Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq40249 547 8e-151 seq24705 477 1e-129 seq10 127 2e-24 seq13684 120 4e-22 seq3029 104 3e-17 seq1 87.8 2e-12 seq2 84.2 3e-11 >seq40249 Length=153482 Score = 547 bits (606), Expect = 8e-151 Identities = 723/1000 (72%), Gaps = 2/1000 (0%) Strand=Plus/Plus Query 124033 TGTAGACTCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAAC 124092 || || |||| ||| ||||||||||| ||||||||||| ||||| | |||||||||||| Sbjct 344 TGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAAC 403 Query 124093 TTCCATACCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTT 124152 ||||||||| | ||| || | ||| | || |||| |||| || | | ||| | Sbjct 404 TTCCATACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTG 463 Query 124153 AGCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGAT 124212 | |||||| ||||||||||| || ||||||||||| | |||||| ||||| || | || Sbjct 464 ACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAAT 523 Query 124213 ACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACT 124272 ||| | || || ||||| | || ||| || || || | |||| |||||| || | | Sbjct 524 ACCTAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGA 583 Query 124273 TCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGC 124332 | || |||||||| |||||| |||||||| | || ||||| |||||||| || || Sbjct 584 ACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGC 643 Query 124333 TACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTG 124392 ||| |||||||| |||||||||||||| ||||| | ||||| | || || || | Sbjct 644 TACAATGTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATT 703 Query 124393 CTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAA 124452 ||||| ||||| ||||| | | ||| || || | |||||||||||| || |||| Sbjct 704 TTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAAGAACCATGCATAGCACTAAATAG 763 Query 124453 AGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATG 124512 || || ||||| | || ||||| ||| |||||| || || ||||| |||||||| || Sbjct 764 GGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTG 823 Query 124513 CTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATC 124572 ||| || ||||| || | |||||||||||||||||| ||||| || || ||||||||||| Sbjct 824 CTCAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATC 883 Query 124573 AGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGG 124632 ||| || || ||||||| |||||| | ||||| ||||| ||||| | || || Sbjct 884 AGAAAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGG 943 Query 124633 TGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTG 124692 |||||||| |||||| |||||||||||||| || | | | | |||||||||| Sbjct 944 AGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTC 1003 Query 124693 TCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACC 124752 | ||||| || | | ||||| | ||||| | || | | | ||||||||| Sbjct 1004 ACGACCCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACC 1063 Query 124753 ACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCC 124812 ||| || || | |||||||||||| | ||| ||||||||||| ||||| || || | || Sbjct 1064 ACCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACC 1123 Query 124813 GATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAA-AG 124871 ||||| || | |||| || ||||| || || || ||||| || || ||||| || Sbjct 1124 AATAGCTGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCGTA-AAGAAGAG 1182 Query 124872 AACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAA 124931 | || | || ||||| | || || || ||||| || ||||| || ||||| ||||| | Sbjct 1183 ATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGA 1242 Query 124932 CGATGAAACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAA 124991 || ||| | | ||| || | |||| || ||||| | |||||||||||| |||| Sbjct 1243 TAATAAAAACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAA 1302 Query 124992 CATAAATTCTGTTGTTTGTTGATGTTACCCACTCACAGAA 125031 |||| | ||| | || |||| ||| | |||||| Sbjct 1303 TGTAAAGACGGTTTTCAGTACTAGTTATCCAGTTACAGAA 1342 Score = 376 bits (416), Expect = 3e-99 Identities = 706/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || || ||||| || || Sbjct 32951 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 32892 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | |||||| || || |||||||| Sbjct 32891 ATCTTGAGCCGCCATCCAAGCGCGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 32832 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 32831 AGTCTCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 32772 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| | |||||||| || | || | || |||| | ||| | || || || Sbjct 32771 TAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACTGGTAC 32712 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || ||||| Sbjct 32711 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 32652 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 32651 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 32592 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| || ||||| | || || Sbjct 32591 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 32553 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || |||| | || | || |||| || || || Sbjct 32552 ATTTTCTACAGTAGCACCATGAATAGCGCATAACAGAGCCGCGCCCAGTACACCAGCGAC 32493 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 32492 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 32433 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| ||||||||||| Sbjct 32432 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 32373 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || ||||||| | || || || || | |||||||||||| ||| || || Sbjct 32372 ATAAATTAGAAAGACAGAAACAAAAACAGCAATTGGACCAGAGAATGCGATTGCATTATA 32313 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| || || | |||||||| | | ||| |||||||| | | | Sbjct 32312 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 32253 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| ||| ||||| || | ||| |||||||| || Sbjct 32252 GAAAGCACCGTGGAGAGCAACAAAAGCCCACAGACCGCCTAATTGACACCAACGAGTAAA 32193 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 32192 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 32133 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||| || || || || | ||| ||| || | ||||| Sbjct 32132 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTAGCCAATCCATG 32073 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 32072 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCCAAAGCGAAATAGGC 32013 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||||||||| |||| || || || || || ||| |||||| Sbjct 32012 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 31953 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 31952 GTCATCCATAATATCAAA 31935 >seq24705 Length=1162 Score = 477 bits (528), Expect = 1e-129 Identities = 673/939 (72%), Gaps = 5/939 (1%) Strand=Plus/Minus Query 124061 GGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTTGCTCTGTTTAGA 124120 ||||||||||| ||||| | ||| ||||| ||||||||||| | ||| || | ||| | Sbjct 1160 GGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGGTTAGCACGGTTGATG 1101 Query 124121 ACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGATTGGTTAAAGTTG 124180 | |||| |||| || | | || | | |||||| || |||||||| || ||| Sbjct 1100 ATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGATTGGTTGAAATTG 1041 Query 124181 AAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAACCATACACATACA 124240 |||||||| | |||||| ||||| || | ||||| | || || ||||| | | ||| Sbjct 1040 AAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAGATTCCTACT 981 Query 124241 ACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAATGAAGCATACTGG 124300 ||||| || | || | ||||||||| | | | ||||||||||| |||||| ||| Sbjct 980 ACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGG 921 Query 124301 AAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGT 124360 ||||| | || ||||| ||||| || || || || || || || |||||||| ||||| Sbjct 920 AAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTTTCTTCCTCTTGA 861 Query 124361 CCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGAT 124420 || || || ||||| | || || || | || || ||||| |||| | | ||| Sbjct 860 CCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGACAA-ACTAGAA 802 Query 124421 GTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATTCCTGCTACTCCT 124480 || || | |||||||||||| || |||| || || ||||| | || ||||| ||| Sbjct 801 GTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACACCT 742 Query 124481 GCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTG 124540 |||||| || || ||||| |||||||| ||||| || ||||| || | |||||||||| Sbjct 741 AACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATCATAAAGTTG 682 Query 124541 AAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTAT 124600 |||||||| ||||| || | |||||||||||||| || || ||||||| ||||| Sbjct 681 AAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCTTCCTTGACCAATAGGGTAA 622 Query 124601 ACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGA 124660 | ||||| ||||| ||||| | || || |||||||| |||||| ||||||||| Sbjct 621 ATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGA 562 Query 124661 CGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCTGAAATACCAA-T 124719 ||||| || | | | | |||||||||| | ||||| || | | ||||| | Sbjct 561 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGT 502 Query 124720 AAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACAGT 124779 ||||| ||| | || | | || ||||||||||||||| || ||||| |||||||||| Sbjct 501 AAGGA-GTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCACTCATCAACAGA 443 Query 124780 TGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGC 124839 ||| |||||||| |||||||| ||||| | |||||| || || | || | || || Sbjct 442 TGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGTAGGGATAATAGC 383 Query 124840 ACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTC 124899 ||||||||| || ||||| ||||| | |||||||| | || || || | || || || Sbjct 382 ACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATC 323 Query 124900 GATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTA 124958 ||||| || ||||| || || || || || | || || ||| | | ||| || | || Sbjct 322 AATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACA-GAAGTTGCGGTCAATA 264 Query 124959 AGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 || || ||||| | |||||| ||||| || | |||| Sbjct 263 AGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAA 225 >seq10 Length=17599535 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124325 TGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGT 124384 || || | ||| |||||||| |||||||||||||| ||||| |||||| | ||| Sbjct 16803357 TGAGCAGTTACAATGTTGTAAGTTTCTTCTTCTTGACCGAATCTATAACTTTCGTTAGCA 16803298 Query 124385 GACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCT 124444 || || | | ||| |||| || |||| | ||| || || | | |||||| ||| | Sbjct 16803297 GATTCATTTTTTGTGGTTTTCCTAATTAAACTAGAAGTTACCAAAAAACCATACATAACA 16803238 Query 124445 GAGAATAAAGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGA 124504 ||||| || || | ||| | || |||| ||| ||||| || || ||||| ||| Sbjct 16803237 CTAAATAAGGAACCACTGAATACACCAACTACACCTAATATGTGAAATGGGTGCATAAGA 16803178 Query 124505 ATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGAT 124554 ||||| ||||| || |||| || | |||||||||||||||||| ||||| Sbjct 16803177 ATGTTGTGCTCAGCCGGGAATACAATCATAAAGTTGAAAGTACCAGAGAT 16803128 >seq13684 Length=3594 Score = 120 bits (132), Expect = 4e-22 Identities = 183/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || || Sbjct 266 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 207 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || |||||| || | || || || || | |||||| || || || ||||| Sbjct 206 ATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAA 147 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || |||||||| || || | Sbjct 146 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGGCACG 87 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 | ||| || || | || || | || |||| |||| | ||| |||| || || Sbjct 86 TAAGTTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTAC 27 Query 123106 GAACAACATAAGGAAGTGTAA 123126 || | ||||| ||| ||||| Sbjct 26 AAATAGCATAAAGAAATGTAA 6 >seq3029 Length=7874 Score = 104 bits (114), Expect = 3e-17 Identities = 180/260 (69%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 123649 TCCTTGTGCTTCAGGTCCCCAAAGGAACATGA--GACTATG---ACCCATTGCGTCACCA 123703 |||||||||||| || ||||| || | || | || | || | | |||| || Sbjct 5 TCCTTGTGCTTCGGGCCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGG-----CA 59 Query 123704 GGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCA 123763 || || || |||||||| |||||||| || || || | ||| ||| || | ||| Sbjct 60 GGGGTAGAAACTGCTGCGGTTAAGAAATTACAACCTTCCAAATAGGAACTAGCCAATCCA 119 Query 123764 TGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATAC 123823 || |||||||| || || || || || || ||| |||||||| || | | | ||| Sbjct 120 TGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCAACCCCCTAAAGCGAAATAA 179 Query 123824 GCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAAC 123883 |||||||| | || || || ||||||||||||| || || ||||| || || |||| Sbjct 180 GCACAAGGAAAGAGCAATAGGCCAGACCATCCTACAAAAACGAAACGGTCCCTTCGTAAC 239 Query 123884 CAGTCGTCAAGAACATCAAA 123903 ||||| || | | |||||| Sbjct 240 CAGTCATCCATAGTATCAAA 259 >seq1 Length=28635137 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 ||||||| | ||| || |||||||| ||||| | ||||| || ||||||||||| Sbjct 2316856 AATGGTGCTAAATGCTTCTTCACACCAATGGGACCCATTCCAGGCCCACCACCTCCATGA 2316797 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 ||||||||||| ||||| || | ||| ||||| || ||||| || ||| Sbjct 2316796 GGAATACAGAAGGTCTTGTGGAGATTGAGATGGCACACATCCGCTCCA 2316749 >seq2 Length=27864329 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 124531 CATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACC 124590 |||||||||||||||||| ||||| || || |||||||||||||| ||| | ||||| Sbjct 14826922 CATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAATCTTCTTTGACC 14826981 Query 124591 AAATGGGTATACTAAGAATACAGC 124614 || |||||| | ||||| ||||| Sbjct 14826982 AATTGGGTAGATCAAGAAAACAGC 14827005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578707098667480