Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq40249 605 3e-168 seq24705 592 2e-164 seq27683 228 1e-54 seq13684 143 3e-29 seq10 105 8e-18 seq3 98.7 1e-15 seq34187 89.7 6e-13 seq38010 82.4 9e-11 >seq40249 Length=153482 Score = 605 bits (670), Expect = 3e-168 Identities = 723/979 (74%), Gaps = 2/979 (0%) Strand=Plus/Minus Query 178888 AATCGTTTGTATGTTGGTTGGTTCGGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACT 178947 || ||| | || |||| ||||| ||||| ||||||| ||||| || | | |||||| Sbjct 1315 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1256 Query 178948 ATCTGTTTCATCGTTGCTTTCGTAGCAGCACCTCCCGTCGATATTGACGGCATCCGTGAA 179007 | ||| || | || ||| | || || ||||| || |||||||| || || |||||| Sbjct 1255 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1196 Query 179008 CCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGT 179067 || || |||| || || | || |||||||| || || || ||||| || | || | | Sbjct 1195 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACT 1136 Query 179068 TCAAACGCAATTGGTCTACACTTCTACCCCATCTGGGAAGCAGCATCACTCGATGAGTGG 179127 || || |||||| | || || ||||| ||||||||||| ||||| | ||||| ||| Sbjct 1135 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1076 Query 179128 CTGTATAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTTCCTTATCGGCATCTATGCC 179187 || || ||||||||||||| |||| | || | ||||| | | || | | Sbjct 1075 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1016 Query 179188 TATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTT 179247 |||||||| ||||||||||||||| || |||||| ||||||||||| ||||| |||| Sbjct 1015 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTT 956 Query 179248 GCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAA 179307 ||||| || || || || || ||||| | ||| || ||| | |||| || | |||||| Sbjct 955 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 896 Query 179308 GGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 179367 || ||| ||||||| ||||||||| || |||||||||||||| |||| ||| ||||| Sbjct 895 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 836 Query 179368 TTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTA 179427 ||||| || || |||||||| ||||||||||| || || ||| | ||||| ||||| ||| Sbjct 835 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 776 Query 179428 TTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTC-G 179486 ||||| || || || || ||||||||| || | | || ||||| | | ||| || | Sbjct 775 TTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACTTC-TAGTTTGATCAG 717 Query 179487 TGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGAC 179546 ||||| || || | || || || | ||||| | ||||| ||||||||||| || Sbjct 716 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAAC 657 Query 179547 CTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTT 179606 || ||||| || || || || || || || || || ||||||||||||||||| || Sbjct 656 TTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 597 Query 179607 TAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTT 179666 ||||| || || ||||| || |||||| | || || |||||||| || || || ||||| Sbjct 596 CAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTT 537 Query 179667 CACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTCAACCAGTC 179726 |||||| | || | || ||||| |||||||| || |||||||| |||||||| || Sbjct 536 TACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 477 Query 179727 CATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAACCGTGCAGG 179786 | |||| ||||||||||||| |||| || ||||| || | | |||||||| Sbjct 476 AGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAA 417 Query 179787 TTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGC 179846 | |||||||||||||||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct 416 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 357 Query 179847 TGCTGAGTCTACACCTGTA 179865 || |||| || || || || Sbjct 356 TGTTGAGGCTCCATCTATA 338 Score = 515 bits (570), Expect = 5e-141 Identities = 702/980 (72%), Gaps = 0/980 (0%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 |||||||| || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 31965 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 32024 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| || || || | ||| Sbjct 32025 TTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCT 32084 Query 180171 TCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCT 180230 ||||||| | |||||| || ||| | || || || || || || |||||| | | Sbjct 32085 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 32144 Query 180231 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGG 180290 | | |||||| | | |||| ||||||||||| | || || |||| || ||| Sbjct 32145 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 32204 Query 180291 TGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGA 180350 || ||| | || || || ||| ||| || |||||||||||||| ||||| |||| || Sbjct 32205 TGTCAATTAGGCGGTCTGTGGGCTTTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGT 32264 Query 180351 TTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATT 180410 |||||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 32265 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATC 32324 Query 180411 GCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAG 180470 |||||||||||||| || ||||| ||||| || ||||| || || ||||| ||||| Sbjct 32325 GCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTTCTAATTTATCCACTAGGTCAA 32384 Query 180471 TCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTT 180530 || ||||||||||||| || |||||| ||||| || || ||| ||||| | |||||| Sbjct 32385 TCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTT 32444 Query 180531 CTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATA 180590 | || || || || || ||||| | ||||| || |||||||||||||| |||||| || Sbjct 32445 TTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCTGGTGTA 32504 Query 180591 CTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAA 180650 || || | || || ||| || || ||||| | ||||| || || || | | |||| Sbjct 32505 CTGGGCGCGGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAA 32564 Query 180651 GATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTAC 180710 ||||| || ||||| || || || ||| | |||| |||| || |||||||| Sbjct 32565 GATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTAT 32624 Query 180711 TCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAG 180770 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 32625 TCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAA 32684 Query 180771 CGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATT 180830 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || || Sbjct 32685 CGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTT 32744 Query 180831 GGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGA 180890 || | | ||||| ||| | ||||| ||||| || || ||||| || || ||| | Sbjct 32745 GGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGT 32804 Query 180891 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGA 180950 ||||| |||||||| || || ||||| ||||| || || || || || || || ||||| Sbjct 32805 GCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGT 32864 Query 180951 CTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAA 181010 | || || ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 32865 ATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 32924 Query 181011 GTTCTACCAAGAGGTAACGC 181030 ||||||||| | || ||||| Sbjct 32925 GTTCTACCACGTGGAAACGC 32944 >seq24705 Length=1162 Score = 592 bits (656), Expect = 2e-164 Identities = 719/973 (74%), Gaps = 5/973 (1%) Strand=Plus/Plus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 |||||| | ||| |||| ||| | |||||| | || | || ||||||||||| || Sbjct 191 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 250 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979 ||||| ||||| || | | |||||| ||||| || || | || ||| | || || || Sbjct 251 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 309 Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039 ||| || |||||||| || || ||||| || || ||||||| | | ||||||||||| Sbjct 310 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 369 Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099 || |||||||||||| || |||| | ||| || || || | ||||| ||||| || Sbjct 370 TATTATCTCTGGTGCTATTATCCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 429 Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159 |||||||| ||||| | ||||||||| | || || |||||||||| | || | || Sbjct 430 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 489 Query 179160 CTTCCACTTCCTTA-TCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACC 179218 | |||| ||||| | || | | |||||||| ||||||||||||||| || || Sbjct 490 TCTACACT-CCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 548 Query 179219 GTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTG 179278 |||| ||||||||||| ||||| ||||||||| || || || || || ||||| | || Sbjct 549 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 608 Query 179279 CAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTA 179338 | || ||| | | || ||| | |||||||| || ||||||| ||||||| | || | Sbjct 609 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 668 Query 179339 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 179398 ||||||||||||| |||| ||| |||||||||| || || |||||||| |||||||||| Sbjct 669 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 728 Query 179399 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACG 179458 | || || ||| | ||||| ||||| |||||||| || || || || ||||||||| | Sbjct 729 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 788 Query 179459 GAAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATG 179518 | | | || |||| || | |||| | ||||| ||||| | || || || | | Sbjct 789 GTTCTTTGGTAACTT-CTAGTTTGTCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 847 Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578 |||| || || || ||||| ||||| || ||||| || || || || ||||| || || | Sbjct 848 GTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTG 907 Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638 | || || |||||||||||||| || |||||||| || ||||| ||||||||| | | Sbjct 908 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 967 Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCA 179698 |||| ||||| || || || ||||||||||||||| | || | || ||||| |||| Sbjct 968 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 1027 Query 179699 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACA 179758 |||| || |||||||| |||||||| || | |||| ||||||| || || |||| | Sbjct 1028 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 1087 Query 179759 CATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACG 179818 | ||||| || | | |||||||| | ||||||||||| ||||| || ||||| | Sbjct 1088 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATG 1147 Query 179819 CACACAACTTCCC 179831 | ||||||||||| Sbjct 1148 CTCACAACTTCCC 1160 >seq27683 Length=354 Score = 228 bits (252), Expect = 1e-54 Identities = 264/353 (75%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 180418 CTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTT 180477 ||||||| || ||||| ||||| ||||| || || || |||||||| || || ||| Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 180478 GGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTC-AG 180536 |||||||||| || |||||| |||||||| || ||| ||||| | || ||||||| | Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCT-TTTCTTCCAA 236 Query 180537 GGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGT 180596 || || || || ||||| | ||||| || ||||||||||||||||| || || ||||| Sbjct 235 GGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGT 176 Query 180597 GGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGA 180656 | || |||||| || || ||||| | || || || ||||| || | ||| || || Sbjct 175 GCGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGT 116 Query 180657 GAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATG 180716 || ||||| ||||| || ||| | |||| |||| || |||||||| || ||| Sbjct 115 GATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATG 56 Query 180717 GTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAA 180769 |||||||| |||||||| ||||| || ||||| ||| |||| ||||| || || Sbjct 55 GTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAA 3 >seq13684 Length=3594 Score = 143 bits (158), Expect = 3e-29 Identities = 186/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 180774 TGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGC 180833 ||| | ||||| || ||| | ||||| || || | ||| |||||| |||||||| Sbjct 3 TGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGC 62 Query 180834 ATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCA 180893 | |||| | ||||| ||| | ||||| || || || || || || ||| | ||| Sbjct 63 GTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 122 Query 180894 GCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTA 180953 || ||||||||||| || ||||| ||||||||||| || || || || || || || | Sbjct 123 GCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATT 182 Query 180954 CGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTT 181013 ||||| ||| ||||| || ||||| || || ||||| | || |||||||| || ||| Sbjct 183 CGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTT 242 Query 181014 CTACCAAGAGGTAACGC 181030 |||||| | || ||||| Sbjct 243 CTACCACGTGGAAACGC 259 >seq10 Length=17599535 Score = 105 bits (116), Expect = 8e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 179338 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCAC 179397 |||||||||||||| |||| ||| ||||||||| || || |||||||| ||||||||| Sbjct 16803128 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCAC 16803187 Query 179398 CCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCAC 179457 || || || || | ||||| | ||| |||||| |||| || | || || |||| | Sbjct 16803188 CCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTAT 16803247 Query 179458 GGAAGTCTCGTTACTTCCTCGCTT-GTTCGTGAAACAACTGAGACAGAGTCACAGAACTA 179516 || | | || |||| || | || || | |||| || | | || || ||| | Sbjct 16803248 GGTTTTTTGGTAACTT-CTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACGA 16803306 Query 179517 TGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGT 179558 |||||| ||||| ||||||||||| || || ||||| || Sbjct 16803307 AAGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGT 16803348 >seq3 Length=31725688 Score = 98.7 bits (108), Expect = 1e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177379 AAGACGATCAGTACATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATATTAATTACTCAT 177438 ||||||| |||||||| | || || |||||||||||||| ||||| | |||||| | Sbjct 11490023 AAGACGACCAGTACATATTGGATGCGGCTGAAGAAGCAGGAGTTGACTTGCCTTACTCTT 11490082 Query 177439 GCCGCGCTGGTGCTTGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTAGTGTAGATCAAA 177498 || | |||||||| ||||| |||| |||||||| | ||||| || || || || Sbjct 11490083 GCAGAGCTGGTGCGTGTTCCACCTGCGCTGGTAATATCGAGAGAGGCCAAGTTGACCAGT 11490142 Query 177499 GCGATCAATCGTTCTTGGATGACGATCAAATGGAGTCAGGATTTATTCTGACCTGTGTGT 177558 ||| ||||| | || || ||||| |||||| ||| | | | |||| |||||| Sbjct 11490143 CTGATGGTTCGTTTCTTGAGGATGATCACATGGAGAAAGGTTATGTCTTGACTTGTGTGG 11490202 Query 177559 CATATCC 177565 | || || Sbjct 11490203 CTTACCC 11490209 >seq34187 Length=13517 Score = 89.7 bits (98), Expect = 6e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 180314 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACT 180373 ||| || |||||||||||||| ||||| |||| || |||||| |||| || |||||||| Sbjct 530 TTTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACT 471 Query 180374 GGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGC 180430 || || | || | || ||||| ||||| || |||||||||||||| || || Sbjct 470 TGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGC 414 >seq38010 Length=70015 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 179698 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAAC 179757 ||||| || |||||||| |||||||| || | |||| ||||||||||||| |||| Sbjct 45327 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 45386 Query 179758 ACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGA 179810 || ||||| || | | |||||||| | ||||||||||||||| |||| Sbjct 45387 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGTATGA 45439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610022535549120