Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq24705 581 4e-161 seq40249 574 6e-159 seq27683 224 1e-53 seq9 127 3e-24 seq3029 120 4e-22 seq10 120 4e-22 seq34986 113 6e-20 seq34187 105 9e-18 seq5 84.2 3e-11 >seq24705 Length=1162 Score = 581 bits (644), Expect = 4e-161 Identities = 704/952 (74%), Gaps = 5/952 (1%) Strand=Plus/Minus Query 26746 GGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCAGCACGGTTGAGA 26805 || || || || || || | |||||| || || || | ||||| ||||||||||| Sbjct 1160 GGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGGTTAGCACGGTTGATG 1101 Query 26806 ACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGACTGATTGAAGTTG 26865 | || |||||||| || | || ||||| || ||||| ||||| || ||||| ||| Sbjct 1100 ATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGATTGGTTGAAATTG 1041 Query 26866 AAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAACCAGATGCCAACA 26925 ||||| || || ||||||||||| || | ||| | || ||||||||||| || || Sbjct 1040 AAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAGATTCCTACT 981 Query 26926 ACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGG 26985 || ||||| ||||| | ||||||||| || ||||| ||||||||||| |||||||||| Sbjct 980 ACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGG 921 Query 26986 AAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGA 27045 ||||| || || || || || ||||| || || || || || || || ||||| |||||| Sbjct 920 AAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTTTCTTCCTCTTGA 861 Query 27046 CCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGGACGAGTGAAGAT 27105 || || || ||||| | || || ||| ||||||| || || | ||| | | || Sbjct 860 CCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGACAAACTA-GAA 802 Query 27106 GTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCG 27165 || |||| | || ||||||||| || || || || |||||||| ||||| ||||| Sbjct 801 GTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACACCT 742 Query 27166 AGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTA 27225 | |||||| || ||||||||||| || ||||| || ||||||||||||| ||| |||| Sbjct 741 AACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATCATAAAGTTG 682 Query 27226 AAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGGATAG 27285 |||||||||||||| || | ||||||| |||| || || |||||||| | ||| || Sbjct 681 AAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCTTCCTTGACCAATAGGGTAA 622 Query 27286 ACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGATCCATGGA 27345 | | ||| || ||| | ||||| || || ||||| |||||||| ||| ||||| ||| Sbjct 621 ATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGA 562 Query 27346 CGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCATAGATGCCGA-T 27404 |||||||| | ||| | |||||||||||||| ||||||||| | | || | | Sbjct 561 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGT 502 Query 27405 AAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCACTCATCGAGTGA 27464 |||| |||| | || | || | |||||||||| || || ||||||||||| | || Sbjct 501 AAGG-AGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCACTCATCAACAGA 443 Query 27465 TGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTTGGGACAACTGC 27524 ||| |||||||| |||||||| ||||| | ||||| || ||| | |||| || || Sbjct 442 TGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGTAGGGATAATAGC 383 Query 27525 ACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCACGAATACCGTC 27584 |||||| || || ||||| ||||| | | ||||||| ||| || ||||||||||| || Sbjct 382 ACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATC 323 Query 27585 AATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGTTGCTGCTAACA 27643 |||||| || || || || |||||||| |||| ||| || |||| |||||| | || | Sbjct 322 AATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAGA-AGTTGCGGTCAATA 264 Query 27644 GTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTGTTAGT 27695 || |||||||||| ||||||||||| || | || | ||| || | ||| Sbjct 263 AGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGT 212 >seq40249 Length=153482 Score = 574 bits (636), Expect = 6e-159 Identities = 723/993 (73%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 26724 CTCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAA 26783 |||| ||||||| || || | || || || || || || | ||| || || || || | Sbjct 350 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 409 Query 26784 TCCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATC 26843 ||||| ||||||||| | || || |||||||| || | ||||| || || ||| Sbjct 410 ACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATC 469 Query 26844 AATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAG 26903 || || || || ||||| |||||||| || || ||||||||||| || | ||| | Sbjct 470 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAA 529 Query 26904 TGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGA 26963 || || ||||| || || || || ||||| || || | |||||| || || ||||| || Sbjct 530 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 589 Query 26964 GTTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGAT 27023 |||||||| |||||||||||||||||| || || || || || || || || || || Sbjct 590 ATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAAT 649 Query 27024 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGT 27083 |||||| || ||||||||||||||||| | ||||| | || || ||| |||| || Sbjct 650 GTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 709 Query 27084 CGTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCC 27143 || || | || | ||| || |||| | || ||||||||| || || || || Sbjct 710 GGTTTCCCTGATCAAACTAGAAGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCC 769 Query 27144 ACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGC 27203 |||||||| ||||| ||||| | |||||| || ||||||||||| || ||||| || || Sbjct 770 GCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGC 829 Query 27204 CTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAA 27263 ||||||||||| ||| |||| |||||||||||||| || ||||||||| |||| || || Sbjct 830 CTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAA 889 Query 27264 AGAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGA 27323 | |||||||| | || |||| | ||| || ||| | ||||| || || ||||| || Sbjct 890 ACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGA 949 Query 27324 ATATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCC 27383 |||||| ||| ||||| ||||||||||| | ||| | |||||||||||||| || Sbjct 950 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 1009 Query 27384 CATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTT 27443 ||||||| | | || | | ||||| | || | |||| ||||||||||||| Sbjct 1010 CATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 1069 Query 27444 ATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGC 27503 || | ||| ||||| | ||||| ||||||||||| ||||| || || | ||| || || Sbjct 1070 GTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAGC 1129 Query 27504 ATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGC 27563 ||| | || | || ||||| ||||| || ||||| || || | ||| || |||| Sbjct 1130 TGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGA 1189 Query 27564 AACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA 27623 ||| |||||||||||||| |||||||| || || || || || |||||||||| ||| || Sbjct 1190 AACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAA 1249 Query 27624 GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAA 27683 | |||||| | || | || |||||||||| ||||| ||||| |||| || | Sbjct 1250 AACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1309 Query 27684 ACGGTTGTTAGTTGATGTCACCCACTCACAGAA 27716 |||||| | ||| || | ||| | |||||| Sbjct 1310 ACGGTTTTCAGTACTAGTTATCCAGTTACAGAA 1342 Score = 524 bits (580), Expect = 1e-143 Identities = 729/1019 (72%), Gaps = 2/1019 (0%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 32952 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 32893 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| | || | || | ||| || | ||||||||| || |||| Sbjct 32892 GATCTTGAGCCGCCATCCAAGCGCGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGA 32833 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | |||||| || ||||| || || || || || ||||| |||| Sbjct 32832 AAGTCTCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 32773 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || | ||| || || | | |||| || | | ||| | ||| | || || | Sbjct 32772 GTAGGTTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACTGGTA 32713 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||||| Sbjct 32712 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTG 32653 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| || || || | ||||| | | || | Sbjct 32652 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 32593 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || |||||| | |||| Sbjct 32592 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCAT 32533 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | | || || | ||||||| |||||| |||||||||||||| || |||| Sbjct 32532 GAATAGCGCATAACAGAGCCGCGCCCAGTACACCAGCGACTCCCATCATATGAAATGGGT 32473 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || |||| ||||| | ||| | || || ||||| |||| Sbjct 32472 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 32413 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| || || || | ||||| || || || ||||| | Sbjct 32412 CAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGAAAGACAGAAA 32353 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| |||||||| || || || ||||| || || || | | || ||| Sbjct 32352 CAAAAACAGCAATTGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAAC-AGAT 32294 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || |||||||| |||||||||||||||||||| | ||| || ||||||||||||||| Sbjct 32293 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCACCGTGGAGAGCA 32234 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 32233 ACAAAAGCCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 32174 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224 ||||| |||| | | |||||| | | | | |||||| || || || || || || Sbjct 32173 CCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTT 32114 Query 24225 AGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACA 24284 | ||| || ||| || | |||||||||||| | |||||| || ||||| || ||| Sbjct 32113 AAAAAATTGCAACCTTCTAAATAGGAACTAGCCAATCCATGAGTATACCATGAAGTTACA 32054 Query 24285 AAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGT 24344 || | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 32053 AAGGTTGTACCTGTGAACCAACCCCCCAAAGCGAAATAGGCACAAGGAAAGAGCAATAGA 31994 Query 24345 CCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||||||||| ||||| || ||||| |||| | |||||| |||| || ||||| Sbjct 31993 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 31935 >seq27683 Length=354 Score = 224 bits (248), Expect = 1e-53 Identities = 261/352 (74%), Gaps = 0/352 (0%) Strand=Plus/Plus Query 23655 TTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAA 23714 |||||| ||| ||||| || |||||||| |||||||| || || || || ||||| ||| Sbjct 3 TTATTGGAAAAAGCAACACCAAAGATTTGGGACCAAAAGCGGTTAGCAGTGACCATGGAA 62 Query 23715 TAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTTTGCCTGTTCTCCATCT 23774 || || || || | ||||| | | || || || || ||||| || || || Sbjct 63 TAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAAGGTATTTGCACCATCACCGTCC 122 Query 23775 TCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGT 23834 ||| | || || || || || || ||||||||||||| | || || || | || | | Sbjct 123 TCAAATAGAGTGTTTTCTACGGTCGCTCCATGAATAGCGCATAGCAGAGCCGCACCTAAT 182 Query 23835 ATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGG 23894 | || ||||||||||||||||| || ||||| | |||||| |||||||| || |||| | Sbjct 183 ACTCCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAG 242 Query 23895 AAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGAC 23954 || || | ||| | || ||||| || || || ||||||||||||||||||||| || Sbjct 243 AAAAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGAT 302 Query 23955 TGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAG 24006 || |||| ||||| || ||||||||||| || || |||||||| ||||||| Sbjct 303 TGCCCCAGTGGATAAATAAGGAATACAGAAACAAAAACAGCAATTGGACCAG 354 >seq9 Length=37155481 Score = 127 bits (140), Expect = 3e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 || ||||| ||||||||||||| ||||| || |||||||||| ||||||||| | || Sbjct 8544455 GTCTCAATGGTAACATCAGAAGTAGGATAAGCCGCACAAGTGAGAACAAACCCTGCAGCA 8544514 Query 32693 ATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCAGATACAATCTTA 32752 || || |||||||| | ||| ||| ||| ||||| || |||||| |||| ||| Sbjct 8544515 ATCTGGTCATCATCGAGGAAACTCTGGTCAGACTGGTCAACAAAACCAGACACAACTTTA 8544574 Query 32753 CCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCC 32812 |||||||| || || | ||| ||||| |||||||| || || | ||| ||||| Sbjct 8544575 CCTGCACAGCTCGAGCAAGAACCGGCACGGCAAGAGTAAGGCAAGTCGATCCCTGCTTCC 8544634 Query 32813 TCTGCTGCATCAAGGATGTA 32832 || || || || |||| ||| Sbjct 8544635 TCCGCAGCGTCGAGGACGTA 8544654 >seq3029 Length=7874 Score = 120 bits (132), Expect = 4e-22 Identities = 177/248 (71%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 24147 TCCCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGC 24206 || ||||| | || || ||||| ||||| | | ||| || | | | | ||||| Sbjct 3 TCTCCTTGTGCTTCGGGCCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGG 62 Query 24207 GTCGAGACAGCTGCCGT-AAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATG 24265 || || || ||||| || |||||| ||| ||| || | |||||||||||| | |||||| Sbjct 63 GTAGAAACTGCTGCGGTTAAGAAA-TTACAACCTTCCAAATAGGAACTAGCCAATCCATG 121 Query 24266 GGTGTACCAACTCGTAACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGC 24325 ||| |||||| || ||||||| ||| || |||| |||||| || | || | |||||| Sbjct 122 GGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGC 181 Query 24326 AGTGGGAAGAAGTAGGAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCA 24385 | |||| || | || |||||||| || ||||| || || || |||| | | ||| Sbjct 182 ACAAGGAAAGAGCAATAGGCCAGACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCA 241 Query 24386 GTCGTCCA 24393 ||| |||| Sbjct 242 GTCATCCA 249 >seq10 Length=17599535 Score = 120 bits (132), Expect = 4e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 27019 ACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTT 27078 || |||||||| || ||||||||||||||||| |||||| | ||| || ||| || Sbjct 16803348 ACAATGTTGTAAGTTTCTTCTTCTTGACCGAATCTATAACTTTCGTTAGCAGATTCATTT 16803289 Query 27079 TCAGTCGTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGA 27138 | || || | | | | ||| || |||| | || | |||| || || | Sbjct 16803288 TTTGTGGTTTTCCTAATTAAACTAGAAGTTACCAAAAAACCATACATAACACTAAATAAG 16803229 Query 27139 GATCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGT 27198 || |||| |||||| ||| | ||||| | ||||| || ||||||||||| || ||||| Sbjct 16803228 GAACCACTGAATACACCAACTACACCTAATATGTGAAATGGGTGCATAAGAATGTTGTGC 16803169 Query 27199 TCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGAT 27239 || ||| ||||||||| ||| |||| |||||||||||||| Sbjct 16803168 TCAGCCGGGAATACAATCATAAAGTTGAAAGTACCAGAGAT 16803128 >seq34986 Length=93546 Score = 113 bits (124), Expect = 6e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 || ||||| ||||||| |||| |||| || |||||||||| || || ||||| || Sbjct 33705 GTCTCAATGGTAACATCGAAAGTAAGATAAGCCGCACAAGTGAGAACGAATCCTTCCGCA 33646 Query 32693 ATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCAGATACAATCTTA 32752 || || |||||||| | ||| ||| ||| ||||| || | ||||| |||| ||| Sbjct 33645 ATCTGGTCATCATCGAGGAAACTCTGGTCAGACTGGTCAACAGATCCAGACACAACTTTA 33586 Query 32753 CCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCC 32812 |||||||| || |||| ||| ||||| |||||||| || || | || ||||| Sbjct 33585 CCTGCACAGCTCGAGCAGGAACCAGCACGGCAAGAGTAAGGCAAGTCGATTCCGGCTTCC 33526 Query 32813 TCTGCTGCATCAAGGATGTA 32832 || || || ||||||| ||| Sbjct 33525 TCAGCAGCGTCAAGGACGTA 33506 >seq34187 Length=13517 Score = 105 bits (116), Expect = 9e-18 Identities = 95/117 (81%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 23994 GCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAG 24052 ||||| |||||||| || || || ||||| || || || | | || ||| || || || Sbjct 414 GCAATTGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAAC-AGATCGAGCAAG 472 Query 24053 TTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAA 24109 |||||| |||||||||||||||||||| | ||| || |||||||||||||||||||| Sbjct 473 TTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCACCGTGGAGAGCAACAAA 529 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 23829 CCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCC 23888 ||||||| |||||| |||||||||||||| || ||||| | ||||| |||||||| | Sbjct 306 CCCAGTACACCAGCGACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCGT 365 Query 23889 TGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAA 23940 |||| ||| | | ||| | || || ||||| ||||| ||||| | ||||| Sbjct 366 TGGAAAAAGTGGATGAATCGAAATATAGCCGCTACACCAAAACTAGACGCAA 417 >seq5 Length=23960834 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 32621 TCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACA 32680 ||||||| | ||||| || | |||||||||||||| || || ||||| || || ||| Sbjct 8106922 TCTTCTTTGTGGGTTTCGATGACGACATCAGAAGTTGGGTAAGCGACACAGGTAAGGACA 8106981 Query 32681 AACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTA-CC 32739 |||| || || || ||||| || ||||| ||| || | ||||| | || | || Sbjct 8106982 TACCCCTCGCTCATCTGGTCATCGTCTAAGAAGCTCTGGTCCGTCTGGTC-AATGAAGCC 8107040 Query 32740 AGATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATC 32799 ||| || | || ||||| || ||| || | ||||| || || ||||| ||||| Sbjct 8107041 AGAGACGACTTTCCCTGCGCAGCTTGAGCAAGATCCTGCGCGGCATGAGTAAGGCAAATC 8107100 Query 32800 AACCCCACCTTCCTCTGCTGCATCAAGGATGTA 32832 | || ||||||| || || || |||| ||| Sbjct 8107101 GATACCTGCTTCCTCCGCAGCGTCGAGGACGTA 8107133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665159581448680