Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq9 129 4e-25 seq7 116 2e-21 seq5 107 1e-18 seq6 95.1 8e-15 seq3 95.1 8e-15 seq3787 89.7 3e-13 seq8 87.8 1e-12 seq4 84.2 1e-11 >seq9 Length=37155481 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | |||| || ||||| ||| || || ||||||||||| | | Sbjct 24150852 CCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCG 24150911 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | |||| |||| || || ||||| || |||| ||||||||| || |||| Sbjct 24150912 AGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 24150971 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| ||| || ||| |||| ||| | |||||| |||||| || Sbjct 24150972 ATACCTTCCTTGTCCTGAATCTTGGCCTTC-ACATTGTCGATCGTGTCGGATGATTCGAC 24151030 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || ||||| || || |||| ||||| |||||||||||||| Sbjct 24151031 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 24151078 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||||| |||||| || || || |||||| || |||||||| || | Sbjct 16960244 ACCACCACGGAGACGTAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCAGC 16960303 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || |||||||| |||||||||||||| || | || Sbjct 16960304 TAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGG 16960363 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| |||| || | ||| | ||||||| |||| Sbjct 16960364 AATGCCTTCTTTGTCTTGGATTTTGGCTTTC-ACGTTGTCAATGGTGTCGGAACTCTCCA 16960422 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || | || || ||||||||||||||| Sbjct 16960423 CCTCTAGAGTAATGGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCATA 16960472 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | || ||| || ||||| || ||||| ||| || || || |||||||| | Sbjct 16984471 ACCTCCACGCAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGC 16984530 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | |||| || | || || || ||||| |||||||||||||| || | || Sbjct 16984531 GAGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 16984590 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || || | || ||| | ||| | ||||||| |||| Sbjct 16984591 AATACCCTCCTTGTCTTGGATCTT-AGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCA 16984649 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||||||| || || || | || || ||||||||||||||| Sbjct 16984650 CCTCGAGCGTGATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCATA 16984699 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || ||||||| |||| ||| |||||| |||| |||| || || ||||| || Sbjct 30362436 CTCCTTCTGGGTGTTGTAGTCGGCGAGCGTGCGTCCGTCTTCCAGCTGCTTCCCGGCGAA 30362377 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| |||||||| || | || | ||||| ||||| || || || | ||| Sbjct 30362376 AATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CAT 30362318 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||||| || || || || | ||||| ||||| || || | ||||| | Sbjct 30362317 TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGTAAGGGTTTTCA 30362258 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 30362257 CAAAGATCTGCAT 30362245 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||||||||||||||| ||||| ||| || || |||||||| || | Sbjct 16984244 CCACCACGCAGACGTAACACCAAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 16984303 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || || | || || |||||||| ||||| | |||||| ||| | || Sbjct 16984304 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGA 16984363 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | ||| | ||| | ||||||| ||||| Sbjct 16984364 ATGCCTTCCTTGTCCTGGATCTT-AGCCTTAACGTTGTCAATGGTGTCGGAACTCTCCAC 16984422 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || ||||| || | || || ||||||||||||||| Sbjct 16984423 CTCTAGAGTAATGGTCTTACCGGTAAGAGTCTTGACAAAGATCTGCATA 16984471 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| ||||| |||||||| || | ||| || || | || || | || || |||||||| Sbjct 16960964 CTCCTTTTGAATGTTGTAGTCAGCGAGGGTACGCCCATCTTCAAGCTGCTTACCGGCAAA 16961023 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| | |||||||| || || | ||||||||| || ||| || ||| ||| | Sbjct 16961024 GATCAATCTTTGCTGATCCTGAGGAATACCTTCTTTATCCTGAATCTTGGCTTT-AACGT 16961082 Query 33678 AGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTT 33733 ||| | ||| || ||| ||||| || | |||||||| || ||||| | || | Sbjct 16961083 TGTCGATGGTATCAGAGCTC---TCCACCTCCAAAGTGATCGTCTTCCCTGTCAGTGTCT 16961139 Query 33734 TTACAAAGATCTGCAT 33749 | || ||||||||||| Sbjct 16961140 TAACGAAGATCTGCAT 16961155 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||| || |||||||| || | || || || | || || | |||||||| || || | Sbjct 26352610 CTTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCATCTTCGAGCTGTTTTCCAGCGAAGA 26352551 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||| ||||||||||| | || | |||||||||||| || || | | |||| | Sbjct 26352550 TCAATCGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTT-GGCCTTGACATTG 26352492 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | ||||||| || || || || | ||||| || || || || | ||||| || Sbjct 26352491 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAGGGTTTTCACG 26352432 Query 33739 AAGATCTGCATAGTTGGTG 33757 ||||||||||| ||| || Sbjct 26352431 AAGATCTGCATCTTTGTTG 26352413 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || ||||| || ||||| ||| || || ||||| || || | | || || | Sbjct 16960484 ACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCCAAGGTACGACC 16960543 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || || | || || |||||||| |||||||||||||| || | || | |||||||| Sbjct 16960544 ATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCTTT 16960603 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||||| |||| || | ||| | ||||||| ||||| || | || | Sbjct 16960604 GTCTTGGATTTTGGCTTTC-ACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGTAA 16960662 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || | || || ||||||||||||||| Sbjct 16960663 TGGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCATA 16960700 >seq7 Length=22597724 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| || | |||||| || || || ||| || || |||||||| || | | Sbjct 8143599 CCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 8143658 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | |||| |||| || || ||||| || |||| ||||||||| || | || Sbjct 8143659 AGCGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGG 8143718 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| ||| || |||| ||| ||| | |||||| |||||| || Sbjct 8143719 ATACCTTCCTTGTCCTGAATCTTGGCCTTCA-CATTGTCGATCGTGTCGGATGATTCGAC 8143777 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || ||||| || || |||| ||||| |||||||||||||| Sbjct 8143778 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 8143825 >seq5 Length=23960834 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | || ||||||||| | ||| ||||| ||| || || |||||||| |||| Sbjct 16975302 CCTCCACGCAGACGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGCC 16975243 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| || | || ||||| || || |||||||| |||||||||||||| || |||| Sbjct 16975242 AATGTACGACCATCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGGG 16975183 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACG 33702 | || || ||||| || || || | || | ||||||| ||||| Sbjct 16975182 ATTCCCTCCTTGTCCTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACC 16975123 Query 33703 TCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||||| || || ||||| || || |||||||||||||| Sbjct 16975122 TCGAGTGTGATCGTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCAT 16975076 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||||||||| ||| || || ||||||||||||| || || | |||| || | || Sbjct 16975051 ATGTAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCTCCCGTCCTCGAGCTG 16974992 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 |||||||| || || | | ||||||||| | || | || || ||||| ||| || Sbjct 16974991 CTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCTTGAATCTT 16974932 Query 33666 CTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTAC 33721 | || ||||| ||| | |||||| ||| |||||| |||| |||||||| || | Sbjct 16974931 -GGCTTTAACATTGTCGATGGTGTCAGAGCT---TTCCACCTCAAGGGTGATCGTCTTTC 16974876 Query 33722 CTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || || | |||||| ||||| Sbjct 16974875 CCGTTAAGGTCTTGAAAAAGATATGCAT 16974848 >seq6 Length=26286742 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596 || |||||| || ||||| ||| || || |||||||| || | | || || | || Sbjct 15796712 TAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATC 15796653 Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || | ||||| || || || |||| | |||||| ||| | || | ||| |||||||| Sbjct 15796652 CTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTGTC 15796593 Query 33657 GGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCG 33715 ||||| ||||| | | |||| ||||||| ||||| || | |||||||| Sbjct 15796592 CTGGATTTTGGCTTTCA-CGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCG 15796534 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||||||| || || || ||||||||||| Sbjct 15796533 TCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 15796500 Score = 84.2 bits (92), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || |||| || || || ||| || || || |||||||| | | || | | Sbjct 15796487 ACGCAAGACCAGGTGAAGCGTAGACTCCTTCTGGATATTGTAATCAGCCAAGGTCCTGCC 15796428 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| ||||| || |||||||| || || | | ||||||||| | || | ||||| || Sbjct 15796427 GTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCCTT 15796368 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCG 33709 ||| ||| || ||| ||| | ||| | |||||| |||| ||||| |||| | Sbjct 15796367 GTCCTGAATCTTGGCTTT-AACGTTGTCGATGGTGTCAGAGCTT---TCCACCTCAAGGG 15796312 Query 33710 TGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || || | ||||| |||||||||||||| Sbjct 15796311 TGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 15796272 >seq3 Length=31725688 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || |||||||| |||| ||| |||||| |||| |||| || Sbjct 11141070 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGC 11141011 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || |||| |||||||| || | || | ||||| ||||| || || Sbjct 11141010 TTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 11140951 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | ||| ||| | ||||||| || || || || | ||||| || || || || Sbjct 11140950 GCCTTGA-CATTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATTGTCTTCCCCGT 11140892 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || ||||||||||| Sbjct 11140891 GAGGGTTTTCACGAAGATCTGCAT 11140868 Score = 86.0 bits (94), Expect = 4e-12 Identities = 154/221 (70%), Gaps = 8/221 (4%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || ||||| || ||||| |||||| || ||||||||||| | | ||||| | Sbjct 13311187 ACGCAAGACCAAGTGAAGAGTTGACTCTTTCTGAATGTTGTAATCCGCCAAGGTGCGACC 13311128 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || ||||| || ||||||||||| ||||| | |||||| || | || | || || || Sbjct 13311127 ATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTT 13311068 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCG 33709 || || || | | ||||| ||| | ||||| ||| || || || | | Sbjct 13311067 ATCCTGGATCTT-GGCCTTAACATTGTCAATAGTGTCAGAGCT---CTCAACCTCCAAAG 13311012 Query 33710 TGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || || || || || || ||||||||||||||| Sbjct 13311011 TGATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATA 13310971 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || ||||| ||||| || ||||| || || | | || || | || || Sbjct 13311409 CACCAGGTGAAGAGTTGATTCTTTCTGGATGTTATAGTCAGCCAAAGTACGACCATCCTC 13311350 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | ||||| || || || |||| | |||||| ||| | || | ||| |||||||| Sbjct 13311349 AAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTG 13311290 Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||||| ||||| | | |||| ||||||| ||||| || | ||||||||| | Sbjct 13311289 GATTTTGGCTTTCA-CGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGTGATCGTCT 13311231 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||||| || || || ||||||||||| Sbjct 13311230 TTCCTGTTAAAGTCTTCACGAAGATCTGCAT 13311200 >seq3787 Length=174 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | |||| || ||||| ||| || || ||||||||||| | | Sbjct 27 CCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCG 86 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | |||| |||| || || ||||| || |||| ||||||||| || |||| Sbjct 87 AGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 146 Query 33643 ACACCTTCTTTGTC 33656 | |||||| ||||| Sbjct 147 ATACCTTCCTTGTC 160 >seq8 Length=21613650 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| |||||||| || ||| | |||| || || |||||||| || | ||| || | | Sbjct 12585007 ACGCAACACCAAGTGGAGATTAGTCTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTACC 12584948 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || |||||||| || ||||| | ||||||||| | || | ||||| || Sbjct 12584947 GTCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGGGAATGCCTTCCTT 12584888 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 || || || ||| | | | ||| | ||||||| |||||| || | |||| Sbjct 12584887 ATCCTGGATCTTGGCTTTGA-CGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGA 12584829 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || | || || || ||||||||||| Sbjct 12584828 TCGTCTTCCCGGTGAGAGTCTTAACGAAGATCTGCAT 12584792 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | || ||| |||||||| || ||||| ||| || || |||||||| || | Sbjct 12585247 ACCTCCACGCAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGC 12585188 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || | || || ||||| || ||||| | |||||| || | || Sbjct 12585187 CAGAGTTCTACCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 12585128 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || ||||| | | ||| | |||||| || | Sbjct 12585127 GATCCCTTCCTTGTCTTGGATCTTGGCTTTCA-CGTTGTCGATTGTGTCGGAACTCTCGA 12585069 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| |||||||| || || || || || || || |||||||||||| Sbjct 12585068 CCTCAAGGGTGATCGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCATA 12585019 >seq4 Length=18984343 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| |||| ||| || | |||| || | || || ||||| || Sbjct 357501 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCGAA 357560 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| |||||||| || |||| | ||||| ||||| || || || | | | Sbjct 357561 GATCAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 357619 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||||| || || || || | ||||| |||||||| |||| ||||| | Sbjct 357620 TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTACCCGTTAGGGTTTTCA 357679 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 357680 CGAAGATCTGCAT 357692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328542759286080