Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq24705 567 9e-157 seq40249 563 1e-155 seq27683 221 1e-52 seq13684 158 1e-33 seq34986 127 2e-24 seq3029 125 9e-24 seq9 118 1e-21 seq1 118 1e-21 seq10 114 2e-20 >seq24705 Length=1162 Score = 567 bits (628), Expect = 9e-157 Identities = 717/975 (74%), Gaps = 8/975 (1%) Strand=Plus/Plus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 |||||| | ||| ||||| || | || || || || |||| |||||||| || || Sbjct 191 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 250 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || || | ||| | |||||| |||| || || |||||||| ||||||| || Sbjct 251 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 309 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || || || || || ||||| || || ||||||| | | ||||| ||||| Sbjct 310 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 369 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 || ||||||||||| || | || |||| || || || | ||||| || || || Sbjct 370 TATTATCTCTGGTGCTATTATCCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 429 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 |||||||| ||||| ||||||||||| | || || |||||||||| | || | || Sbjct 430 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 489 Query 177857 CTTTCACTTCCTTA-TCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACC 177915 | |||| ||||| | || | | |||||||| ||||||||||||||| | || Sbjct 490 TCTACACT-CCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 548 Query 177916 GTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCG 177975 |||| |||||||| || ||||| ||||||||| || || ||||||||||| || | | Sbjct 549 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 608 Query 177976 CAGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGT 178034 | || ||||| | | || ||| | |||||||| || || |||| ||||||| | || Sbjct 609 CTGT-TTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGA 667 Query 178035 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCAC 178094 |||||||||||||| |||| ||| |||||||||| || || ||||| || ||||||||| Sbjct 668 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 727 Query 178095 CCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCAT 178154 || || |||||| | ||||| ||||| |||||||| || || || || |||||||||| Sbjct 728 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 787 Query 178155 GGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTAT 178214 || | | || ||||| | | | ||| | || || || |||| ||| || || | Sbjct 788 GGTTCTTTGGTAACTTC-TAGTTTGTCAGGGAAACTACTGAAAATGAATCTGCTAATGAG 846 Query 178215 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTC 178274 |||||||| || || ||||| |||||||| ||||| || || || || |||||||| || Sbjct 847 GGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTT 906 Query 178275 GGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTC 178334 || || || |||||||||||||| ||||||||||| ||||| | ||||||||| | Sbjct 907 GGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 966 Query 178335 GCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTT 178394 || || ||||||||||| |||||||||||||| || | ||| | || ||||| || Sbjct 967 GCTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 1026 Query 178395 AACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAAC 178454 ||||| ||||| ||||| |||||||| || | | || | ||||| || || | || Sbjct 1027 AACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 1086 Query 178455 ACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAAT 178514 || ||||| || | |||||||||| || || |||||||| ||||||||| | ||| Sbjct 1087 ACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAAT 1146 Query 178515 AGCACATAACTTCCC 178529 || || |||||||| Sbjct 1147 -GCTCACAACTTCCC 1160 >seq40249 Length=153482 Score = 563 bits (624), Expect = 1e-155 Identities = 729/1004 (73%), Gaps = 2/1004 (0%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| ||||| || ||||| ||||||||||| || | || Sbjct 31945 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 32004 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 32005 TTCCTTGTGCCTATTTCGCTTTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 32064 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128 |||| || ||||| | |||||||||||| | |||||| || ||| | || || || | Sbjct 32065 GGTATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 32124 Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188 | || || |||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 32125 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 32184 Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248 | || |||| || ||||| ||| | || || || ||| ||| || |||||||||| Sbjct 32185 AAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTGTTGCTCTCCACG 32244 Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307 |||| ||||| |||| || || ||| | ||||| |||||||| || || ||| || | Sbjct 32245 GTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 32304 Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367 | || ||||| ||||| || || || ||||||| ||||| || || ||| ||| ||| Sbjct 32305 -TGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTT 32363 Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCG 179427 || || || ||||| || ||||| |||||||||||||||| |||||||| ||||| Sbjct 32364 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 32423 Query 179428 ATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCAC 179487 || ||| ||||| | || || || ||||| || || || |||||| | ||||| ||||| Sbjct 32424 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 32483 Query 179488 ATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACT 179547 ||||||||||| || ||| | ||||| | |||||| | | ||||||||||| | ||| Sbjct 32484 ATGATGGGAGTCGCTGGTGTACTGGGCGCGGCTCTGTTATGCGCTATTCATGGTGCTACT 32543 Query 179548 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCT 179607 ||||| ||||| || | ||||||||| || ||||| ||||| || || || | Sbjct 32544 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 32603 Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667 || |||| || || || ||||| ||||| || || ||||| |||||||| || ||||| Sbjct 32604 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 32663 Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727 |||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || | Sbjct 32664 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACT 32723 Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787 ||| | ||| | | || |||| | | || |||||| | || || ||||| ||||| Sbjct 32724 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 32783 Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847 || || || || ||| | ||||| |||||||| || || ||||| |||||||| || Sbjct 32784 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAA 32843 Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907 || |||||| | || ||||| | || |||||| |||| || ||||| || |||||| Sbjct 32844 AATATTCTTTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 32903 Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||| | || ||||| || || || ||||| |||| ||||| || Sbjct 32904 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 32947 Score = 549 bits (608), Expect = 2e-151 Identities = 721/995 (72%), Gaps = 3/995 (0%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 ||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 1342 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1283 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCGTCGCTGCTCCC 177677 ||||| || || | ||| | |||||| | || || |||| ||| | |||||||| Sbjct 1282 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 1223 Query 177678 CCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAAC 177737 || || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 1222 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 1163 Query 177738 ATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATC 177797 || || || ||||| || | || |||| || |||||| | || || || || ||| Sbjct 1162 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 1103 Query 177798 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTC 177857 |||||||| ||||| ||||||| ||||| || ||||||||||||| |||| | || Sbjct 1102 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 1043 Query 177858 TTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGT 177917 | ||||| | | || | | |||||||| ||||||||||||||| | |||| Sbjct 1042 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 983 Query 177918 CTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCA 177977 || |||||||| || ||||| ||||||||| || || ||||||||||| || | || Sbjct 982 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 923 Query 177978 GTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTAT 178036 || ||||| | |||| || | |||||||| || || |||| ||||||||| || || Sbjct 922 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 864 Query 178037 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCC 178096 |||||||||||| |||| ||| |||||||||| || || ||||| || ||||||||||| Sbjct 863 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 804 Query 178097 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156 || |||||| | ||||| ||||| |||||||| || || || || |||||||||||| Sbjct 803 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 744 Query 178157 AAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGG 178216 | | || |||||| | || | || || ||||||| ||| || || | || Sbjct 743 TTCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 684 Query 178217 TTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGG 178276 ||||| ||||| |||||||||||||| || ||||| || || || || ||||| || || Sbjct 683 TTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 624 Query 178277 TCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGC 178336 || ||||||||||||||||| |||||||| || ||||| | || |||||| | || Sbjct 623 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 564 Query 178337 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAA 178396 || ||||| ||||| || || ||||| || || | ||| | || ||||| || || Sbjct 563 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 504 Query 178397 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178456 ||| ||||| ||||| |||||||| || | | || | ||||||||||| | || || Sbjct 503 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 444 Query 178457 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAG 178516 ||||| || | | |||||||| || || |||||||| ||||| ||| | ||| | Sbjct 443 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT-G 385 Query 178517 CACATAACTTCCCGCTTGATCTTGCAGCAGCTGAG 178551 | || |||||||| || || || || || | |||| Sbjct 384 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 350 >seq27683 Length=354 Score = 221 bits (244), Expect = 1e-52 Identities = 260/352 (74%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 179336 CTGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTT 179395 ||||||| ||||| || || ||| |||||| || || || ||||| || ||||| ||| Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 179396 GGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAG 179455 ||||||||||||| ||||| || || ||||| ||| ||||| | |||||||| |||| Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAG 235 Query 179456 GTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTG 179515 | || || || ||||| | ||||| ||||| |||||||||||||| || | | |||| Sbjct 234 GATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGTG 175 Query 179516 GTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAG 179575 |||||||| | ||||||||||||| || ||||| || || | | ||| || || | Sbjct 174 CGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGTG 115 Query 179576 AACAAGCAAACACATTTAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGG 179635 | ||||| || || || || || | || |||| || || || ||||| |||| Sbjct 114 ATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGG 55 Query 179636 TTACAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAA 179687 | || || ||||| |||||||| || ||||| || ||| | ||| |||||| Sbjct 54 TCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAA 3 >seq13684 Length=3594 Score = 158 bits (174), Expect = 1e-33 Identities = 192/262 (73%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 179690 GTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTG 179749 ||||||| || ||||||| ||| ||||| || |||| ||| | ||| | | |||||| Sbjct 1 GTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTG 60 Query 179750 GCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAG 179809 || | |||| | ||||| || | ||||| ||||| ||||| || || ||| | | Sbjct 61 GCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTG 120 Query 179810 CAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGAC 179869 |||| ||||||||||| || ||||| ||||| || || || |||||| | || || || Sbjct 121 CAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTA 180 Query 179870 TACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAG 179929 | ||||| ||| ||||| || ||||| || |||||||| | || ||||| || || | Sbjct 181 TTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGG 240 Query 179930 TCCTACCTAGTGGTAACGCACT 179951 | ||||| |||| ||||| || Sbjct 241 TTCTACCACGTGGAAACGCTCT 262 >seq34986 Length=93546 Score = 127 bits (140), Expect = 2e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 ||| ||||||| |||||||| ||||| || || || | || ||||| || ||||||||| Sbjct 33506 TACGTCCTTGACGCTGCTGAGGAAGCCGGAATCGACTTGCCTTACTCTTGCCGTGCTGGT 33565 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 | || || | |||||| |||||| | || ||| |||| || |||||||||||| | Sbjct 33566 TCCTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGATCTGTTGACCAGTCTGACCAGAGT 33625 Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717 ||||| ||||||||||| ||||| | |||||| | | ||||| | || || | || Sbjct 33626 TTCCTCGATGATGACCAGATTGCGGAAGGATTCGTTCTCACTTGTGCGGCTTATCTTACT 33685 Query 138718 TCCGATTGTATAATTGAAAC 138737 | |||| || ||||| || Sbjct 33686 TTCGATGTTACCATTGAGAC 33705 >seq3029 Length=7874 Score = 125 bits (138), Expect = 9e-24 Identities = 171/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || ||||| || |||||||| || | || Sbjct 249 TGGATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCT 190 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||||||| | || | || |||||| |||| |||||| ||||||| || || Sbjct 189 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 130 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTT-ACGGCAGCT 179127 |||| |||||||| | |||||||||||| | |||||| ||| |||||| || ||||| Sbjct 129 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCA 71 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGA 179183 || || || ||||| || | | | || ||| | | ||||| ||||| || || Sbjct 70 GTTTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCCGA 15 >seq9 Length=37155481 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 ||| |||| || ||||| || |||||||| || || | || ||||| || ||||| ||| Sbjct 8544654 TACGTCCTCGACGCTGCGGAGGAAGCAGGGATCGACTTGCCTTACTCTTGCCGTGCCGGT 8544595 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 | || || | |||||| |||||| | || || ||| || |||||||||||| | Sbjct 8544594 TCTTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTTTGTTGACCAGTCTGACCAGAGT 8544535 Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717 ||||| ||||||||||| ||||| ||||| ||| | | ||||| | || || || || Sbjct 8544534 TTCCTCGATGATGACCAGATTGCTGCAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 8544475 Query 138718 TCCGATTGTATAATTGAAAC 138737 || ||| || ||||| || Sbjct 8544474 TCTGATGTTACCATTGAGAC 8544455 >seq1 Length=28635137 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 ||| |||| || ||||| || ||||| || || || | || ||||| || ||||||||| Sbjct 17178800 TACGTCCTCGACGCTGCGGAGGAAGCCGGGATCGACTTGCCTTACTCTTGCCGTGCTGGT 17178859 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 | || || | |||||| || ||| | || ||| ||| || |||||||||||| | Sbjct 17178860 TCGTGCTCAAGCTGTGCCGGCAAAGTTGTGTCTGGATTTGTTGACCAGTCTGACCAGAGT 17178919 Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717 ||||| ||||||||||| ||||| ||||| ||| | | ||||| | || || || || Sbjct 17178920 TTCCTCGATGATGACCAGATTGCTGCAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACC 17178979 Query 138718 TCCGATTGTATAATTGAAAC 138737 || ||| || ||||| || Sbjct 17178980 TCTGATGTTACCATTGAGAC 17178999 >seq10 Length=17599535 Score = 114 bits (126), Expect = 2e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 178035 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCAC 178094 |||||||||||||| |||| ||| ||||||||| || || ||||| || ||||||||| Sbjct 16803128 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCAC 16803187 Query 178095 CCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCAT 178154 || || ||||| | ||||| | ||| |||||| |||| || | || || |||| || Sbjct 16803188 CCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTAT 16803247 Query 178155 GGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTAT 178214 || | | || |||||| | | | | || ||| ||| ||| || ||| | Sbjct 16803248 GGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACGAA 16803307 Query 178215 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGT 178255 |||| | ||||| |||||||||||||| || ||||| || Sbjct 16803308 AGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGT 16803348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605362481260840