Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq10 174 3e-38 seq8 152 1e-31 seq9 141 2e-28 seq6 134 3e-26 seq7 132 9e-26 seq5 132 9e-26 seq3 125 1e-23 seq1 125 1e-23 >seq10 Length=17599535 Score = 174 bits (192), Expect = 3e-38 Identities = 171/218 (78%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || | ||| ||||| || || ||||| || || ||||||| | | | ||||| Sbjct 17168808 ACGCAACACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTACC 17168749 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||| ||||| ||||| ||||| || ||||| || |||||||| Sbjct 17168748 ATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGAATCCCTTCCTT 17168689 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || |||||||| || || || || || ||||| || | || | || |||||||| |||| Sbjct 17168688 GTCCTGAATCTTAGCCTTCACGTTGTCTATCGTGTC-TGAGCTCTCAACTTCCAAGGTTA 17168630 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | |||||||||||||| ||||| |||||||| |||||| Sbjct 17168629 TAGTCTTGCCTGTCAAAGTCTTCACAAATATTTGCATT 17168592 Score = 159 bits (176), Expect = 7e-34 Identities = 167/217 (77%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || | ||| || ||||| || ||||| ||||||||||| | || | | ||| Sbjct 17168580 ACGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTATAATCCGCAAGCGTACGACC 17168521 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||| ||||| ||||| || || ||||| || || |||||||| Sbjct 17168520 ATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATGCCTTCCTT 17168461 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || |||||||||||||| || || |||||||| ||| || | || || ||||| || | Sbjct 17168460 GTCCTGAATCTTTGCTTTGACGTTGTCAATCGTGTCA-GAGCTCTCAACCTCCAAGGTAA 17168402 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || ||||| ||||| ||||| |||||||| Sbjct 17168401 TTGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 17168365 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || || || || || || || ||||||||||| || | | | || || ||||| Sbjct 7692288 GTGAAGTGTTGACTCCTTTTGGATGTTATAATCAGAAAGCCTGTAATCATCCTCCAGTTG 7692229 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 | | |||||||| || ||||| || || ||||| | || |||||||| ||||||||| | Sbjct 7692228 TCTACCAGCAAATATCAGTCTCTGGTGGTCTGGTGCGATCCCTTCCTTGTCTTGAATCAT 7692169 Query 82727 TGCTTTTACATTTTCAATCGTATC 82750 || |||| ||| | ||| || || Sbjct 7692168 TGTCTTTAAATTGTAAATGGTGTC 7692145 >seq8 Length=21613650 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | || ||||| || ||||| |||||||| || ||||| || || || |||| Sbjct 12585248 TACCTCCACGCAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAG 12585189 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||| || || || || || ||||| | || || || || |||| Sbjct 12585188 CCAGAGTTCTACCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 12585129 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||| ||||| ||||| || || || || || || | || | Sbjct 12585128 GGATCCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTGTCGATTGTGTCGGAACTCTCGA 12585069 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || |||||||| || ||||| ||||| || || |||||||| Sbjct 12585068 CCTCAAGGGTGATCGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 12585020 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | ||||| || ||||| ||| ||| || ||||| || || || |||| Sbjct 12585020 TACCTCCACGAAGACGCAACACCAAGTGGAGATTAGTCTCCTTCTGGATGTTGTAGTCAG 12584961 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||| || || ||||| || ||||| | || || ||||| || | Sbjct 12584960 CGAGAGTTCTACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGG 12584901 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| ||||| || || || || || || ||| | Sbjct 12584900 GAATGCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCCA 12584841 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || |||||||| || || | ||||| || || |||||||| Sbjct 12584840 CCTCGAGGGTGATCGTCTTCCCGGTGAGAGTCTTAACGAAGATCTGCAT 12584792 Score = 105 bits (116), Expect = 1e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 |||||| ||||| ||||| || |||||||| || || || |||| ||| ||| ||| || Sbjct 8932569 CAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTTCGACCATC 8932510 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || |||||||| ||||||||||| || || |||||||| || ||||| || || || || Sbjct 8932509 CTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCAGGTGGTATCCCCTCTTTGTC 8932450 Query 82718 TTG 82720 || Sbjct 8932449 CTG 8932447 >seq9 Length=37155481 Score = 141 bits (156), Expect = 2e-28 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | || ||||| || ||||| |||||||| || ||||| ||||| ||||||| Sbjct 16984470 TACCTCCACGCAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAG 16984529 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || |||| ||||| || || || || ||||||||||| | | || || || |||| Sbjct 16984530 CGAGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAG 16984589 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || || ||||| ||||| ||||| ||||| || || || || || || || | || Sbjct 16984590 GAATACCCTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCGATGGTGTC-GGAGCTCTCC 16984648 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || |||||||| || || | ||||| ||||| |||||||| Sbjct 16984649 ACCTCGAGCGTGATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| |||| ||| ||||| | ||| ||||| || || ||||| || || ||||| | Sbjct 24150852 CCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCG 24150911 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || |||||||| || || || || || ||||| || | || || || || || Sbjct 24150912 AGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 24150971 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || |||||||| || || ||||| || ||||| || | ||| || Sbjct 24150972 ATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGACC 24151031 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || ||||||||||| || || | || || ||||| ||||||||| Sbjct 24151032 TCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATT 24151079 Score = 105 bits (116), Expect = 1e-17 Identities = 144/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670 ||| |||| ||||||| || || || |||| ||| | | || ||||| || |||||| Sbjct 26352619 AGATTAGAC-CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTT 26352561 Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 ||||| ||||| | || || ||||| ||||| || ||||| || ||||| ||||| || Sbjct 26352560 CCAGCGAAGATCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCC 26352501 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| || || || || | || || || | || || ||||| || |||| Sbjct 26352500 TTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGG 26352441 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || || || |||||||| Sbjct 26352440 GTTTTCACGAAGATCTGCAT 26352421 >seq6 Length=26286742 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| |||||||| || ||||| || || || || | | | | | ||| || Sbjct 15797623 AGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCC 15797564 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| ||||| ||||| || | || || |||||||| || |||||||| ||| Sbjct 15797563 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 15797504 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| || || || || ||||| || || | || || ||||| || || ||| Sbjct 15797503 TGGATCTTGGCCTTCACTTTATCAATAGTGTCCGAACTCTCAACCTCCAATGTGATGGTC 15797444 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || | ||||| |||||||||||||| Sbjct 15797443 TTGCCGGTAAGGGTCTTCACAAATATCTGCAT 15797412 Score = 122 bits (134), Expect = 2e-22 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || |||||||| || ||||| || || || || | | | | | ||| || || || ||| Sbjct 15796930 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCAAGCTGT 15796871 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||| ||||| || | || || |||||||| || |||||||| ||||| ||||| Sbjct 15796870 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTG 15796811 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || ||||| || || || | || || || | || ||||||||||| || Sbjct 15796810 GCCTTCACGTTGTCAATAGTGTCGG-AGCTCTCCACCTCAAGCGTGATCGTCTTGCCGGT 15796752 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| || || |||||||| Sbjct 15796751 CAATGTCTTAACGAAAATCTGCAT 15796728 Score = 118 bits (130), Expect = 2e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||| || || || || ||||| || || || || | || | | ||| Sbjct 15797855 ACGGAGGACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGACC 15797796 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || |||||||| ||||| || | || || || ||||| || |||||||| Sbjct 15797795 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTT 15797736 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||| ||||| || || || || ||||| || || || | || || || | || | Sbjct 15797735 GTCTTGGATCTTGGCCTTCACGTTGTCAATAGTGTCGG-AGCTCTCCACCTCAAGCGTGA 15797677 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| ||||| ||||| || || |||||||| Sbjct 15797676 TCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 15797640 >seq7 Length=22597724 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||| || || || ||||| || || || || ||||| || || || || | Sbjct 8143599 CCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 8143658 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || |||||||| || || || || || ||||| || | || || || ||||| Sbjct 8143659 AGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGG 8143718 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || |||||||| || || ||||| || ||||| || | ||| || Sbjct 8143719 ATACCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGACC 8143778 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || | ||||||||||| || || | || || ||||| ||||||||| || Sbjct 8143779 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTTT 8143829 Score = 93.3 bits (102), Expect = 8e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||| || || || |||||||| || || || || | || ||||||| |||||| Sbjct 5292528 ACCAAGTGAAGCGTTGACTCTTTCTGGATGTTGTAGTCCGCAAGGGTTCTACCATCTTCT 5292469 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTG 82720 ||||| || ||||| || || || || |||||||| || ||||||||||| || || || Sbjct 5292468 AGTTGCTTCCCAGCGAATATCAGCCTCTGTTGATCCGGCGGTATTCCTTCTTTGTCCTG 5292410 >seq5 Length=23960834 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || ||||| || || ||||| | ||| |||| ||||| || || || Sbjct 16975050 TGTAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCTCCCGTCCTCGAGCTGC 16974991 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || ||||| || || || ||||| ||||| || || ||||| ||||||||||| Sbjct 16974990 TTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCTTGAATCTTG 16974931 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||| || || || ||| ||| || || | || |||||||| || || Sbjct 16974930 GCTTTAACATTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCCGTT 16974871 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || ||||| | ||| || ||||| Sbjct 16974870 AAGGTCTTGAAAAAGATATGCAT 16974848 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || ||||| | || ||||| | ||| |||| || || || || || Sbjct 16974822 TGTAGAGTCGACTCCTTCTGGGTGTTGTAATCGGCTAGGGTTCTCCCCTCCTCGAGCTGC 16974763 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || | ||| || || || ||||| ||||| || || ||||| ||||||||||| Sbjct 16974762 TTTCCGGCGAGGATGAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTTG 16974703 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||| || || || ||| ||| || || | || |||||||| || || Sbjct 16974702 GCTTTAACATTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCCGTG 16974643 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 16974642 AGTGTCTTAACGAAGATCTGCAT 16974620 >seq3 Length=31725688 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || | ||| ||||| ||||||||||| || ||||| |||| | | | | ||| || Sbjct 13311411 AGCACCAGGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGACCATCC 13311352 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| ||||| ||||| || || || || |||||||| || || || || || Sbjct 13311351 TCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCC 13311292 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || ||||| || || ||||| || || | || || || | || |||||| Sbjct 13311291 TGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTC 13311232 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || ||||| || || |||||||| Sbjct 13311231 TTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 13311200 >seq1 Length=28635137 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||||| || ||||| || ||||| || ||||| || || ||||| | Sbjct 22221648 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCTGCC 22221707 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||| || || || || |||||||||||||| | || || || ||||| || Sbjct 22221708 AAGGTGCGACCATCCTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 22221767 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || ||||| ||||| ||||| || || ||||| || || ||| || Sbjct 22221768 ATACCCTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAATAGTGTCGGAGCTTTCAACC 22221827 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 22221828 TCCAAAGTGATAGTCTTTCCCGTCAAAGTCTTAACGAAGATTTGCAT 22221874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981320881224411