Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 140 2e-28 seq9 134 1e-26 seq3 125 6e-24 seq10 118 8e-22 seq6 116 3e-21 seq7 114 1e-20 seq8 102 6e-17 seq5 102 6e-17 >seq1 Length=28635137 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| |||||||| || || || || ||||| ||||| || Sbjct 22221648 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCTGCC 22221707 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || || || || |||||| | ||||| || ||||| || || || Sbjct 22221708 AAGGTGCGACCATCCTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 22221767 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || |||||| | || | |||||| || ||| || Sbjct 22221768 ATACCCTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAATAGTGTCGGAGCTTTCAACC 22221827 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| ||||| || || || || || ||||| || || ||||| Sbjct 22221828 TCCAAAGTGATAGTCTTTCCCGTCAAAGTCTTAACGAAGATTTGCAT 22221874 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| |||||||| || || || |||||||| ||||| || Sbjct 22221420 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCAGCC 22221479 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || | ||| || ||||| | || | || ||||| || || ||| Sbjct 22221480 AAGGTCCTGCCATCTTCCAATTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCGGGAGGA 22221539 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | ||| ||| || | || | ||||| ||| || || Sbjct 22221540 ATACCCTCCTTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 22221599 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || || || || || || ||||| Sbjct 22221600 TCTAGCGTGATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 22221646 >seq9 Length=37155481 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| || || || || || || ||||||||||| || || Sbjct 16960701 CCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCC 16960760 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| ||||| || ||||| ||| | ||||| || ||||||||||| ||| Sbjct 16960761 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCCGGAGGA 16960820 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || ||||| | || | ||| || ||| || || Sbjct 16960821 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATAGTATCTGAACTCTCCACC 16960880 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| ||||| || || ||||| || ||||| || || ||||| Sbjct 16960881 TCCAAAGTAATAGTCTTTCCGGTTAATGTCTTAACGAAGATTTGCAT 16960927 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| ||||| || || ||||| || ||||| || || || | ||||||| Sbjct 16960256 ACGTAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGCTAGGGTGCGACC 16960315 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || ||||| ||| | ||||| | ||||| ||||| ||||| || ||||| Sbjct 16960316 ATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCTTT 16960375 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||| || | || | ||||| ||| || || || ||||| || Sbjct 16960376 GTCTTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTAAT 16960435 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | || || ||||| |||||||| Sbjct 16960436 GGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960471 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| || || || || || || ||||||||||| || || Sbjct 16960473 CCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCC 16960532 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| ||||| || ||||| ||| | ||||| | ||||| ||||| ||| Sbjct 16960533 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGA 16960592 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| ||| || | || | ||||| ||| || || Sbjct 16960593 ATGCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 16960652 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || | || || ||||| |||||||| Sbjct 16960653 TCTAGAGTAATGGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960699 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||||| ||| || |||| ||||| || || || || || ||||| |||||||| Sbjct 24150851 TCCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 24150910 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || || || || || || || | |||| | ||||| |||||||| Sbjct 24150911 GAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 24150970 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||| || ||||| || ||| || | || ||| | || | ||||| || ||| | Sbjct 24150971 GATACCTTCCTTGTCCTG-AATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGA 24151029 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || | ||||| || || || |||| |||||| ||||| ||||||||||| Sbjct 24151030 CCTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 24151081 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| | |||||||||||| || || || || |||||||| || || || Sbjct 16984244 CCACCACGCAGACGTAACACCAAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 16984303 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| ||||| || ||||| ||| | ||||| || ||||| || || ||| Sbjct 16984304 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGA 16984363 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || || || | || | ||||| ||| || || Sbjct 16984364 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCAATGGTGTCGGAACTCTCCACC 16984423 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || | || || ||||| |||||||| Sbjct 16984424 TCTAGAGTAATGGTCTTACCGGTAAGAGTCTTGACAAAGATCTGCAT 16984470 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||| || || || | || || ||| ||||| ||||| ||||| | | Sbjct 26352610 CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGA 26352551 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 |||||| ||||||||||| || ||||| ||||||||||| | || |||||| | | Sbjct 26352550 TCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 26352491 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 | | ||||| || || || || || || || || || || || | |||||| || | Sbjct 26352490 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCACGA 26352431 Query 29777 ATATCTGCATTTT 29789 | |||||||| || Sbjct 26352430 AGATCTGCATCTT 26352418 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || || || ||||||||||| || || || | ||| || ||| || || || || || Sbjct 16960959 GTTGACTCCTTTTGAATGTTGTAGTCAGCGAGGGTACGCCCATCTTCAAGCTGCTTACCG 16961018 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | |||||||||||||||||| | |||||||| ||||| || || ||| || | ||| Sbjct 16961019 GCAAAGATCAATCTTTGCTGATCCTGAGGAATACCTTCTTTATCCTG-AATCTTGGCTTT 16961077 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 || | || | || ||||| || || || | ||| || || || || || | || Sbjct 16961078 AACGTTGTCGATGGTATCAGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCTGTCAGTGT 16961137 Query 29769 TTTAACAAATATCTGCAT 29786 ||||| || |||||||| Sbjct 16961138 CTTAACGAAGATCTGCAT 16961155 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||||| ||||| || || || || || || || || || ||||| || Sbjct 16984472 CCTCCACGCAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCG 16984531 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || ||||| || || |||||| | ||||| | ||||| || || ||| Sbjct 16984532 AGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGA 16984591 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| |||||||| | || ||| || | || | ||||| || || || Sbjct 16984592 ATACCCTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCACC 16984651 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || | || |||||||| |||||||| Sbjct 16984652 TCGAGCGTGATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || || || || ||||| || || || | || || ||| Sbjct 16984715 AGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCATCC 16984774 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 |||||||| || || || | || | |||||||||||||| || || ||||| ||||| Sbjct 16984775 TCGAGTTGCTTCCCGGCGAAGATAAGCCTTTGCTGATCCGGTGGGATTCCCTCCTTGTCC 16984834 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||||| | || | ||||| || ||| || ||||| || || || Sbjct 16984835 TG-AATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGT 16984893 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || ||||| || |||||||| Sbjct 16984894 CTTTCCTGTGAGAGTCTTAACGAAGATCTGCAT 16984926 >seq3 Length=31725688 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| ||||| || |||||||| || |||||||| || || | || ||| ||| Sbjct 13311411 AGCACCAGGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGACCATCC 13311352 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || ||||||||||| | |||| || ||||| || || ||||||||||||||||| Sbjct 13311351 TCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCC 13311292 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||| || | || | ||||| ||| || || || || || || || Sbjct 13311291 TGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTC 13311232 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || || |||||||| Sbjct 13311231 TTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 13311200 >seq10 Length=17599535 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||| | ||||| || || || || ||||| ||||||||||||| || ||| Sbjct 17168580 ACGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTATAATCCGCAAGCGTACGACC 17168521 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| ||||| | || | ||| ||||| || || || || || || || Sbjct 17168520 ATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATGCCTTCCTT 17168461 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| |||||| | || | |||||||| || || || | || | Sbjct 17168460 GTCCTG-AATCTTTGCTTTGACGTTGTCAATCGTGTCAGAGCTCTCAACCTCCAAGGTAA 17168402 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || || ||||| || ||||| |||||||| Sbjct 17168401 TTGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 17168365 >seq6 Length=26286742 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || || || || || || ||||| || ||||| | || ||| ||| Sbjct 15796711 AGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCC 15796652 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || ||||||||||| | |||| || ||||| || || ||||||||||||||||| Sbjct 15796651 TCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCC 15796592 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||| || | || | ||||| ||| || || || || || || || Sbjct 15796591 TGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTC 15796532 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || || |||||||| Sbjct 15796531 TTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 15796500 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||||||||| || || || ||||| || || || | ||||||| Sbjct 15797855 ACGGAGGACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGACC 15797796 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | || | | ||||| ||||| || || || || || Sbjct 15797795 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTT 15797736 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || || || | || | |||||| || || || ||||| || || Sbjct 15797735 GTCTTGGATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACCTCAAGCGTGAT 15797676 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||||| || |||||||| Sbjct 15797675 CGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 15797640 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || || || || || || ||||| || ||||| | || ||| ||| Sbjct 15797623 AGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCC 15797564 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || ||||||||||| | || | | ||||| || || || || || || |||||| Sbjct 15797563 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 15797504 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || || || | || | |||||| ||| || || || | || || || Sbjct 15797503 TGGATCTTGGCCTTCACTTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTC 15797444 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | ||| || |||||||||||||| Sbjct 15797443 TTGCCGGTAAGGGTCTTCACAAATATCTGCAT 15797412 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || || || || ||||| || ||||| | || ||| ||| Sbjct 15796939 AGGACGAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCC 15796880 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || ||||||||||| | || | | ||||| || || || || || || |||||| Sbjct 15796879 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 15796820 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || || || | || | |||||| || || || ||||| || || || Sbjct 15796819 TGGATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACCTCAAGCGTGATCGTC 15796760 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || |||||||| Sbjct 15796759 TTGCCGGTCAATGTCTTAACGAAAATCTGCAT 15796728 >seq7 Length=22597724 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| || |||||||| |||||||| || || || || ||||| || ||||| Sbjct 8143598 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 8143657 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || || || || || || || | |||| | ||||| ||||| || Sbjct 8143658 GAGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 8143717 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||| || ||||| || ||| || | || ||| | || | ||||| || ||| | Sbjct 8143718 GATACCTTCCTTGTCCTG-AATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGA 8143776 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || ||||| || || || |||| |||||| ||||| ||||||||||| Sbjct 8143777 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 8143828 Score = 100 bits (110), Expect = 2e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | | || ||||| |||||||| || ||||| || ||||| || |||||| Sbjct 5292546 CCACCCCTAAGCCTCAAGACCAAGTGAAGCGTTGACTCTTTCTGGATGTTGTAGTCCGCA 5292487 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || ||||| || ||||| |||||| || || ||||||||||| Sbjct 5292486 AGGGTTCTACCATCTTCTAGTTGCTTCCCAGCGAATATCAGCCTCTGTTGATCCGGCGGT 5292427 Query 29680 ATACCCTCTTTGTCTTGT 29697 || || |||||||| ||| Sbjct 5292426 ATTCCTTCTTTGTCCTGT 5292409 >seq8 Length=21613650 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||| ||||| || || || ||||||||||| || || |||| ||||||| Sbjct 12585463 ACGCAACACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACC 12585404 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | | ||||| || || || || | || || Sbjct 12585403 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGTCTTCCTT 12585344 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||||| | || | ||||| || || || || || || || Sbjct 12585343 GTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGAT 12585284 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||| | || ||||| |||||||| Sbjct 12585283 GGTCTTTCCGGTTAAGTTCTTGACAAAGATCTGCAT 12585248 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | | ||| ||||| ||||| ||||| ||||| |||||||| || || || Sbjct 8932583 CCACCCCTAAGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCT 8932524 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || |||||||| |||||| | || | || || ||||| || || Sbjct 8932523 AGCGTTCGACCATCCTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCAGGTGGT 8932464 Query 29680 ATACCCTCTTTGTCTTGT 29697 || ||||||||||| ||| Sbjct 8932463 ATCCCCTCTTTGTCCTGT 8932446 >seq5 Length=23960834 Score = 102 bits (112), Expect = 6e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | ||| || || || || || || ||||| ||||| || | ||| | || Sbjct 16975059 AGGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCTCCCGTCC 16975000 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || || || || | || | || ||||||||||| ||||| ||||| |||||| Sbjct 16974999 TCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCT 16974940 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||| ||| | || | |||||||| ||| || ||||| || || || Sbjct 16974939 TG-AATCTTGGCTTTAACATTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGT 16974881 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || | ||| || ||||| Sbjct 16974880 CTTTCCCGTTAAGGTCTTGAAAAAGATATGCAT 16974848 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | ||| || || || || || || |||| ||||| || | ||| | || Sbjct 16974831 AGGACGAGATGTAGAGTCGACTCCTTCTGGGTGTTGTAATCGGCTAGGGTTCTCCCCTCC 16974772 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || || || || || | || ||||||||||| ||||||||||| |||||| Sbjct 16974771 TCGAGCTGCTTTCCGGCGAGGATGAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCT 16974712 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||| ||| | || | |||||||| ||| || ||||| || || || Sbjct 16974711 TG-AATCTTGGCTTTAACATTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGT 16974653 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || ||||| || |||||||| Sbjct 16974652 CTTTCCCGTGAGTGTCTTAACGAAGATCTGCAT 16974620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385030236620109