Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq40249 630 8e-176 seq24705 590 7e-164 seq27683 188 8e-43 seq13684 156 5e-33 seq10 125 8e-24 seq38010 96.9 4e-15 seq34342 93.3 5e-14 >seq40249 Length=153482 Score = 630 bits (698), Expect = 8e-176 Identities = 736/994 (74%), Gaps = 0/994 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||| | ||| | || || || | |||||||| || | || ||||||||| | Sbjct 1343 CTTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1284 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCC 165887 |||||| || || | ||| | |||||| | || || |||| ||||| |||||||| Sbjct 1283 GATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 1224 Query 165888 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAA 165947 || || || || || || || |||||||| || |||| ||||| | || || ||||| Sbjct 1223 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 1164 Query 165948 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCAT 166007 || || || ||||| || |||| |||| || |||||| | || || || || || Sbjct 1163 TATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 1104 Query 166008 CTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGT 166067 ||||||||| ||||| |||| |||||||| || ||||||||||||| |||| |||| Sbjct 1103 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGT 1044 Query 166068 CTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 166127 | ||||| | |||| | | || |||||||||||||||||||| || ||| Sbjct 1043 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 984 Query 166128 TCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGC 166187 ||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | ||| Sbjct 983 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 924 Query 166188 AGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 166247 || ||| | | || || | |||||||| ||||| ||||||| ||||| || ||||| Sbjct 923 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 864 Query 166248 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 166307 ||| || || ||||||| ||| | || ||||| ||||||||||| ||||| ||||| || Sbjct 863 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 804 Query 166308 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 166367 || || ||| | || || ||||| ||||| || ||| | |||||||||||||| || Sbjct 803 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 744 Query 166368 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 166427 |||||| |||||| | | | || || || || |||| ||||| || | || Sbjct 743 TTCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 684 Query 166428 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 166487 ||||| ||||| |||||||||||||| |||||||| ||||| ||||| ||||| || || Sbjct 683 TTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 624 Query 166488 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 166547 || |||||||||||||| ||| |||||||| || || || || || |||||| | || Sbjct 623 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 564 Query 166548 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 166607 || ||||| || || || || ||||| || || | || | || ||||| ||||| Sbjct 563 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 504 Query 166608 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 166667 ||| || |||||||| |||||||| || | ||||| |||| || ||||| | || || Sbjct 503 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 444 Query 166668 CTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGC 166727 ||||| ||| || ||||||| ||| || |||||||||||||||||||| ||||| || Sbjct 443 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 384 Query 166728 ACACAACTTCCCCCTCGACCTCGCTGCTGCTGAG 166761 ||||||||||| || ||||| ||||||| |||| Sbjct 383 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 350 Score = 542 bits (600), Expect = 3e-149 Identities = 735/1020 (72%), Gaps = 6/1020 (1%) Strand=Plus/Plus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | ||||||||| | ||||| || || |||||||| || |||||||| Sbjct 31935 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 31994 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | || ||||| ||| ||| | ||| | || |||||| | || || || || || Sbjct 31995 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTGGGGGGTTGGTTCACAGGTACAACCTTT 32054 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGC--GTCCAGTTATCTTGAGGGTGCGAACTTTC 167191 || || ||||||||||||||| | || || | ||| | || ||| || ||| Sbjct 32055 GTAACTTCATGGTATACTCATGGATTGGCTAGTTCC--TATTTAGAAGGTTGCAATTTTT 32112 Query 167192 TTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATGGG 167251 | || || |||||| |||||| || || | | | |||||||| | | || |||| Sbjct 32113 TAACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGG 32172 Query 167252 GTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTTTG 167311 |||||||| | ||||| ||||| | ||| ||| | || || || |||||||||| Sbjct 32173 GTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTG 32232 Query 167312 TGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTC 167371 | || |||||||| || || || | || ||||| ||| | || || ||||||||||||| Sbjct 32233 TTGCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTC 32292 Query 167372 GC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTTC 167430 | ||| | | | || || || ||||| || || ||||||||||| |||||||| || Sbjct 32293 GATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTT 32351 Query 167431 GTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTTC 167490 ||| || || || | ||||| || |||||| | ||||||||||| || || Sbjct 32352 GTTTCTGTCTTTCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTT 32411 Query 167491 GGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACACTG 167550 || || || || || || |||||| ||||||| ||||||| || || || |||||| || Sbjct 32412 GGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTG 32471 Query 167551 AATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATC 167610 || ||||||||||||||||| || || ||| | ||||| | || || | | || || Sbjct 32472 AACCCATTTCATATGATGGGAGTCGCTGGTGTACTGGGCGCGGCTCTGTTATGCGCTATT 32531 Query 167611 CATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAG 167670 ||||||| ||| ||||| |||||||| | |||||||||||| ||||| || || Sbjct 32532 CATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 32591 Query 167671 GCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGG 167730 || || | | ||||| | ||||| |||||||||||||| || || ||||| || ||| Sbjct 32592 GCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 32651 Query 167731 TCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTC 167790 || || ||||| || ||||||| ||| ||||| ||| | ||||||||||||||||| Sbjct 32652 TCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 32711 Query 167791 GTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTT 167850 || || || | || | |||| | |||| | | ||||| ||| | || || Sbjct 32712 GTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTA 32771 Query 167851 CGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACT 167910 ||||| || || |||||||| || || ||| | || ||||| ||||| || ||||| ||| Sbjct 32772 CGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACT 32831 Query 167911 TTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGAT 167970 |||||||||||||| || ||| | || |||||| |||| || ||| | || || ||| Sbjct 32832 TTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGAT 32891 Query 167971 CAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 || |||||||| ||| || | ||||| ||||| ||||| ||||| || ||||| || ||| Sbjct 32892 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 32951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | |||||||||||||||| || ||||| ||| ||||||| ||||||||||| Sbjct 108154 CTCCCGTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGATTGGTCGTA 108095 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||| ||||||| Sbjct 108094 GGTTCGAATCCTACTTGGGGAG 108073 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | |||||||||||||||| || ||||| ||| ||||||| ||||||||||| Sbjct 128610 CTCCCGTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGATTGGTCGTA 128669 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||| ||||||| Sbjct 128670 GGTTCGAATCCTACTTGGGGAG 128691 >seq24705 Length=1162 Score = 590 bits (654), Expect = 7e-164 Identities = 717/973 (74%), Gaps = 3/973 (0%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | || ||||| || |||| ||||| ||| | Sbjct 190 CTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTT 249 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||||||||| | Sbjct 250 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 308 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || ||||| || || |||||||| | | ||||| |||| Sbjct 309 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 368 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||||||||| || | || |||| || || || | ||||| || || | Sbjct 369 ATATTATCTCTGGTGCTATTATCCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 428 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| || ||| | || || |||||||||| | || ||| Sbjct 429 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTG 488 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | |||| | | |||| | | || |||||||||||||||||||| || || Sbjct 489 TTCTACACTCCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 548 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 |||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | || Sbjct 549 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 608 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | || ||| | |||||||| || || ||||||| ||||| | |||| Sbjct 609 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 668 Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306 |||| || || ||||||| ||| | || ||||| ||||||||||| ||||| ||||| | Sbjct 669 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 728 Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366 | || || ||| | || || ||||| ||||| || ||| | |||||||||||||| | Sbjct 729 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 788 Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426 | |||||| |||||| | | || || || || ||||||| ||||| || | | Sbjct 789 GTTCTTTGGTAACTTCTAGTTT-GTCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 847 Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486 ||||||| || || ||||| |||||||| || || || || || ||||||||||| || | Sbjct 848 GTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTG 907 Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546 | || || ||||||||||| ||| ||||||||||| || || || ||||||||| | | Sbjct 908 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 967 Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606 |||| |||||||| || || ||||||||||| || | || | || ||||| |||| Sbjct 968 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 1027 Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666 |||| || |||||||| |||||||| || | ||||| |||| ||||| || | || | Sbjct 1028 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 1087 Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726 | ||||| ||| | | ||||| ||| || ||||||||||| ||||| || ||||| | Sbjct 1088 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATG 1147 Query 166727 CACACAACTTCCC 166739 | ||||||||||| Sbjct 1148 CTCACAACTTCCC 1160 >seq27683 Length=354 Score = 188 bits (208), Expect = 8e-43 Identities = 254/354 (72%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 167411 CTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCT 167470 ||||||| |||||||| || ||| || |||||| | ||||| || || ||| | | Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 167471 GGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAG 167530 |||||||||| ||| || || || || || || || |||||| |||| ||| |||||| Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAG 235 Query 167531 GATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTG 167590 |||| || || ||||| |||| ||||||||||||||||| || || || | | |||| Sbjct 234 GATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGTG 175 Query 167591 GTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTG 167650 || |||| | || || ||||| | || ||||| || ||| | | ||| || |||| Sbjct 174 CGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGTG 115 Query 167651 AGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGG 167710 | ||||| || || || || | | ||||| | ||||| |||||||| |||| Sbjct 114 ATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGG 55 Query 167711 TTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAAC 167764 | || || ||||| || ||||| || ||||| || ||||||| ||| |||| Sbjct 54 TCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAAC 1 >seq13684 Length=3594 Score = 156 bits (172), Expect = 5e-33 Identities = 193/264 (73%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 167767 TGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGC 167826 ||| | |||||||||||| |||| || ||||| | || | |||| | |||||| Sbjct 3 TGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGC 62 Query 167827 ATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCG 167886 | |||| ||||||| || | ||||| || || || ||||| || || ||| | || Sbjct 63 GTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 122 Query 167887 GCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTT 167946 ||||| ||||| || ||||| |||||||| || ||||| || ||| | || || ||| || Sbjct 123 GCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATT 182 Query 167947 CGAGCATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTT 168006 || || ||| | ||| || ||||| |||||||| || || | ||||| ||||| ||| Sbjct 183 CGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTT 242 Query 168007 CTCCCACGAGGCAACGCACTATAA 168030 || ||||| || ||||| || ||| Sbjct 243 CTACCACGTGGAAACGCTCTTTAA 266 >seq10 Length=17599535 Score = 125 bits (138), Expect = 8e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 166244 GAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGC 166303 ||||||| || || ||||||| ||| | || |||| ||||||||||| ||||| |||| Sbjct 16803126 GAATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGC 16803185 Query 166304 ATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGC 166363 | || || || || | || || | ||| ||||| |||| || ||||||| |||| Sbjct 16803186 ACCCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGT 16803245 Query 166364 ACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACT 166423 | || |||||| |||||| | | |||| | || || ||| ||||| ||| Sbjct 16803246 ATGGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACG 16803305 Query 166424 ACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCA 166475 | |||| | ||||| |||||||||||||| |||||||| ||| | ||||| Sbjct 16803306 AAAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCA 16803357 >seq38010 Length=70015 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 166606 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 166665 ||||| || |||||||| |||||||| || | ||||| |||| || ||||| || || Sbjct 45327 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 45386 Query 166666 ACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGA 166718 || ||||| ||| || ||||||| ||| || ||||||||||||||| |||| Sbjct 45387 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGTATGA 45439 >seq34342 Length=12685 Score = 93.3 bits (102), Expect = 5e-14 Identities = 76/90 (84%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 18118 CCTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGT 18177 || ||||| |||||||||||||||| || ||||| ||| ||||||| |||||||||| Sbjct 11515 CCCCCCTTG-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGATTGGTCGT 11573 Query 18178 AGGTTCAAATCCTACCTGGGGAG--TTGTT 18205 |||||| |||||||| ||||||| ||||| Sbjct 11574 AGGTTCGAATCCTACTTGGGGAGATTTGTT 11603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560965629115600