166370 || ||| | || ||| || ||| | || || |||||||||||||| || || | Sbjct 32085 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 32144 Query 166371 ATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 166430 | | |||||| | | | || ||||||||||| || ||||| ||||| | ||| Sbjct 32145 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 32204 Query 166431 TGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGT 166490 || ||| | || || || ||||| ||||||||||||||||||||||| || |||| ||| Sbjct 32205 TGTCAATTAGGCGGTCTGTGGGCTTTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGT 32264 Query 166491 TTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAAT 166549 || ||| | || || |||||| | ||||| ||| | | | || || || |||||||| Sbjct 32265 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAAT 32323 Query 166550 CGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCA 166609 ||| || |||||||| |||||||| || ||| ||||||||| || || || || ||||| Sbjct 32324 CGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTTCTAATTTATCCACTAGGTCA 32383 Query 166610 ATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTT 166669 ||| ||||||| || || || ||| || || | || || || |||||| |||| || Sbjct 32384 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTT 32443 Query 166670 CCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTAT 166729 | ||||| || || || |||||| |||||||||||||||||||||| || || ||| | Sbjct 32444 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCTGGTGT 32503 Query 166730 TCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCA 166789 || || | || || | | || || ||||||| ||| ||||| || ||| | | | | Sbjct 32504 ACTGGGCGCGGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGA 32563 Query 166790 AGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTA 166849 ||||||||| |||||||| ||| || || || | ||||||| |||||||| || Sbjct 32564 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 32623 Query 166850 TTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAA 166909 ||||||||| || || ||||||| |||||| || ||||| || |||| ||| ||||| Sbjct 32624 TTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 32683 Query 166910 GAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCAT 166969 | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | | Sbjct 32684 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCT 32743 Query 166970 CGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAG 167029 || | | ||||| ||| | ||||| ||||| |||||||| |||||||| ||| | | Sbjct 32744 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCG 32803 Query 167030 GGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGG 167089 ||||| || ||||| || ||||| || |||||||| || || ||||| || || || || Sbjct 32804 TGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 32863 Query 167090 TATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGA 167149 ||| || |||||||||| || ||||| |||||||| | | |||||||||| || Sbjct 32864 TATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 32923 Query 167150 GGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||||| || | || |||||||| ||| Sbjct 32924 GGTTCTACCACGTGGAAACGCTCTTTAA 32951 >seq27683 Length=354 Score = 224 bits (248), Expect = 1e-53 Identities = 261/352 (74%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 166558 CTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTT 166617 ||||||| |||||||| || ||| ||| || || || || || ||||| ||||| ||| Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 166618 GGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAG 166677 |||| || || || ||| || || |||| || || |||||| |||||||| | |||| Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAG 235 Query 166678 GATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTG 166737 |||| || || ||||| |||||||||||||||||||||| || || || | | |||| Sbjct 234 GATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGTG 175 Query 166738 GTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTG 166797 || |||| | || || ||||| | || ||||| |||||||| | | | || |||| Sbjct 174 CGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGTG 115 Query 166798 AACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGG 166857 | |||||||| ||| || || || | ||||||| |||||||| ||||| |||| Sbjct 114 ATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGG 55 Query 166858 TTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAA 166909 | || || ||||||| |||||| || ||||| ||| |||| ||| ||||| Sbjct 54 TCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAA 3 >seq13684 Length=3594 Score = 201 bits (222), Expect = 1e-46 Identities = 203/264 (77%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 166914 TGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGT 166973 ||||| |||||||||||||| ||||| || || | ||| | |||| ||| | || || Sbjct 3 TGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGC 62 Query 166974 ATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCA 167033 | |||| | ||||| ||| | ||||| ||||||||||||||||| ||| | | ||| Sbjct 63 GTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 122 Query 167034 GCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATG 167093 || || |||||||| ||||| || ||||| ||||| || ||||| || || |||||||| Sbjct 123 GCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATT 182 Query 167094 CGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTT 167153 ||| | ||||||||| || ||||| |||||||| | | | |||||||||| |||||| Sbjct 183 CGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTT 242 Query 167154 CTTCCTAGAGGTAACGCTCTCTAA 167177 || || | || |||||||| ||| Sbjct 243 CTACCACGTGGAAACGCTCTTTAA 266 >seq3029 Length=7874 Score = 116 bits (128), Expect = 4e-21 Identities = 176/248 (71%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 166173 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTT 166232 || |||||| | | | || |||||||||||||| || |||||||| || | || || Sbjct 247 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 188 Query 166233 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGG 166292 || ||||||| | ||| | || |||||| | || ||||| ||||| || || |||| Sbjct 187 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 128 Query 166293 TATACTCATGGACTCGCAAGCAGTTATCTGGAGGGTGCAAACTTTCTTA-CTGCGGCAGT 166351 ||||| |||||| | || || ||| |||| ||| || ||||||| | || ||||| Sbjct 127 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 69 Query 166352 TTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCA 166411 |||||| || || || | | | || ||| | | || || ||||| || || || || Sbjct 68 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCCGAAGCACA 9 Query 166412 AGGGGATT 166419 ||| |||| Sbjct 8 AGGAGATT 1 >seq34187 Length=13517 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/125 (78%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 166452 GCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAA 166511 || ||||||||||||||||||||||| || |||| ||||| ||| | || || |||||| Sbjct 532 GCTTTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAA 473 Query 166512 ATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGC 166570 | ||||| ||| || | || || || ||||||||||| || |||||||| ||||| Sbjct 472 CTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGC 414 Query 166571 TGTCT 166575 |||| Sbjct 413 -GTCT 410 >seq2 Length=27864329 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 165169 GCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGT 165228 || |||||| | || |||||| || |||| || | |||||| | || || ||||||||| Sbjct 14827017 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAAGAAGATTTTCTGATGGT 14826958 Query 165229 ATGCCTCTTGGTATCTCTGGTACTTTTAACTATATG 165264 |||||||| || |||||||||||||| |||| |||| Sbjct 14826957 ATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATG 14826922 >seq10 Length=17599535 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 165241 ATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCAT 165300 |||||||||||||| |||| |||| | || |||| || || || |||||||||||||| Sbjct 16803128 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCAC 16803187 Query 165301 CCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCAT 165360 || || ||||| | || || | ||| |||||| |||| || | || || |||| || Sbjct 16803188 CCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTAT 16803247 Query 165361 GGAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAG--AACT 165418 || | | || ||||| | | | | || || ||| | || || | ||| Sbjct 16803248 GGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCAC--AAAAAATGAATCTGCTAACG 16803305 Query 165419 ACGGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCA 165470 | |||||| || || ||||||||||| || || ||||| || |||| || Sbjct 16803306 AAAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCA 16803357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563377215205760