Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq9 136 3e-27 seq3 131 1e-25 seq7 118 7e-22 seq10 116 2e-21 seq4 116 2e-21 seq8 111 1e-19 seq5 111 1e-19 seq6 100 2e-16 seq3787 95.1 8e-15 seq1 91.5 1e-13 >seq9 Length=37155481 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| ||| ||||||||||||||| ||||| | ||| |||| |||| || Sbjct 16984034 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 16984093 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || |||||||| || || ||||||||| | || | ||| |||||||| | Sbjct 16984094 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGG 16984153 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| |||||| | || | || | ||| || |||| || ||||||||| Sbjct 16984154 ATTTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACCTCAAGTGTGATGGTCTTT 16984213 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || ||||| ||||||||||||||| Sbjct 16984214 CCGGTAAGAGTCTTCACAAAGATCTGCATG 16984243 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||||| | || |||||||||| || ||||||||| ||||| || |||| Sbjct 24150851 TCCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 24150910 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || | | | || ||||| ||||| |||||||||||||| || |||||||| |||| Sbjct 24150911 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 24150970 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || |||||||| | || || || || | |||| || | ||||| Sbjct 24150971 GATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 24151030 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| ||||| ||||| ||||| || |||||||||||||| Sbjct 24151031 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 24151078 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | | ||| ||||| || |||| ||| ||||||||| ||||| ||||| | Sbjct 16984700 CCTCCACGGAGCCTGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCG 16984759 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || |||||||| ||||||||||| || | |||||| || | || Sbjct 16984760 AGAGTACGTCCATCCTCGAGTTGCTTCCCGGCGAAGATAAGCCTTTGCTGATCCGGTGGG 16984819 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | || | || || Sbjct 16984820 ATTCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCCACC 16984879 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct 16984880 TCAAGGGTGATGGTCTTTCCTGTGAGAGTCTTAACGAAGATCTGCAT 16984926 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| || ||||||||| |||| ||||| | || |||| | || Sbjct 30362456 AGGACGAGATGAAGCGTCGACTCCTTCTGGGTGTTGTAGTCGGCGAGCGTGCGTCCGTCT 30362397 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| |||||||| |||||||| |||||||| | || | || |||||||| Sbjct 30362396 TCCAGCTGCTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 30362337 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || || |||||| || | ||| || Sbjct 30362336 TGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGAT 30362281 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || |||||||||||||| Sbjct 30362280 TGTTTTTCCCGTAAGGGTTTTCACAAAGATCTGCAT 30362245 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||| ||||| ||||| ||||| | |||| |||| |||| Sbjct 16960260 AGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCTAGGGTGCGACCATCC 16960319 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||||| || |||||||| | || | || || ||||| Sbjct 16960320 TCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCT 16960379 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||| ||| | || | || ||| || || | || |||||| Sbjct 16960380 TGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTAATGGTC 16960439 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| |||||||||||||| Sbjct 16960440 TTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960471 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||| ||| | || ||||||||||||||||||||| | | | | || |||| Sbjct 16960487 CAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCCAAGGTACGACCATC 16960546 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| ||||||| || |||||||| | || | || || ||||| Sbjct 16960547 CTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTC 16960606 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| ||| ||| | || | || ||| || || | || ||||| Sbjct 16960607 TTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTAATGGT 16960666 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || || ||||| |||||||||||||| Sbjct 16960667 CTTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960699 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||| || || | || |||||| |||||||| ||||| | ||| | ||| | Sbjct 16960940 CCTGAGGACGAGATGCAAAGTTGACTCCTTTTGAATGTTGTAGTCAGCGAGGGTACGCCC 16960999 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || || ||||| ||||| ||||||| || |||||| || || || | || || || Sbjct 16961000 ATCTTCAAGCTGCTTACCGGCAAAGATCAATCTTTGCTGATCCTGAGGAATACCTTCTTT 16961059 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 || | || || ||| ||| | || | ||| | ||| || || | || || Sbjct 16961060 ATCCTGAATCTTGGCTTTAACGTTGTCGATGGTATCAGAGCTCTCCACCTCCAAAGTGAT 16961119 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || ||||| || ||||||||||| Sbjct 16961120 CGTCTTCCCTGTCAGTGTCTTAACGAAGATCTGCAT 16961155 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || | || ||||| ||| | || ||||||||| || || || || | Sbjct 16984472 CCTCCACGCAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCG 16984531 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | | || || || ||||| || || ||||||| || |||||||| | || Sbjct 16984532 AGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGA 16984591 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || ||| ||| | || | || | ||| || Sbjct 16984592 ATACCCTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCACC 16984651 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || |||||||| ||||| ||||| |||||||||||||| Sbjct 16984652 TCGAGCGTGATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||| ||||| ||||| | || | || |||| || || || ||||| ||||||||| Sbjct 26352608 TTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGATC 26352549 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 | ||| ||||| || | || | || || ||||| | || || ||||| || | Sbjct 26352548 AATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGAC--AT--T 26352493 Query 34910 ATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||| || || |||||| || | ||| |||||||| || || ||||| || || Sbjct 26352492 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCAC 26352433 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 26352432 GAAGATCTGCAT 26352421 >seq3 Length=31725688 Score = 131 bits (144), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 11141079 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCC 11141020 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||||||| |||||||| | || | || |||||||| Sbjct 11141019 TCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 11140960 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || || |||||| || | ||| || Sbjct 11140959 TGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGAT 11140904 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||||||||| || || ||||||||||| Sbjct 11140903 TGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCAT 11140868 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||| ||||| || ||| ||||||||||| || |||| | | |||| |||| Sbjct 13311184 CAAGACCAAGTGAAGAGTTGACTCTTTCTGAATGTTGTAATCCGCCAAGGTGCGACCATC 13311125 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||||||||| ||||||| | |||||||| | || | |||||||| || Sbjct 13311124 TTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATC 13311065 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || || | || | ||| | ||| || || | || || || Sbjct 13311064 CTGGATCTTGGCCTTAACATTGTCAATAGTGTCAGAGCTCTCAACCTCCAAAGTGATAGT 13311005 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || | |||||| |||||||||||||| Sbjct 13311004 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 13310972 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||||| ||||| || ||||||||| ||||| ||||| | | | | | | | Sbjct 13310959 CCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCC 13310900 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 || |||| ||||| ||||||||||| || | ||||| || | || | |||||||| Sbjct 13310899 GTCTTCCAACTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGGATTCCCTCCTT 13310840 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 || | || || || ||| | || | || | ||| || || | ||| || Sbjct 13310839 ATCCTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGAT 13310780 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||| ||||| || || || ||||||||||| Sbjct 13310779 GGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 13310744 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| || |||||||||| || || ||||| ||||||||||| | | | || | Sbjct 13311415 CCTGAGCACCAGGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGACC 13311356 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || || || || || ||||||||||| | ||||||||| | || | ||||| || Sbjct 13311355 ATCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTT 13311296 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 ||| | ||||| ||| ||| | || | || ||| || || | || || Sbjct 13311295 GTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGAT 13311236 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| || | ||||| || |||||||||||| Sbjct 13311235 CGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCATG 13311199 >seq7 Length=22597724 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 |||||| |||| | || |||| ||||| || ||||||||| ||||| ||||||| Sbjct 8143598 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 8143657 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || | | | | || ||||| ||||| |||||||||||||| || |||||||| | || Sbjct 8143658 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 8143717 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || |||||||| | || || || || | |||| || | ||||| Sbjct 8143718 GATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 8143777 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| ||||| ||||| ||||| || |||||||||||||| Sbjct 8143778 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 8143825 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| || ||||||||| ||||| ||||| | ||| | || | || Sbjct 13483612 AGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCT 13483553 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||||||||| ||||| |||||||| | || | || |||||||| Sbjct 13483552 TCGAGCTGTTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 13483493 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| || | ||| |||||| Sbjct 13483492 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 13483433 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||||||||| || || ||||||||||| Sbjct 13483432 TTCCCCGTGAGGGTTTTCACGAAGATCTGCAT 13483401 >seq10 Length=17599535 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| ||| |||||||||||| ||||| |||| || | || |||| || Sbjct 17168573 ACAAGGTGAAGGGTAGACTCCTTCTGAATATTATAATCCGCAAGCGTACGACCATCCTCA 17168514 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || || |||||||| |||| ||||||||| | || | || |||||||| | Sbjct 17168513 AGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGA 17168454 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || ||| ||||||| | |||| ||| | ||| || || | ||| || || || Sbjct 17168453 ATCTTTGCTTTGACGTTGTCAATCGTGTCAGAGCTCTCAACCTCCAAGGTAATTGTTTTA 17168394 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | |||||| |||||||||||||| Sbjct 17168393 CCGGTCAAGGTCTTGACAAAGATCTGCAT 17168365 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | || ||||||||| || || || || | || |||| |||| Sbjct 17168349 CAGAACAAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCGAGTGTGCGTCCATC 17168290 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || | |||||||| | || | || |||||||| Sbjct 17168289 CTCTAGCTGCTTACCGGCGAAGATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTC 17168230 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||| || || | ||| ||||| Sbjct 17168229 CTGGATCTTAGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCAACCTCGAGGGTGATGGT 17168170 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | ||||| |||||||||||||| Sbjct 17168169 CTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 17168137 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/217 (69%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | || ||||||||| || || || || | || |||| |||| Sbjct 17168121 CAGAACAAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCGAGTGTGCGTCCATC 17168062 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || | |||||||| | || | || |||||||| Sbjct 17168061 CTCTAGCTGCTTACCGGCGAAGATAAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTC 17168002 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||| | ||||||| ||| | |||||| || | || | Sbjct 17168001 CTGGATCTTAGCCTTGAC----GTTATCGATGGTGTCAGAGCTCTCGACCTCGAGAGTAA 17167946 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || ||||| || || || || || ||||| Sbjct 17167945 TGGTCTTGCCGGTGAGCGTTTTCACGAAAATTTGCAT 17167909 >seq4 Length=18984343 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| ||||| | ||| | | | | || Sbjct 357481 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTCCCGTCC 357540 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || |||||||| |||| | || |||||||| Sbjct 357541 TCGAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCT 357600 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| || | ||| || || Sbjct 357601 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTT 357660 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| ||||| || || ||||||||||| Sbjct 357661 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 357692 >seq8 Length=21613650 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| ||| |||||| |||||||| ||||| | ||| |||| |||| || Sbjct 12585456 ACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 12585397 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || |||||||| |||||||| || || ||||||||| | || | | |||||||| | Sbjct 12585396 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGTCTTCCTTGTCTTGG 12585337 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | || | || | ||| || || | || ||||||||| Sbjct 12585336 ATCTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGATGGTCTTT 12585277 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | | |||| |||||||||||||| Sbjct 12585276 CCGGTTAAGTTCTTGACAAAGATCTGCAT 12585248 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| | || | | | || || || ||||| |||||||| Sbjct 12585211 CTCCTTCTGGATGTTGTAGTCAGCCAGAGTTCTACCGTCTTCAAGCTGCTTGCCGGCGAA 12585152 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| | |||||||| | || | ||| |||||||| | || || ||| || Sbjct 12585151 GATCAACCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTCAC--- 12585095 Query 34906 TGCTATCGATTCATTGG----CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | |||||| | | |||||| |||| ||| || |||||||| || | ||||| Sbjct 12585094 -GTTGTCGATTGTGTCGGAACTCTCGACCTCAAGGGTGATCGTCTTTCCGGTCAAGGTCT 12585036 Query 34962 TTACAAAGATCTGCAT 34977 | || ||||||||||| Sbjct 12585035 TGACGAAGATCTGCAT 12585020 >seq5 Length=23960834 Score = 111 bits (122), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| | | | || |||| |||| ||||| ||||| || Sbjct 16975267 CTCCTTCTGAATGTTGTAGTCGGCCAATGTACGACCATCCTCCAACTGCTTGCCGGCAAA 16975208 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| |||| | ||||||||||| | ||| || ||||| Sbjct 16975207 GATCAAACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGTATCTTAGCCTTGAC--- 16975151 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | ||||||| || | ||| || || | || || ||||||||||| | ||||| Sbjct 16975150 -GTTATCGATGGTGTCGGAGCTCTCCACCTCGAGTGTGATCGTCTTTCCCGTTAAGGTCT 16975092 Query 34962 TTACAAAGATCTGCATG 34978 | ||||||||||||||| Sbjct 16975091 TGACAAAGATCTGCATG 16975075 Score = 98.7 bits (108), Expect = 6e-16 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||| || || | || ||||||||| |||| || || | |||| | | | | Sbjct 16974835 CCTGAGGACGAGATGTAGAGTCGACTCCTTCTGGGTGTTGTAATCGGCTAGGGTTCTCCC 16974776 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 || || || ||||||||||||| ||| || | ||||| || | || | |||||||| Sbjct 16974775 CTCCTCGAGCTGCTTTCCGGCGAGGATGAGCCTCTGCTGATCCGGAGGAATACCCTCCTT 16974716 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGG 34937 ||| | || || ||| || || | ||||| ||| | || || |||| || Sbjct 16974715 GTCTTGAATCTTGGCTTTAAC--AT--TGTCGATGGTGTCAGAGCTTTCCACCTCAAGGG 16974660 Query 34938 TTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || |||||||||||||| ||||| || ||||||||||| Sbjct 16974659 TGATCGTCTTTCCCGTGAGTGTCTTAACGAAGATCTGCAT 16974620 Score = 98.7 bits (108), Expect = 6e-16 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||| || || | || ||||||||| ||||| || || | |||| | | | | Sbjct 16975063 CCTGAGGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCTCCC 16975004 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 || || || ||||||||||||||||| || | ||||| || | || | |||||||| Sbjct 16975003 GTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCCTCCTT 16974944 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGG 34937 ||| | || || ||| || || | ||||| ||| | || || |||| || Sbjct 16974943 GTCTTGAATCTTGGCTTTAAC--AT--TGTCGATGGTGTCAGAGCTTTCCACCTCAAGGG 16974888 Query 34938 TTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || ||||||||||| | |||||| | |||||| ||||| Sbjct 16974887 TGATCGTCTTTCCCGTTAAGGTCTTGAAAAAGATATGCAT 16974848 >seq6 Length=26286742 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||||||||| || ||||||||| || || || || | | | | | | || Sbjct 15796484 CAAGACCAGGTGAAGCGTAGACTCCTTCTGGATATTGTAATCAGCCAAGGTCCTGCCGTC 15796425 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||||||||||||||| || | ||||| || | || | || |||||||| Sbjct 15796424 TTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTC 15796365 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||| ||| | || | ||| | || || |||| ||| ||||| Sbjct 15796364 CTGAATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGT 15796305 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| |||||||| || |||||||||||||| Sbjct 15796304 CTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 15796272 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| || |||| ||| | || ||||||||| ||||| ||||||| | | || | Sbjct 15796715 CCTTAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACC 15796656 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || || || || || ||||||||||| | ||||||||| | || | ||||| || Sbjct 15796655 ATCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTT 15796596 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 ||| | ||||| ||| ||| | || | || ||| || || | || || Sbjct 15796595 GTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGAT 15796536 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| || | ||||| || |||||||||||| Sbjct 15796535 CGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCATG 15796499 >seq3787 Length=174 Score = 95.1 bits (104), Expect = 8e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||||| | || |||||||||| || ||||||||| ||||| || |||| Sbjct 26 TCCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 85 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || | | | || ||||| ||||| |||||||||||||| || |||||||| |||| Sbjct 86 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 145 Query 34870 CACCCCCTCCTTGTC 34884 | || |||||||| Sbjct 146 GATACCTTCCTTGTC 160 >seq1 Length=28635137 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||| ||||| || ||||||||| ||||| || || | | | |||| |||| Sbjct 22221662 CAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGACCATC 22221721 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| |||||||| || ||||||| | ||||||||| | || | ||||| ||||| Sbjct 22221722 CTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 22221781 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||||| | || | || | || || || | || || || Sbjct 22221782 TTGGATCTTGGCTTTGACGTTGTCAATAGTGTCGGAGCTTTCAACCTCCAAAGTGATAGT 22221841 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||| | ||||| || ||||| ||||| Sbjct 22221842 CTTTCCCGTCAAAGTCTTAACGAAGATTTGCAT 22221874 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||| ||||| || ||||||||||||||| || || | | | | | |||| Sbjct 22221434 CAAGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCAGCCAAGGTCCTGCCATC 22221493 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| |||||| || |||||||| || | |||||||| | || | ||||||||||| Sbjct 22221494 TTCCAATTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTC 22221553 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| ||| ||| | || | || ||| || || | || || || Sbjct 22221554 CTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGT 22221613 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || | ||||| || ||||| |||||| Sbjct 22221614 CTTTCCTGTCAAAGTCTTGACGAAGATTTGCATG 22221647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325533036384131