Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq40249 637 5e-178 seq24705 585 3e-162 seq27683 266 4e-66 seq13684 163 3e-35 seq10 120 3e-22 seq34187 114 1e-20 seq3029 113 5e-20 seq38010 91.5 2e-13 >seq40249 Length=153482 Score = 637 bits (706), Expect = 5e-178 Identities = 755/1017 (74%), Gaps = 8/1017 (1%) Strand=Plus/Plus Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438 |||||| | ||||||||||| | | || ||||| || ||||| ||||||||||| Sbjct 31935 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 31994 Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498 || | || |||| ||| ||| | || | || |||||| | || || || || ||| Sbjct 31995 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTGGGGGGTTGGTTCACAGGTACAACCTTT 32054 Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558 | || ||||| || || || | ||||||||||| | |||||| |||||| | Sbjct 32055 GTAACTTCATGGTATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32114 Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618 || || || || || || |||||| || | | | |||||| | | |||| |||||| Sbjct 32115 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32174 Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678 ||||| | ||||| || || || ||||| ||| | || || | ||| | |||||| Sbjct 32175 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTGTT 32234 Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737 |||||||||||||| ||||| | |||||||||||| |||| ||||||||| ||||||| Sbjct 32235 GCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 32294 Query 159738 TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159797 ||| ||| | || ||||| ||||| || || ||||||||||| |||||||||||||| Sbjct 32295 TCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGT 32353 Query 159798 CAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG 159857 || || || || |||||||| ||||| ||| ||||||||||| |||||||| || Sbjct 32354 TTCTGTCTTTCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 32413 Query 159858 GGTAGCAGCAATCTTTAGAT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCT 159914 ||||| || || ||| ||| |||| || |||| ||||||| || || ||||| | Sbjct 32414 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATT 32470 Query 159915 CAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAAT 159974 ||||| || |||||||||||||| |||||| |||| || | || ||||| || || || Sbjct 32471 GAACCCATTTCATATGATGGGAGTCGCTGGTGTACTGGGCGCGGCTCTGTTATGCGCTAT 32530 Query 159975 CCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAA 160034 ||||||||||||||||| || || || ||||||||||| || ||||| ||||| Sbjct 32531 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 32590 Query 160035 GGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160094 || ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| || Sbjct 32591 TGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTG 32650 Query 160095 GTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160154 ||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| || Sbjct 32651 GTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 32710 Query 160155 TGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCT 160214 ||| || || | ||| |||||| || |||| | | ||||| ||||| ||||| Sbjct 32711 TGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCT 32770 Query 160215 TCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274 ||||| || || ||||| ||||| || | ||||| |||||||| ||||||||||| Sbjct 32771 ACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGAC 32830 Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334 ||||| || || || || || || || ||||| |||| ||||||||||| || || Sbjct 32831 TTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGA 32890 Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 ||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| || Sbjct 32891 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 32947 Score = 596 bits (660), Expect = 2e-165 Identities = 738/1007 (73%), Gaps = 2/1007 (0%) Strand=Plus/Minus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 |||||| | ||| |||| || | |||||| | || |||| ||||| ||||| | Sbjct 1343 CTTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1284 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGTTTCATCGTCGCCTTCGTCGCTGCTCC 157794 |||||| ||||| || | | |||||| | ||| || |||| ||| | |||||||| Sbjct 1283 GATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCC 1224 Query 157795 CCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAA 157854 || || || ||||| || || || ||||| ||| |||| || || | || || ||||| Sbjct 1223 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 1164 Query 157855 CATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCAT 157914 || || || ||||| || |||||| ||| || || ||| | || || ||||| || Sbjct 1163 TATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 1104 Query 157915 CTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGT 157974 ||||||||| ||||| |||| || ||||| || ||||||||||||| |||| | || Sbjct 1103 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGT 1044 Query 157975 ATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCG 158034 | ||||| | | || | | |||||||| |||||||||||||| || ||| Sbjct 1043 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 984 Query 158035 TTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGC 158094 | | |||||||| || ||||| ||| |||||||| ||||| || || || || | ||| Sbjct 983 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 924 Query 158095 AGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158154 || ||| | |||| || | |||||||| ||| || |||| ||||||||| || || Sbjct 923 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 864 Query 158155 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158214 |||||||||||| |||| ||| |||||||||| || || |||||||| ||||||||||| Sbjct 863 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 804 Query 158215 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158274 || || ||| | ||||| ||||| |||||||| || || || || |||||||||||| Sbjct 803 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 744 Query 158275 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 158333 | | || ||||| | | | || | ||||| || |||| || || || | | Sbjct 743 TTCTTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 685 Query 158334 GTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCG 158393 |||| | ||||||||||||||||| || |||||||| || || || || || || || | Sbjct 684 GTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 625 Query 158394 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 158453 | || |||||||||||||| ||| |||||||| || ||||| || || |||||| | | Sbjct 624 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 565 Query 158454 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 158513 | || ||||| || || || || ||||| || || | || | || ||||| |||| Sbjct 564 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 505 Query 158514 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 158573 |||| || |||||||| |||||||| || | ||||| |||| || ||||| | || | Sbjct 504 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 445 Query 158574 CCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158633 | ||||| ||| | | ||||| ||| ||||||||||||||||||||||| ||||| | Sbjct 444 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 385 Query 158634 CACACAACTTCCCACTGGATCTTGCTGCTGCTGAGTCTACACCTGTA 158680 | ||||||||||| || || || ||||||| |||| || || || || Sbjct 384 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCATCTATA 338 >seq24705 Length=1162 Score = 585 bits (648), Expect = 3e-162 Identities = 716/973 (74%), Gaps = 3/973 (0%) Strand=Plus/Plus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 ||||||| | ||| |||| || | || ||| | || | || ||||||||||| | Sbjct 190 CTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTT 249 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||| ||||| || | | |||||| ||||| || || |||||||| ||||||| | Sbjct 250 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 308 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || || ||||| || || || || || ||| ||||||| | | ||||| |||| Sbjct 309 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 368 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | || ||||||||||| || | |||| ||| || ||||| | ||||| ||||| | Sbjct 369 ATATTATCTCTGGTGCTATTATCCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 428 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 | |||||||| |||||| |||| |||||| | || || |||||||||| | || | | Sbjct 429 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTG 488 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | |||| | | | || | | |||||||| |||||||||||||| || || Sbjct 489 TTCTACACTCCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 548 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 || | |||||||| || ||||| ||| |||||||| ||||| || || || || | || Sbjct 549 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 608 Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153 | || ||| | | || ||| | |||||||| || || |||| ||||||| | || | Sbjct 609 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 668 Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213 ||||||||||||| |||| ||| |||||||||| || || |||||||| |||||||||| Sbjct 669 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 728 Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273 | || || ||| | ||||| ||||| |||||||| || || || || ||||||||||| Sbjct 729 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 788 Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACG 158333 | | | || ||||| | | || | ||||| ||||||| || || || | | Sbjct 789 GTTCTTTGGTAACTTC-TAGTTTGTCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 847 Query 158334 GTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCG 158393 |||| || || |||||||| ||||| || || || || || || || ||||| || || | Sbjct 848 GTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTG 907 Query 158394 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 158453 | || || ||||||||||| ||| ||||||||||| ||||| || ||||||||| | | Sbjct 908 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 967 Query 158454 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 158513 |||| |||||||| || || ||||||||||| || | || | || ||||| |||| Sbjct 968 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 1027 Query 158514 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 158573 |||| || |||||||| |||||||| || | ||||| |||| ||||| || | || | Sbjct 1028 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 1087 Query 158574 CCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158633 | ||||| ||| | | ||||| ||| |||||||||||||| ||||| || ||||| | Sbjct 1088 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATG 1147 Query 158634 CACACAACTTCCC 158646 | ||||||||||| Sbjct 1148 CTCACAACTTCCC 1160 >seq27683 Length=354 Score = 266 bits (294), Expect = 4e-66 Identities = 270/352 (77%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 159776 CTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCAT 159835 ||||||| |||||||||||||| ||||||||||| ||||||||||| || ||| | Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 159836 GGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGG 159895 |||||||||| || ||||| || |||||||| || ||| ||||| | | ||| | || | Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAG 235 Query 159896 GTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTG 159955 | || || || ||||| | ||||| || ||||||||||||||||| || || |||||| Sbjct 234 GATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGTG 175 Query 159956 GAGCACTGTTGTGTGCAATCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAG 160015 || ||| | || || || ||||| || || ||||| ||||| | ||||| || || | Sbjct 174 CGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGTG 115 Query 160016 AACAAGCAAACACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGG 160075 | ||||| || || || ||| | || ||||||| ||||| |||||||| |||| Sbjct 114 ATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGG 55 Query 160076 TCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAA 160127 ||||||| |||||||| ||||| || ||||| |||||||| ||||| || || Sbjct 54 TCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAA 3 >seq13684 Length=3594 Score = 163 bits (180), Expect = 3e-35 Identities = 192/260 (74%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 160132 TGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGC 160191 ||| | ||||| || ||| | ||||| || || | ||| |||||| |||||||| Sbjct 3 TGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGC 62 Query 160192 ATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCA 160251 | |||| | ||| | ||| | ||||| || || || || ||||| || | ||| Sbjct 63 GTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 122 Query 160252 GCAGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTT 160311 || |||||||||||||||||||| ||||||||||| || || || || || || || || Sbjct 123 GCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATT 182 Query 160312 CGTGCTTGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTA 160371 ||||| ||||||||| || ||||| || |||||||| |||| ||||||||||| || Sbjct 183 CGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTT 242 Query 160372 CTACCTAGAGGTAACGCACT 160391 ||||| | || ||||| || Sbjct 243 CTACCACGTGGAAACGCTCT 262 >seq10 Length=17599535 Score = 120 bits (132), Expect = 3e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 158153 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCAC 158212 |||||||||||||| |||| ||| ||||||||| || || |||||||| ||||||||| Sbjct 16803128 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCAC 16803187 Query 158213 CCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCAT 158272 || || || || | ||||| | ||| |||||| |||| || | || || |||| || Sbjct 16803188 CCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTAT 16803247 Query 158273 GGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTAC 158332 || | | || ||||| | || | |||| || ||| || || ||| | Sbjct 16803248 GGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACGAA 16803307 Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGT 158373 |||||| ||||||||||||||||| || |||||||| || Sbjct 16803308 AGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGT 16803348 >seq34187 Length=13517 Score = 114 bits (126), Expect = 1e-20 Identities = 97/117 (83%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 159673 TTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATT 159732 |||||||||||||||||||| ||||| | |||||||||||| |||| ||||||||| || Sbjct 529 TTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTT 470 Query 159733 GCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGC 159788 ||||| ||| ||| | || ||||| ||||| || || ||||||||||| ||||| Sbjct 469 GCTCGATCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGC 414 >seq3029 Length=7874 Score = 113 bits (124), Expect = 5e-20 Identities = 173/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 159389 TGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 159448 ||||||||||| | | | || || || || ||||| || |||||||| || | || Sbjct 249 TGGATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCT 190 Query 159449 TTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTTATCACGAGTT 159508 |||| ||||||| | || | || |||||| |||| || || |||||| | || || Sbjct 189 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 130 Query 159509 GGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTCACGGCAGCTG 159568 |||| ||||| || | ||||||||||| | |||||| |||||| | || ||||| | Sbjct 129 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAATTTCTTAACCGCAGCAG 70 Query 159569 TCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 159628 | || || ||||| || | | | || ||| | | ||||| ||||| || || | | Sbjct 69 TTTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCCGAAGCAC 10 Query 159629 AAGGCGA 159635 |||| || Sbjct 9 AAGGAGA 3 >seq38010 Length=70015 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 158513 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 158572 ||||| || |||||||| |||||||| || | ||||| |||| || ||||| || || Sbjct 45327 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 45386 Query 158573 ACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGA 158625 || ||||| ||| | | ||||| ||| |||||||||||||||||| |||| Sbjct 45387 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGTATGA 45439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572735704462800